Tag |
Content |
WERAM ID |
WERAM-Arl-0094 |
Ensembl Protein ID |
fgenesh2_kg.6__2431__AT5G24330.1 |
Gene Name |
ATXR6 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HMT |
SET1 |
6.20e-34 |
117.3 |
215 |
337 |
Me_Reader |
PHD |
6.10e-11 |
43 |
33 |
81 |
|
Organism |
Arabidopsis lyrata |
Domain Profile |
HMT SET1
SET1.txt 2 elevakskikglglvakkeiekeelviEYvGevirsevadkrekeyekkeigvylfrldedaevvvdatkkgniarf 78 +l+v++++++g++++a++ i+++++++EYvG+v ++ ++re++y+ ++++++l+++d+++++v+++++++niarf fgenesh2_kg.6__2431__AT5G24330.1 215 PLMVVFDPYEGFTVEADRFIKDWTIITEYVGDV---DYLSNREDDYDGDSMMTLLHASDPSQCLVICPDRRSNIARF 288 799******************************...***************************************** PP SET1.txt 79 i....nhsce....pNceakvvavdgekkiviyakraIekgeeltydYk 119 i nhs+e +N+++ +++++ge++++++a+r+I+kge+l+ydY+ fgenesh2_kg.6__2431__AT5G24330.1 289 IsginNHSPEgrkkQNLKCVRFNINGEARVLLVANRDISKGERLYYDYN 337 *********99999**********************************7 PP
Me_Reader PHD
PHD.txt 2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 t+C C+ ++ + +++ Cd+Cd+ fHl C+ + l s+p+g sw+CpsC + fgenesh2_kg.6__2431__AT5G24330.1 33 TVCEECSSGKQPA-KLLLCDKCDKGFHLFCLRPILVSVPKG-SWFCPSCSK 81 7899995555554.4**************************.*******86 PP
|
Protein Sequence (Fasta) | MVAVRRRRTQ ASNPRSEPPQ QYMAEDSDSD WDTVCEECSS GKQPAKLLLC DKCDKGFHLF 60 CLRPILVSVP KGSWFCPSCS KHQIPKSFPL VQTKIIDFFR IKRSPDSSQI SNSSDSIGKK 120 RKKNSLVMSK KKRRLLPYNP SNDPQRRLEQ MASLATALRA SNTKFSNELT YVSGKAPGSA 180 NQAAFEKGGM QVLSKEGVET LALCKKMMDL GECPPLMVVF DPYEGFTVEA DRFIKDWTII 240 TEYVGDVDYL SNREDDYDGD SMMTLLHASD PSQCLVICPD RRSNIARFIS GINNHSPEGR 300 KKQNLKCVRF NINGEARVLL VANRDISKGE RLYYDYNGYE HEYPTEHFV 349Protein Fasta Sequence
>fgenesh2_kg.6__2431__AT5G24330.1|PHD|Arabidopsis lyrata MVAVRRRRTQASNPRSEPPQQYMAEDSDSDWDTVCEECSSGKQPAKLLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSKHQIPKSFPLVQTKIIDFFRIKRSPDSSQISNSSDSIGKKRKKNSLVMSKKKRRLLPYNPSNDPQRRLEQMASLATALRASNTKFSNELTYVSGKAPGSANQAAFEKGGMQVLSKEGVETLALCKKMMDLGECPPLMVVFDPYEGFTVEADRFIKDWTIITEYVGDVDYLSNREDDYDGDSMMTLLHASDPSQCLVICPDRRSNIARFISGINNHSPEGRKKQNLKCVRFNINGEARVLLVANRDISKGERLYYDYNGYEHEYPTEHFV
|
Nucleotide Sequence (Fasta) | ACCTCGGTCA AATCTCACAT TTATAATCTC TCACTCTCTC TTTCTCTGGT AAAATGGTAG 60 CTGTGCGACG AAGAAGAACC CAAGCGTCAA ACCCTAGATC CGAACCACCG CAGCAATACA 120 TGGCGGAAGA TTCCGATTCC GATTGGGATA CAGTCTGCGA AGAATGCAGC TCCGGGAAAC 180 AACCTGCAAA GCTGCTTCTT TGCGACAAAT GCGATAAAGG GTTTCATTTA TTTTGTCTCA 240 GACCAATCCT CGTTTCAGTT CCCAAAGGCT CTTGGTTCTG CCCTTCTTGT TCCAAACACC 300 AGATCCCTAA ATCTTTCCCT CTTGTTCAGA CTAAGATCAT AGATTTCTTC CGGATTAAGC 360 GGTCACCAGA CTCATCTCAA ATCTCAAATT CTTCAGATAG TATTGGGAAG AAACGGAAAA 420 AGAATAGCTT GGTGATGTCA AAGAAGAAGA GGAGGCTTCT TCCGTATAAT CCTAGCAATG 480 ATCCTCAAAG GAGACTTGAG CAAATGGCGT CTCTCGCCAC TGCGTTGAGA GCTTCCAACA 540 CTAAGTTTAG CAATGAGCTT ACTTATGTAT CTGGAAAGGC TCCAGGATCT GCAAATCAAG 600 CTGCTTTTGA GAAAGGAGGC ATGCAGGTTC TATCTAAAGA AGGCGTAGAG ACCTTAGCCT 660 TGTGCAAGAA AATGATGGAC CTCGGTGAAT GCCCGCCACT TATGGTCGTC TTCGATCCTT 720 ATGAAGGGTT CACAGTAGAG GCGGACAGGT TTATAAAAGA CTGGACCATA ATCACAGAGT 780 ACGTTGGGGA TGTTGATTAT TTGAGCAACA GAGAAGATGA CTATGATGGA GACAGCATGA 840 TGACTCTACT TCATGCCTCT GATCCTTCGC AATGTCTAGT AATTTGCCCT GACAGACGCA 900 GTAACATTGC GCGGTTTATC AGCGGCATCA ACAATCACTC TCCAGAAGGA AGGAAGAAGC 960 AGAACCTGAA ATGTGTGAGA TTCAACATCA ACGGAGAAGC TAGGGTTCTT CTCGTAGCTA 1020 ATAGAGACAT ATCTAAAGGG GAAAGATTGT ATTATGATTA CAACGGTTAT GAACATGAGT 1080 ATCCAACTGA ACATTTTGTA TAAGTTGCTT GTTCATCAAG AAAAAAC
1128Nucleotide Fasta Sequence
>fgenesh2_kg.6__2431__AT5G24330.1|PHD|Arabidopsis lyrata ACCTCGGTCAAATCTCACATTTATAATCTCTCACTCTCTCTTTCTCTGGTAAAATGGTAGCTGTGCGACGAAGAAGAACCCAAGCGTCAAACCCTAGATCCGAACCACCGCAGCAATACATGGCGGAAGATTCCGATTCCGATTGGGATACAGTCTGCGAAGAATGCAGCTCCGGGAAACAACCTGCAAAGCTGCTTCTTTGCGACAAATGCGATAAAGGGTTTCATTTATTTTGTCTCAGACCAATCCTCGTTTCAGTTCCCAAAGGCTCTTGGTTCTGCCCTTCTTGTTCCAAACACCAGATCCCTAAATCTTTCCCTCTTGTTCAGACTAAGATCATAGATTTCTTCCGGATTAAGCGGTCACCAGACTCATCTCAAATCTCAAATTCTTCAGATAGTATTGGGAAGAAACGGAAAAAGAATAGCTTGGTGATGTCAAAGAAGAAGAGGAGGCTTCTTCCGTATAATCCTAGCAATGATCCTCAAAGGAGACTTGAGCAAATGGCGTCTCTCGCCACTGCGTTGAGAGCTTCCAACACTAAGTTTAGCAATGAGCTTACTTATGTATCTGGAAAGGCTCCAGGATCTGCAAATCAAGCTGCTTTTGAGAAAGGAGGCATGCAGGTTCTATCTAAAGAAGGCGTAGAGACCTTAGCCTTGTGCAAGAAAATGATGGACCTCGGTGAATGCCCGCCACTTATGGTCGTCTTCGATCCTTATGAAGGGTTCACAGTAGAGGCGGACAGGTTTATAAAAGACTGGACCATAATCACAGAGTACGTTGGGGATGTTGATTATTTGAGCAACAGAGAAGATGACTATGATGGAGACAGCATGATGACTCTACTTCATGCCTCTGATCCTTCGCAATGTCTAGTAATTTGCCCTGACAGACGCAGTAACATTGCGCGGTTTATCAGCGGCATCAACAATCACTCTCCAGAAGGAAGGAAGAAGCAGAACCTGAAATGTGTGAGATTCAACATCAACGGAGAAGCTAGGGTTCTTCTCGTAGCTAATAGAGACATATCTAAAGGGGAAAGATTGTATTATGATTACAACGGTTATGAACATGAGTATCCAACTGAACATTTTGTATAAGTTGCTTGTTCATCAAGAAAAAAC
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |