WERAM Information

Tag Content
WERAM ID WERAM-Arl-0112
Ensembl Protein ID fgenesh2_kg.8__2005__AT5G60410.5
Gene Name ATSIZ1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh2_kg.8__2005__AT5G60410.5 fgenesh2_kg.8__2005__AT5G60410.5 fgenesh2_kg.8__2005__AT5G60410.5
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.20e-07 32.5 114 406
Organism Arabidopsis lyrata
Domain Profile
  Me_Reader PHD
                           PHD.txt   3 iClvCgkddegekemvqCde..CddwfHlkCvklplsslpeg.....kswyCpsCk 51 
                                        C+ Cg++ e ++ m+qC+   C+ w H+ Cv lp +++  g     +s+yC+ C+
  fgenesh2_kg.8__2005__AT5G60410.5 114 RCV-CGNSLETDS-MIQCEDprCHVWQHVGCVILPDKPMD-GnpplpESFYCEICR 166
                                       698.*87777766.*********************44444.34688888******8 PP
                           PHD.txt  27 fHlkCvklp..lsslpegkswyCpsCk 51 
                                       +H+ C +l    +  + +++w Cp C 
  fgenesh2_kg.8__2005__AT5G60410.5 380 VHMGCFDLDvfVELNQRSRKWQCPICL 406
                                       8******9975333333368******6 PP
Protein Sequence
(Fasta)		MDLEATCKDK LSYFRIKELK DVLTQLGLSK QGKKQELVDR ILTLLSDEQA AKVWSKKNTV 60
AKEEVAKLVD DTYRKMQVSG ASDLASKGQV SSDTSNLKVK GEPEDPFQPE IKVRCVCGNS 120
LETDSMIQCE DPRCHVWQHV GCVILPDKPM DGNPPLPESF YCEICRLTRA DPFWVTVAHP 180
LCPVRLTATT IPNDGTNTMQ SVERTFQITR ADKDLLAKQE YDVQAWCMLL NDKVLFRMQW 240
PQYADLQVNG LPVRAINRPG SQLLGVNGRD DGPIITPCIR DGVNRISLSG GDVRIFCFGV 300
RLVKRRTLQQ VLNLIPEEGK GETFEDALAR VRRCIGGGGG DDNADSDSDI EVVADFFGVN 360
LRCPMSGSRI KVAGRFLPCV HMGCFDLDVF VELNQRSRKW QCPICLKNYS VEHVIIDPYF 420
NRITSEMKHC DEEVTEIEVK PDGSWRVKSK RESERRELGE LSQWHAPDGS LYPSAVDIKR 480
KMEMLPVKQE GFSDGPAPLK LGIRKNRNGI WEVSKPNTNG LSSSNRQEKV GYQEKNVIPM 540
SSSATGSGRD GDDASVNQDA IGTFDFVANG MELDSISMNV DSGYNFPDRN QSGEGGNNEV 600
IVLSDSDDEN DVVITPGPAY SGCQTDGGLT FPLNPSGIIN SYNEDPHNIA GGSSRLGLFN 660
DDDEFDTPLW SFPSETPEAP GFQLFRSDAD VSEGLVGLHN HGPLNCAPEI NGGYTMAPET 720
SMASVPVVPG SAGRSEANDG LVDNPLAFGR DDPSLQIFLP TKPDASAQSG FKNQADMSNG 780
IRSEDWISLR LGDSASGNHR VPATANGVSS SQQMSPREGS LDTTTDTASL LLGMNGSRQD 840
KAKKQRSDNP FSFPRQKRSV RPRMFLSIDS DSETMNGIIR QDTGGYQDLL DSLCAGKN 898
Nucleotide Sequence
(Fasta)		AAAATCTTAT CAAAGCTGTG AAAACCCTAG TTTCCAATCC TCTCATTAAT CTATCAGTTT 60
CCGATTTCAT GATCGGGTGC TGTATATGGA GACTAATTGC TGGAGTTTAG GTTCGTCTGT 120
TTTGAACTGA GCTTTTGGTT CTTGTTTGTC TGCTGTTGAA GACATGGATT TGGAAGCTAC 180
TTGTAAGGAT AAACTTTCAT ATTTTCGGAT AAAAGAGCTC AAGGATGTGC TCACTCAGCT 240
GGGACTTTCG AAACAGGGAA AGAAGCAGGA ACTTGTCGAC CGGATCTTAA CCCTTCTTTC 300
TGATGAACAA GCTGCCAAGG TGTGGTCTAA AAAGAATACA GTGGCAAAGG AAGAAGTTGC 360
AAAATTAGTG GACGATACAT ATAGGAAAAT GCAAGTATCT GGGGCAAGTG ATTTAGCATC 420
AAAAGGACAA GTAAGTTCAG ATACCAGTAA TCTGAAAGTT AAGGGGGAGC CTGAAGATCC 480
CTTTCAACCA GAAATTAAAG TTCGATGTGT TTGTGGGAAT TCACTAGAAA CAGACTCAAT 540
GATACAGTGT GAGGATCCAA GATGCCATGT TTGGCAGCAT GTTGGCTGTG TTATTCTCCC 600
AGATAAGCCA ATGGATGGGA ATCCACCACT TCCAGAATCA TTTTATTGTG AAATCTGCCG 660
ACTTACTCGA GCTGACCCGT TTTGGGTTAC AGTGGCACAT CCACTCTGTC CAGTGAGGCT 720
GACTGCGACG ACTATCCCAA ATGATGGTAC GAACACAATG CAGAGTGTGG AGAGAACATT 780
TCAAATCACA AGGGCAGACA AGGACCTGTT GGCCAAACAA GAGTACGATG TTCAGGCTTG 840
GTGTATGCTC TTGAATGACA AAGTTCTCTT TAGGATGCAG TGGCCTCAGT ATGCTGATCT 900
GCAGGTCAAT GGTTTGCCTG TACGTGCAAT TAATCGACCT GGATCACAGC TTTTGGGAGT 960
CAACGGCCGC GACGATGGAC CTATTATCAC ACCTTGTATT AGGGATGGAG TTAACAGAAT 1020
ATCCTTAAGT GGAGGTGACG TTCGGATTTT TTGTTTTGGA GTTAGACTTG TGAAGCGCAG 1080
GACTCTACAA CAGGTTCTAA ATTTGATTCC AGAAGAGGGT AAAGGGGAGA CTTTTGAAGA 1140
TGCTCTTGCA CGAGTCCGCC GATGCATTGG AGGTGGAGGT GGAGATGATA ATGCCGACAG 1200
TGATAGTGAC ATTGAAGTTG TTGCTGATTT CTTTGGTGTC AATCTTCGGT GCCCTATGAG 1260
CGGTTCTAGG ATAAAAGTTG CTGGGAGATT TTTACCCTGT GTGCACATGG GCTGTTTTGA 1320
CCTTGATGTG TTTGTGGAGT TGAATCAACG TTCCAGAAAG TGGCAATGCC CTATTTGTCT 1380
GAAGAACTAC TCAGTGGAGC ATGTAATCAT CGATCCTTAT TTTAACCGTA TCACGTCTGA 1440
GATGAAGCAT TGTGATGAAG AGGTGACTGA AATTGAAGTG AAACCTGATG GTTCTTGGCG 1500
TGTAAAGTCC AAAAGAGAGA GTGAGCGAAG GGAACTGGGG GAACTCTCAC AGTGGCACGC 1560
ACCAGATGGT AGTCTTTACC CCTCTGCTGT TGATATTAAA CGGAAGATGG AAATGTTACC 1620
GGTTAAGCAA GAAGGTTTCT CAGATGGCCC GGCCCCTCTA AAACTTGGAA TAAGGAAAAA 1680
TCGTAATGGC ATTTGGGAAG TTAGCAAACC TAATACAAAT GGATTATCTT CCAGTAATAG 1740
GCAAGAAAAG GTTGGGTATC AGGAGAAAAA TGTTATACCA ATGAGTAGTA GTGCTACTGG 1800
AAGTGGTAGG GATGGTGATG ATGCAAGCGT AAACCAGGAT GCTATTGGAA CTTTTGACTT 1860
TGTAGCCAAC GGCATGGAAC TTGATTCCAT TTCCATGAAT GTTGATTCGG GTTATAACTT 1920
TCCTGACAGA AACCAATCTG GAGAGGGTGG AAATAATGAA GTCATCGTTC TGAGTGATTC 1980
TGATGACGAG AATGATGTAG TAATCACTCC AGGGCCTGCA TACAGTGGTT GTCAAACAGA 2040
TGGTGGGCTT ACTTTTCCAC TGAACCCTTC TGGAATAATT AACTCATATA ATGAGGACCC 2100
ACACAACATA GCTGGGGGAA GTTCACGCTT AGGTCTTTTC AATGATGATG ACGAATTTGA 2160
TACGCCCCTT TGGTCATTTC CTTCTGAAAC TCCAGAAGCC CCTGGGTTCC AGCTATTTAG 2220
ATCTGATGCT GACGTTTCAG AAGGTTTAGT TGGTTTGCAT AATCATGGTC CACTAAACTG 2280
TGCTCCTGAA ATAAATGGAG GTTACACCAT GGCTCCTGAG ACATCAATGG CATCTGTTCC 2340
TGTGGTTCCT GGCTCGGCTG GACGATCTGA AGCAAACGAT GGCCTAGTTG ACAATCCTCT 2400
TGCATTTGGT AGAGACGATC CCTCACTTCA AATATTTTTG CCAACAAAAC CAGATGCCTC 2460
AGCTCAGTCG GGTTTTAAAA ACCAAGCTGA TATGTCAAAT GGTATCCGCA GTGAAGACTG 2520
GATCTCGCTT AGGCTAGGTG ATAGCGCTTC TGGGAATCAT CGAGTTCCTG CAACTGCAAA 2580
CGGGGTTAGC TCAAGCCAGC AGATGTCTCC AAGGGAAGGT TCTTTGGATA CTACAACAGA 2640
CACTGCGTCG TTGCTTCTGG GTATGAATGG CAGTAGGCAA GACAAGGCAA AGAAGCAAAG 2700
ATCAGATAAT CCATTTTCAT TTCCTCGGCA GAAGCGTTCT GTAAGACCTC GGATGTTCCT 2760
CTCCATTGAC TCGGATTCTG AAACAATGAA CGGGATCATC AGACAAGACA CCGGAGGTTA 2820
CCAAGATTTG CTTGATTCTC TCTGTGCAGG CAAGAATTGA ACCGGATGTA GTTTGGCAAA 2880
AGCAATGCAC TGGCTGATTT AGTTACTCTG ATAGGCAAGA AAAGTGGGGA CAGTGGGTTC 2940
CGGTTTAATT AATTAGTAAT TTGTATACTC GAATAGGTTT TTTTTTTGTG GACGATGATA 3000
AAATTACTTC GAAGCCAGGA GGAGCTATAG AGAGATATAG CAATGTAAAT TATGGGCTCC 3060
AATTTTTATT TATTTATTAT AAAAA 3086
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Art-0145 AT5G60410.1 Arabidopsis thaliana 95 0.0 1623
WERAM-Brr-0105 Bra020249.1-P Brassica rapa 81 0.0 1336
WERAM-Viv-0034 VIT_06s0004g03180.t01 Vitis vinifera 65 0.0 1078
WERAM-Glm-0141 GLYMA12G07590.1 Glycine max 65 0.0 1049
WERAM-Met-0101 AES88651 Medicago truncatula 63 0.0 1047
WERAM-Sol-0139 Solyc11g069160.1.1 Solanum lycopersicum 62 0.0 1033
WERAM-Org-0050 ORGLA05G0017700.1 Oryza glaberrima 52 0.0 816
WERAM-Orp-0048 OPUNC05G02000.1 Oryza punctata 52 0.0 806
WERAM-Mua-0008 GSMUA_Achr10P13170_001 Musa acuminata 53 0.0 803
WERAM-Orr-0050 ORUFI05G01890.1 Oryza rufipogon 52 0.0 795
WERAM-Orni-0108 ONIVA10G12200.1 Oryza nivara 52 0.0 794
WERAM-Orb-0050 OBART05G01770.1 Oryza barthii 52 0.0 789
WERAM-Orl-0083 KN539825.1_FGP005 Oryza longistaminata 52 0.0 786
WERAM-Tru-0081 TRIUR3_29937-P1 Triticum urartu 48 2e-175 613
WERAM-Tra-0179 Traes_5AL_F340B783A.1 Triticum aestivum 48 6e-173 605
WERAM-Hov-0075 MLOC_60545.2 Hordeum vulgare 48 3e-169 593
WERAM-Aet-0041 EMT28925 Aegilops tauschii 47 1e-166 584
WERAM-Php-0135 PP1S94_39V6.1 Physcomitrella patens 39 8e-144 508
WERAM-Sem-0107 EFJ20543 Selaginella moellendorffii 45 1e-140 498
WERAM-Orgl-0049 OGLUM05G01840.1 Oryza glumaepatula 46 1e-121 435
WERAM-Zem-0086 GRMZM2G155123_P01 Zea mays 60 2e-114 410
WERAM-Sot-0100 PGSC0003DMT400088246 Solanum tuberosum 46 8e-76 283
WERAM-Brd-0102 BRADI4G26730.1 Brachypodium distachyon 54 9e-27 119
WERAM-Scp-0049 SPCC645.13.1:pep Schizosaccharomyces pombe 44 2e-07 55.5
Created Date 25-Jun-2016