Tag |
Content |
WERAM ID |
WERAM-Arl-0145 |
Ensembl Protein ID |
scaffold_701476.1 |
Gene Name |
ATX4 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HMT |
SET1 |
3.80e-37 |
127.7 |
221 |
998 |
Me_Reader |
PHD |
4.10e-10 |
40.4 |
395 |
729 |
|
Organism |
Arabidopsis lyrata |
Domain Profile |
HMT SET1
SET1.txt 65 vvvdatkkgniarfinhscepNceakvv 92 +v+d+++++ ++ +sc p + + v+ scaffold_701476.1 221 IVIDPMTQAP--ELVLRSCIPDAACVVF 246 7999988876..58999**999999875 PP SET1.txt 3 levakskikglglvakkeiekeelviEYvGevirsevadkrekeyekkeigvylfrldedaevvvdatkkgniarfinhscepNceakvvav 94 + + +s i+g+gl+a ++i+++e+v EY+Ge +r ++ad re++y + + +ylf++ e+ vvvdat kgniar+inhsc+pNc+a++++v scaffold_701476.1 884 VCFGRSGIHGWGLFARRNIQEGEMVLEYRGEQVRGSIADLREARYRRVGKDCYLFKISEE--VVVDATDKGNIARLINHSCTPNCYARIMSV 973 77889*******************************************************..*****************************9 PP SET1.txt 95 .dgekkiviyakraIekgeeltydY 118 d+e +iv++ak +++ geeltydY scaffold_701476.1 974 gDEESRIVLIAKANVAVGEELTYDY 998 56679******************** PP
Me_Reader PHD
PHD.txt 2 tiClvCg..kddegekemvqCdeCddwfHlkCvklplsslpeg..kswyCpsCke 52 iC +C+ +++ +++ +v Cd+C+ w+H++C +++ ++l++ +++yCp+C++ scaffold_701476.1 395 HICGICKkiRNHLDSQSWVRCDGCKIWIHAECDQISDKHLKDLgeTDYYCPTCRA 449 69****63545555666*******************66666334568******96 PP PHD.txt 3 iClvCg.kddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 C vC+ +d++ ++++ C+ C+ ++H++C++ ++ + +sw+C+ C++ scaffold_701476.1 590 RCAVCRwVEDWDYNKIIICNRCQIAVHQECYGAR--HVRDFTSWVCKACER 638 7****8656666666*******************..9998889******85 PP PHD.txt 25 dwfHlkCvk 33 w+H++C scaffold_701476.1 663 LWVHVTCAW 671 599999975 PP PHD.txt 2 tiClvCgkddegekemvqCdeCddwfHlkCvkl 34 +iC++C k+ +g+ + qC +C++ +H+ C + scaffold_701476.1 700 KICVIC-KQIHGS--CTQCCKCSTYYHAMCASR 729 79****.666664..89*************875 PP
|
Protein Sequence (Fasta) | MIIKRKFKTQ IPSLHHSGNE SRKKRKSNLG GCYYPLNLLG EIAAGIVPGN GRNGFSASWC 60 NEVSCSMKPV EVEELISKRR SDSGAVRDPP PAEVSRPPLV RTSRGRIQVL PSRFNDSVLD 120 NWRKDSKSDC DLEEELECRD DKVVSFRVPK ASNLKSKELY RNSKYSALCK EARFHEQRNE 180 ARARVDEKLP NKQGTFGPEN FYSGDLVWAK SGRNEPFWPA IVIDPMTQAP ELVLRSCIPD 240 AACVVFFGHS GNENERDYAW VRRGMIFPFV DYVARFQEQS ELQGCKPGNF QMALEEAFLA 300 DQGFTEKLMH DIHLAAGNPT FDDSFYRWIQ ETAVSNQDLN NNAPTQGLLK KHRNPLACAG 360 CETVISSEMA KKMKALIPGD QLLCKPCSRL TKSKHICGIC KKIRNHLDSQ SWVRCDGCKI 420 WIHAECDQIS DKHLKDLGET DYYCPTCRAK FNFDLSDSEK QNSKSKLGKG DGQMVLPDKV 480 IVVCAGVEGV YFPRLHLVVC KCGSCGPKKK ALSEWERHTG SKSKNWKTSV KVKSSMLALE 540 DWMMKLAELH ANATAAKVPK RPSIKQRKQR LLAFLSETYE PVNAKWTTER CAVCRWVEDW 600 DYNKIIICNR CQIAVHQECY GARHVRDFTS WVCKACERPD IKRECCLCPV KGGALKPTDV 660 ETLWVHVTCA WFQPEVCFAS EEKMEPAVGI LSIPSTNFVK ICVICKQIHG SCTQCCKCST 720 YYHAMCASRA GYRMELHCLE KNGQQITKMV SYCAYHRAPN PDNVLIIQTP SGAFSAKSLV 780 QNKKKGGSRL ISSIREDNEE SPAEDTITRD PFSAARCRVF KRKINSKKRI EEEAIPHHTR 840 GPRHHPSAAI QTLNTFRHVP EEPKSFSSFR ERLHHLQRTE MDRVCFGRSG IHGWGLFARR 900 NIQEGEMVLE YRGEQVRGSI ADLREARYRR VGKDCYLFKI SEEVVVDATD KGNIARLINH 960 SCTPNCYARI MSVGDEESRI VLIAKANVAV GEELTYDYLF DPDEAEELKV PCLCKAPNCR 1020 KFMN 1024Protein Fasta Sequence
>scaffold_701476.1|PHD|Arabidopsis lyrata MIIKRKFKTQIPSLHHSGNESRKKRKSNLGGCYYPLNLLGEIAAGIVPGNGRNGFSASWCNEVSCSMKPVEVEELISKRRSDSGAVRDPPPAEVSRPPLVRTSRGRIQVLPSRFNDSVLDNWRKDSKSDCDLEEELECRDDKVVSFRVPKASNLKSKELYRNSKYSALCKEARFHEQRNEARARVDEKLPNKQGTFGPENFYSGDLVWAKSGRNEPFWPAIVIDPMTQAPELVLRSCIPDAACVVFFGHSGNENERDYAWVRRGMIFPFVDYVARFQEQSELQGCKPGNFQMALEEAFLADQGFTEKLMHDIHLAAGNPTFDDSFYRWIQETAVSNQDLNNNAPTQGLLKKHRNPLACAGCETVISSEMAKKMKALIPGDQLLCKPCSRLTKSKHICGICKKIRNHLDSQSWVRCDGCKIWIHAECDQISDKHLKDLGETDYYCPTCRAKFNFDLSDSEKQNSKSKLGKGDGQMVLPDKVIVVCAGVEGVYFPRLHLVVCKCGSCGPKKKALSEWERHTGSKSKNWKTSVKVKSSMLALEDWMMKLAELHANATAAKVPKRPSIKQRKQRLLAFLSETYEPVNAKWTTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARHVRDFTSWVCKACERPDIKRECCLCPVKGGALKPTDVETLWVHVTCAWFQPEVCFASEEKMEPAVGILSIPSTNFVKICVICKQIHGSCTQCCKCSTYYHAMCASRAGYRMELHCLEKNGQQITKMVSYCAYHRAPNPDNVLIIQTPSGAFSAKSLVQNKKKGGSRLISSIREDNEESPAEDTITRDPFSAARCRVFKRKINSKKRIEEEAIPHHTRGPRHHPSAAIQTLNTFRHVPEEPKSFSSFRERLHHLQRTEMDRVCFGRSGIHGWGLFARRNIQEGEMVLEYRGEQVRGSIADLREARYRRVGKDCYLFKISEEVVVDATDKGNIARLINHSCTPNCYARIMSVGDEESRIVLIAKANVAVGEELTYDYLFDPDEAEELKVPCLCKAPNCRKFMN
|
Nucleotide Sequence (Fasta) | TGAATTTTTA TAAGAAAGAG AATGATAATC AAACGGAAAT TTAAAACCCA GATACCGAGT 60 TTGCACCACT CGGGCAATGA GTCCAGAAAG AAGAGAAAGT CGAACTTGGG AGGTTGTTAC 120 TATCCTCTCA ATCTTCTCGG AGAAATCGCC GCCGGGATTG TTCCAGGAAA TGGACGGAAT 180 GGATTCTCTG CTTCCTGGTG CAATGAAGTT TCCTGTTCGA TGAAACCTGT TGAGGTTGAA 240 GAGTTGATTT CTAAGAGAAG ATCCGATTCC GGCGCTGTGA GGGATCCTCC TCCGGCTGAA 300 GTCTCACGCC CACCGCTTGT TCGAACATCT AGGGGACGAA TTCAGGTGCT TCCTTCTCGA 360 TTCAATGATT CGGTGCTCGA TAATTGGAGG AAAGATAGCA AAAGTGATTG TGATTTGGAG 420 GAAGAACTAG AATGCAGGGA TGATAAAGTT GTTAGTTTTC GGGTTCCTAA AGCTAGTAAT 480 TTGAAAAGCA AGGAACTTTA TAGGAACAGT AAGTATAGTG CATTGTGTAA AGAAGCAAGG 540 TTTCACGAGC AACGTAATGA GGCTCGTGCT CGTGTTGATG AGAAGCTTCC AAATAAACAA 600 GGTACTTTTG GGCCTGAGAA CTTCTATTCA GGTGACTTGG TTTGGGCAAA GTCTGGGAGA 660 AATGAGCCGT TTTGGCCTGC CATTGTTATC GATCCAATGA CACAAGCACC CGAGCTTGTT 720 TTGCGTTCTT GTATACCCGA TGCTGCCTGT GTTGTCTTCT TTGGCCACTC TGGGAACGAG 780 AATGAAAGGG ACTATGCATG GGTGAGGAGA GGGATGATCT TCCCTTTTGT GGATTATGTT 840 GCCAGGTTCC AGGAACAGTC TGAACTGCAA GGTTGCAAGC CTGGGAATTT TCAGATGGCA 900 CTGGAGGAAG CATTTTTGGC AGATCAGGGA TTCACGGAGA AGTTGATGCA TGATATTCAC 960 TTGGCTGCTG GCAACCCGAC TTTTGATGAT TCTTTCTACA GATGGATTCA AGAAACTGCG 1020 GTCTCAAATC AGGATCTCAA TAACAATGCT CCAACCCAGG GGCTGTTAAA GAAACACAGA 1080 AATCCACTAG CATGTGCAGG ATGTGAAACG GTCATTTCTT CTGAGATGGC AAAAAAAATG 1140 AAAGCTCTGA TTCCTGGAGA TCAGTTGTTG TGTAAACCAT GTTCAAGGTT AACAAAATCA 1200 AAACACATTT GTGGTATATG CAAGAAGATA AGGAATCATT TGGACAGTCA AAGCTGGGTG 1260 CGCTGTGATG GTTGTAAAAT CTGGATACAC GCAGAGTGTG ACCAAATATC AGATAAGCAT 1320 TTGAAGGATT TGGGGGAAAC AGATTACTAC TGTCCTACTT GCAGAGCTAA ATTTAACTTT 1380 GACCTATCAG ATTCAGAAAA ACAAAACTCA AAGTCAAAAC TTGGCAAAGG CGATGGTCAG 1440 ATGGTTCTTC CTGACAAGGT TATTGTTGTA TGCGCTGGAG TAGAAGGAGT TTATTTTCCG 1500 AGGCTCCATT TAGTGGTATG TAAGTGTGGC TCCTGTGGAC CCAAAAAGAA AGCCCTTAGC 1560 GAATGGGAAA GACATACCGG ATCAAAGTCA AAAAATTGGA AGACCAGTGT GAAAGTCAAA 1620 AGCTCGATGC TGGCACTAGA AGATTGGATG ATGAAATTAG CAGAGTTACA TGCAAATGCT 1680 ACTGCAGCTA AAGTGCCTAA ACGACCTTCC ATAAAGCAGA GAAAGCAGAG ATTGCTTGCT 1740 TTTCTATCAG AGACATATGA GCCGGTTAAT GCGAAGTGGA CAACAGAACG ATGTGCAGTT 1800 TGCAGATGGG TTGAAGATTG GGACTACAAC AAGATTATTA TCTGCAACAG ATGCCAAATA 1860 GCAGTGCATC AGGAATGCTA TGGCGCTAGA CATGTGCGTG ATTTCACCTC ATGGGTCTGT 1920 AAAGCATGTG AGAGACCAGA TATTAAGCGG GAGTGTTGCC TCTGCCCTGT AAAAGGAGGT 1980 GCATTGAAGC CAACTGATGT GGAAACGTTG TGGGTTCATG TGACATGTGC TTGGTTTCAG 2040 CCTGAAGTAT GTTTTGCAAG TGAGGAAAAA ATGGAACCTG CAGTTGGGAT TTTGAGTATT 2100 CCATCAACTA ATTTTGTGAA GATATGTGTA ATATGCAAAC AAATACATGG CTCGTGTACT 2160 CAGTGTTGCA AGTGTTCTAC ATACTATCAT GCCATGTGTG CCTCCCGAGC TGGTTATAGA 2220 ATGGAGTTGC ACTGCTTGGA GAAAAATGGT CAGCAGATTA CAAAGATGGT GTCCTATTGT 2280 GCTTATCACA GGGCTCCAAA CCCAGATAAC GTGTTAATTA TACAAACTCC TTCAGGGGCA 2340 TTCTCTGCAA AGAGTCTTGT CCAAAACAAA AAGAAAGGTG GTTCCAGACT TATTTCATCA 2400 ATCAGAGAAG ACAATGAAGA GTCACCTGCA GAGGATACCA TTACACGTGA TCCATTTTCT 2460 GCTGCTCGTT GTCGAGTATT TAAAAGAAAG ATCAATAGCA AGAAGAGGAT TGAAGAAGAA 2520 GCCATTCCTC ACCACACAAG GGGACCACGC CATCATCCAT CAGCAGCAAT CCAAACTCTA 2580 AACACATTCA GACATGTGCC GGAAGAACCA AAATCGTTTT CTTCTTTCAG GGAACGACTT 2640 CACCACTTGC AGAGGACAGA AATGGATCGG GTCTGCTTTG GGCGATCTGG AATACATGGA 2700 TGGGGTCTTT TTGCAAGAAG AAATATCCAA GAAGGAGAAA TGGTTCTTGA ATATAGAGGG 2760 GAACAGGTGA GAGGTAGCAT TGCAGACTTG AGAGAAGCAC GGTATCGCAG AGTAGGGAAG 2820 GATTGCTATC TTTTCAAGAT CAGTGAAGAA GTAGTGGTTG ATGCTACAGA TAAAGGGAAT 2880 ATAGCTCGAC TCATCAACCA TTCGTGTACG CCAAATTGCT ATGCGAGGAT TATGAGTGTG 2940 GGAGATGAGG AAAGCAGGAT TGTCCTGATA GCCAAGGCCA ATGTAGCTGT GGGAGAGGAG 3000 TTAACGTATG ATTACTTATT TGATCCAGAT GAGGCAGAGG AACTCAAGGT GCCATGCCTA 3060 TGTAAAGCCC CCAACTGCAG GAAATTCATG AATTAGAATA GAAAACCTTA TTGTAGGGTC 3120 T
3122Nucleotide Fasta Sequence
>scaffold_701476.1|PHD|Arabidopsis lyrata TGAATTTTTATAAGAAAGAGAATGATAATCAAACGGAAATTTAAAACCCAGATACCGAGTTTGCACCACTCGGGCAATGAGTCCAGAAAGAAGAGAAAGTCGAACTTGGGAGGTTGTTACTATCCTCTCAATCTTCTCGGAGAAATCGCCGCCGGGATTGTTCCAGGAAATGGACGGAATGGATTCTCTGCTTCCTGGTGCAATGAAGTTTCCTGTTCGATGAAACCTGTTGAGGTTGAAGAGTTGATTTCTAAGAGAAGATCCGATTCCGGCGCTGTGAGGGATCCTCCTCCGGCTGAAGTCTCACGCCCACCGCTTGTTCGAACATCTAGGGGACGAATTCAGGTGCTTCCTTCTCGATTCAATGATTCGGTGCTCGATAATTGGAGGAAAGATAGCAAAAGTGATTGTGATTTGGAGGAAGAACTAGAATGCAGGGATGATAAAGTTGTTAGTTTTCGGGTTCCTAAAGCTAGTAATTTGAAAAGCAAGGAACTTTATAGGAACAGTAAGTATAGTGCATTGTGTAAAGAAGCAAGGTTTCACGAGCAACGTAATGAGGCTCGTGCTCGTGTTGATGAGAAGCTTCCAAATAAACAAGGTACTTTTGGGCCTGAGAACTTCTATTCAGGTGACTTGGTTTGGGCAAAGTCTGGGAGAAATGAGCCGTTTTGGCCTGCCATTGTTATCGATCCAATGACACAAGCACCCGAGCTTGTTTTGCGTTCTTGTATACCCGATGCTGCCTGTGTTGTCTTCTTTGGCCACTCTGGGAACGAGAATGAAAGGGACTATGCATGGGTGAGGAGAGGGATGATCTTCCCTTTTGTGGATTATGTTGCCAGGTTCCAGGAACAGTCTGAACTGCAAGGTTGCAAGCCTGGGAATTTTCAGATGGCACTGGAGGAAGCATTTTTGGCAGATCAGGGATTCACGGAGAAGTTGATGCATGATATTCACTTGGCTGCTGGCAACCCGACTTTTGATGATTCTTTCTACAGATGGATTCAAGAAACTGCGGTCTCAAATCAGGATCTCAATAACAATGCTCCAACCCAGGGGCTGTTAAAGAAACACAGAAATCCACTAGCATGTGCAGGATGTGAAACGGTCATTTCTTCTGAGATGGCAAAAAAAATGAAAGCTCTGATTCCTGGAGATCAGTTGTTGTGTAAACCATGTTCAAGGTTAACAAAATCAAAACACATTTGTGGTATATGCAAGAAGATAAGGAATCATTTGGACAGTCAAAGCTGGGTGCGCTGTGATGGTTGTAAAATCTGGATACACGCAGAGTGTGACCAAATATCAGATAAGCATTTGAAGGATTTGGGGGAAACAGATTACTACTGTCCTACTTGCAGAGCTAAATTTAACTTTGACCTATCAGATTCAGAAAAACAAAACTCAAAGTCAAAACTTGGCAAAGGCGATGGTCAGATGGTTCTTCCTGACAAGGTTATTGTTGTATGCGCTGGAGTAGAAGGAGTTTATTTTCCGAGGCTCCATTTAGTGGTATGTAAGTGTGGCTCCTGTGGACCCAAAAAGAAAGCCCTTAGCGAATGGGAAAGACATACCGGATCAAAGTCAAAAAATTGGAAGACCAGTGTGAAAGTCAAAAGCTCGATGCTGGCACTAGAAGATTGGATGATGAAATTAGCAGAGTTACATGCAAATGCTACTGCAGCTAAAGTGCCTAAACGACCTTCCATAAAGCAGAGAAAGCAGAGATTGCTTGCTTTTCTATCAGAGACATATGAGCCGGTTAATGCGAAGTGGACAACAGAACGATGTGCAGTTTGCAGATGGGTTGAAGATTGGGACTACAACAAGATTATTATCTGCAACAGATGCCAAATAGCAGTGCATCAGGAATGCTATGGCGCTAGACATGTGCGTGATTTCACCTCATGGGTCTGTAAAGCATGTGAGAGACCAGATATTAAGCGGGAGTGTTGCCTCTGCCCTGTAAAAGGAGGTGCATTGAAGCCAACTGATGTGGAAACGTTGTGGGTTCATGTGACATGTGCTTGGTTTCAGCCTGAAGTATGTTTTGCAAGTGAGGAAAAAATGGAACCTGCAGTTGGGATTTTGAGTATTCCATCAACTAATTTTGTGAAGATATGTGTAATATGCAAACAAATACATGGCTCGTGTACTCAGTGTTGCAAGTGTTCTACATACTATCATGCCATGTGTGCCTCCCGAGCTGGTTATAGAATGGAGTTGCACTGCTTGGAGAAAAATGGTCAGCAGATTACAAAGATGGTGTCCTATTGTGCTTATCACAGGGCTCCAAACCCAGATAACGTGTTAATTATACAAACTCCTTCAGGGGCATTCTCTGCAAAGAGTCTTGTCCAAAACAAAAAGAAAGGTGGTTCCAGACTTATTTCATCAATCAGAGAAGACAATGAAGAGTCACCTGCAGAGGATACCATTACACGTGATCCATTTTCTGCTGCTCGTTGTCGAGTATTTAAAAGAAAGATCAATAGCAAGAAGAGGATTGAAGAAGAAGCCATTCCTCACCACACAAGGGGACCACGCCATCATCCATCAGCAGCAATCCAAACTCTAAACACATTCAGACATGTGCCGGAAGAACCAAAATCGTTTTCTTCTTTCAGGGAACGACTTCACCACTTGCAGAGGACAGAAATGGATCGGGTCTGCTTTGGGCGATCTGGAATACATGGATGGGGTCTTTTTGCAAGAAGAAATATCCAAGAAGGAGAAATGGTTCTTGAATATAGAGGGGAACAGGTGAGAGGTAGCATTGCAGACTTGAGAGAAGCACGGTATCGCAGAGTAGGGAAGGATTGCTATCTTTTCAAGATCAGTGAAGAAGTAGTGGTTGATGCTACAGATAAAGGGAATATAGCTCGACTCATCAACCATTCGTGTACGCCAAATTGCTATGCGAGGATTATGAGTGTGGGAGATGAGGAAAGCAGGATTGTCCTGATAGCCAAGGCCAATGTAGCTGTGGGAGAGGAGTTAACGTATGATTACTTATTTGATCCAGATGAGGCAGAGGAACTCAAGGTGCCATGCCTATGTAAAGCCCCCAACTGCAGGAAATTCATGAATTAGAATAGAAAACCTTATTGTAGGGTCT
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |