WERAM Information

Tag Content
WERAM ID WERAM-Arl-0027
Ensembl Protein ID fgenesh1_pg.C_scaffold_6000741
Gene Name SRT2
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh1_pg.C_scaffold_6000741 fgenesh1_pg.C_scaffold_6000741 fgenesh1_pg.C_scaffold_6000741
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC SIR2 9.50e-74 248.7 65 349
Organism Arabidopsis lyrata
Domain Profile
  HDAC SIR2
                        SIR2.txt   2 klakllkkskkivvltGAGiStsaGIPDFRsseGlysklkkeelpspeaifdldffrkdpkv..fyalakelyp.lgsa 77 
                                     kl++l+++s+++++ltGAGiSt++GIPD+Rs++G ys+        +++i++++f+r+++++  ++a++++ ++ +++a
  fgenesh1_pg.C_scaffold_6000741  65 KLYRLFEQSSRLTILTGAGISTECGIPDYRSPNGAYSS-------GFKPITHQEFTRSSRARrrYWARSYAGWRrFTAA 136
                                     7899*********************************9.......5899********9999889*************** PP
                        SIR2.txt  78 kPtktHyflaelekkgkllrlytQNiDgLerkaglkedklvelHGslatasCtkCkkefpreeikeklkak........ 148
                                     +P ++H++la+lek+g++++++tQN+D+L+++ag++    +elHG+++t++C++C+ +f+r+ ++++lka         
  fgenesh1_pg.C_scaffold_6000741 137 QPGPAHTALASLEKAGRINFMITQNVDRLHHRAGSD---PLELHGTVYTVMCLDCGFSFSRDLFQDQLKAInpkaswae 212
                                     ***********************************6...9*****************************999******* PP
                        SIR2.txt 149 ....................................ekvpkCekCkgvlkpdivffgenlpeefleeveedlkeadlll 191
                                                                         +++p+CekCkgvlkpd++ffg+n+p+e++++++e +k++d++l
  fgenesh1_pg.C_scaffold_6000741 213 aiesidhgdpgseksfgmkqrpdgdieidekfweegFHIPVCEKCKGVLKPDVIFFGDNIPKERATQAMEVAKQSDAFL 291
                                     ******************************************************************************* PP
                        SIR2.txt 192 vlGtSlkvepvaslvkkavkkkvpvllvnleevkadkladlkllgdcdevveellkll 249
                                     vlG+Sl+ +++++lv++a+++++++++vn++e++ad+++ lk++++++e+++++l+  
  fgenesh1_pg.C_scaffold_6000741 292 VLGSSLMTMSAFRLVRAAHEAGAMTAIVNIGETRADDIVPLKINARVGEILHRVLDVG 349
                                     *****************************************************98865 PP
Protein Sequence
(Fasta)		MYRPLQSGGN LVMLFKGCRR FVRTTCRVSI PGGSLGNESK APPRFLRDKK IVPDADPPNM 60
EDINKLYRLF EQSSRLTILT GAGISTECGI PDYRSPNGAY SSGFKPITHQ EFTRSSRARR 120
RYWARSYAGW RRFTAAQPGP AHTALASLEK AGRINFMITQ NVDRLHHRAG SDPLELHGTV 180
YTVMCLDCGF SFSRDLFQDQ LKAINPKASW AEAIESIDHG DPGSEKSFGM KQRPDGDIEI 240
DEKFWEEGFH IPVCEKCKGV LKPDVIFFGD NIPKERATQA MEVAKQSDAF LVLGSSLMTM 300
SAFRLVRAAH EAGAMTAIVN IGETRADDIV PLKINARVGE ILHRVLDVGS LSVPAH 356
Nucleotide Sequence
(Fasta)		ATGTATCGGC CGCTGCAATC TGGGGGAAAT TTAGTTATGT TGTTTAAAGG ATGCAGACGT 60
TTTGTGAGAA CAACGTGTCG CGTTTCAATC CCTGGTGGTT CTTTGGGAAA TGAATCAAAA 120
GCACCTCCAA GGTTTCTGAG GGATAAAAAG ATAGTTCCAG ATGCTGATCC TCCCAATATG 180
GAAGATATTA ATAAGTTGTA TCGACTTTTT GAGCAAAGTT CGAGACTCAC CATCTTGACC 240
GGAGCTGGGA TTAGCACAGA ATGTGGAATT CCTGATTATA GAAGTCCCAA TGGAGCATAC 300
AGTTCTGGTT TCAAACCAAT TACCCATCAG GAATTCACTC GATCGAGCCG AGCTCGTAGG 360
CGGTATTGGG CAAGGAGTTA CGCTGGATGG AGACGGTTCA CTGCAGCACA ACCTGGACCA 420
GCGCATACTG CTTTAGCATC ACTAGAAAAA GCTGGACGAA TAAATTTTAT GATCACGCAA 480
AACGTTGACA GGTTGCATCA TCGTGCTGGG AGCGATCCAC TTGAATTACA TGGCACAGTA 540
TATACTGTTA TGTGCTTAGA TTGCGGCTTC TCTTTTTCCC GAGACTTGTT TCAGGATCAG 600
CTAAAAGCTA TCAATCCTAA GGCCAGTTGG GCTGAAGCTA TAGAAAGTAT CGATCATGGA 660
GATCCAGGAT CAGAGAAGAG CTTTGGCATG AAACAAAGGC CTGATGGTGA TATTGAGATT 720
GACGAAAAGT TTTGGGAAGA AGGTTTTCAT ATACCAGTAT GTGAGAAGTG CAAAGGAGTC 780
CTAAAGCCTG ATGTAATTTT CTTTGGGGAC AACATTCCAA AGGAAAGAGC TACTCAAGCA 840
ATGGAAGTTG CAAAACAGAG CGATGCATTC CTCGTGTTGG GTTCATCCTT AATGACAATG 900
TCTGCTTTTC GCCTTGTCAG AGCGGCTCAT GAGGCTGGTG CCATGACTGC AATTGTAAAT 960
ATAGGCGAAA CAAGAGCTGA TGACATTGTT CCATTGAAAA TCAATGCTAG GGTTGGTGAG 1020
ATATTGCACA GAGTTCTTGA CGTGGGATCG CTCAGTGTCC CAGCTCACTA G 1072
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Art-0118 AT5G09230.7 Arabidopsis thaliana 98 0.0 674
WERAM-Brr-0142 Bra028643.1-P Brassica rapa 91 8e-178 620
WERAM-Bro-0024 Bo2g009270.1 Brassica oleracea 91 2e-177 619
WERAM-Thc-0008 EOX92647 Theobroma cacao 75 4e-151 531
WERAM-Prp-0069 EMJ12669 Prunus persica 76 1e-143 506
WERAM-Glm-0041 GLYMA04G38730.1 Glycine max 75 1e-139 493
WERAM-Viv-0046 VIT_07s0031g02510.t01 Vitis vinifera 74 6e-139 491
WERAM-Met-0074 AES72910 Medicago truncatula 73 3e-138 488
WERAM-Pot-0061 POPTR_0005s06930.1 Populus trichocarpa 74 3e-138 488
WERAM-Sot-0097 PGSC0003DMT400082473 Solanum tuberosum 71 2e-128 455
WERAM-Sol-0062 Solyc04g009430.2.1 Solanum lycopersicum 71 8e-128 454
WERAM-Amt-0023 ERN08785 Amborella trichopoda 70 1e-123 439
WERAM-Sei-0033 Si009965m Setaria italica 70 8e-120 427
WERAM-Mua-0095 GSMUA_Achr6P25880_001 Musa acuminata 66 4e-119 425
WERAM-Orl-0007 KN538685.1_FGP039 Oryza longistaminata 70 4e-118 421
WERAM-Orm-0102 OMERI12G03010.1 Oryza meridionalis 70 2e-117 419
WERAM-Sob-0114 Sb08g004900.1 Sorghum bicolor 68 2e-117 419
WERAM-Ors-0107 OS12T0179800-01 Oryza sativa 69 3e-117 419
WERAM-Orp-0109 OPUNC12G04720.1 Oryza punctata 69 4e-117 418
WERAM-Orr-0119 ORUFI12G05460.1 Oryza rufipogon 70 6e-117 417
WERAM-Ori-0126 BGIOSGA036526-PA Oryza indica 69 7e-117 417
WERAM-Lep-0113 LPERR12G04350.1 Leersia perrieri 62 1e-116 416
WERAM-Brd-0118 BRADI4G41127.1 Brachypodium distachyon 68 2e-116 416
WERAM-Orbr-0122 OB12G14620.1 Oryza brachyantha 69 1e-115 413
WERAM-Tra-0230 Traes_5DL_84C49FB59.2 Triticum aestivum 68 2e-115 412
WERAM-Aet-0050 EMT19694 Aegilops tauschii 63 1e-113 407
WERAM-Zem-0150 GRMZM5G807054_P01 Zea mays 65 9e-112 400
WERAM-Orni-0118 ONIVA12G04440.1 Oryza nivara 71 3e-104 375
WERAM-Orgl-0114 OGLUM12G05580.1 Oryza glumaepatula 71 3e-104 375
WERAM-Php-0025 PP1S15_90V6.1 Physcomitrella patens 61 2e-100 363
WERAM-Sem-0074 EFJ28669 Selaginella moellendorffii 54 1e-83 307
WERAM-Chr-0008 EDP00705 Chlamydomonas reinhardtii 51 6e-60 228
WERAM-Orc-0113 ENSOCUP00000009744.3 Oryctolagus cuniculus 43 9e-56 214
WERAM-Caj-0096 ENSCJAP00000015889.2 Callithrix jacchus 45 1e-55 214
WERAM-Otg-0098 ENSOGAP00000008496.1 Otolemur garnettii 44 1e-55 214
WERAM-Ict-0083 ENSSTOP00000008774.2 Ictidomys tridecemlineatus 42 2e-55 213
WERAM-Ran-0010 ENSRNOP00000001523.4 Rattus norvegicus 42 3e-55 213
WERAM-Paa-0081 ENSPANP00000005490.1 Papio anubis 43 5e-55 212
WERAM-Chs-0026 ENSCSAP00000015768.1 Chlorocebus sabaeus 43 6e-55 211
WERAM-Mum-0098 ENSMUSP00000107697.1 Mus musculus 42 1e-54 211
WERAM-Lac-0179 ENSLACP00000020887.1 Latimeria chalumnae 44 1e-54 210
WERAM-Poa-0046 ENSPPYP00000005727.2 Pongo abelii 44 2e-54 210
WERAM-Bot-0183 ENSBTAP00000028210.3 Bos taurus 43 2e-54 210
WERAM-Gog-0207 ENSGGOP00000025620.1 Gorilla gorilla 44 2e-54 209
WERAM-Tas-0026 ENSTSYP00000002962.1 Tarsius syrichta 42 2e-54 209
WERAM-Caf-0113 ENSCAFP00000015057.3 Canis familiaris 44 2e-54 209
WERAM-Ova-0127 ENSOARP00000012850.1 Ovis aries 43 3e-54 209
WERAM-Pat-0044 ENSPTRP00000009383.4 Pan troglodytes 44 4e-54 209
WERAM-Hos-0046 ENSP00000202967.4 Homo sapiens 44 5e-54 208
WERAM-Ocp-0148 ENSOPRP00000015399.1 Ochotona princeps 44 1e-53 207
WERAM-Pes-0110 ENSPSIP00000013404.1 Pelodiscus sinensis 43 1e-53 207
WERAM-Mup-0031 ENSMPUP00000003126.1 Mustela putorius furo 44 1e-53 207
WERAM-Aim-0062 ENSAMEP00000005483.1 Ailuropoda melanoleuca 44 3e-53 206
WERAM-Fec-0171 ENSFCAP00000020847.1 Felis catus 44 3e-53 206
WERAM-Chh-0046 ENSCHOP00000005172.1 Choloepus hoffmanni 43 4e-53 206
WERAM-Cap-0138 ENSCPOP00000011117.2 Cavia porcellus 41 4e-53 205
WERAM-Meg-0094 ENSMGAP00000009092.2 Meleagris gallopavo 43 9e-53 204
WERAM-Sus-0071 ENSSSCP00000010568.2 Sus scrofa 42 1e-52 204
WERAM-Fia-0095 ENSFALP00000007922.1 Ficedula albicollis 42 2e-52 204
WERAM-Xet-0032 ENSXETP00000009271.1 Xenopus tropicalis 41 3e-52 202
WERAM-Gaga-0078 ENSGALP00000011706.4 Gallus gallus 42 8e-52 201
WERAM-Tag-0120 ENSTGUP00000009802.1 Taeniopygia guttata 41 9e-52 201
WERAM-Eqc-0095 ENSECAP00000011260.1 Equus caballus 42 1e-51 201
WERAM-Loa-0028 ENSLAFP00000001879.2 Loxodonta africana 41 1e-51 200
WERAM-Cii-0061 ENSCINP00000027422.2 Ciona intestinalis 39 4e-51 199
WERAM-Anp-0117 ENSAPLP00000013436.1 Anas platyrhynchos 43 4e-51 199
WERAM-Sah-0071 ENSSHAP00000008646.1 Sarcophilus harrisii 42 5e-51 199
WERAM-Asm-0019 ENSAMXP00000002317.1 Astyanax mexicanus 40 5e-50 195
WERAM-Nol-0169 ENSNLEP00000018942.2 Nomascus leucogenys 45 9e-50 194
WERAM-Drm-0032 FBpp0070817 Drosophila melanogaster 42 3e-49 193
WERAM-Ora-0041 ENSOANP00000006568.2 Ornithorhynchus anatinus 41 5e-49 192
WERAM-Gam-0012 ENSGMOP00000001231.1 Gadus morhua 41 2e-48 190
WERAM-Soa-0051 ENSSARP00000004940.1 Sorex araneus 39 2e-48 189
WERAM-Dar-0026 ENSDARP00000027611.6 Danio rerio 40 4e-48 189
WERAM-Pof-0223 ENSPFOP00000018246.2 Poecilia formosa 40 9e-48 187
WERAM-Anc-0024 ENSACAP00000002561.3 Anolis carolinensis 43 2e-47 186
WERAM-Pem-0012 ENSPMAP00000001780.1 Petromyzon marinus 41 2e-47 186
WERAM-Ptv-0014 ENSPVAP00000002101.1 Pteropus vampyrus 40 3e-47 186
WERAM-Xim-0194 ENSXMAP00000015621.1 Xiphophorus maculatus 39 6e-47 185
WERAM-Ect-0086 ENSETEP00000009903.1 Echinops telfairi 41 7e-47 185
WERAM-Gaa-0017 ENSGACP00000001945.1 Gasterosteus aculeatus 40 2e-46 183
WERAM-Tar-0187 ENSTRUP00000038866.1 Takifugu rubripes 40 6e-46 182
WERAM-Orn-0178 ENSONIP00000018093.1 Oreochromis niloticus 39 3e-45 179
WERAM-Orla-0208 ENSORLP00000024753.1 Oryzias latipes 39 3e-45 179
WERAM-Tub-0044 ENSTBEP00000005291.1 Tupaia belangeri 39 1e-43 174
WERAM-Tut-0072 ENSTTRP00000005343.1 Tursiops truncatus 42 2e-42 170
WERAM-Dan-0155 ENSDNOP00000033669.1 Dasypus novemcinctus 43 2e-42 170
WERAM-Cae-0023 F46G10.7a Caenorhabditis elegans 39 3e-42 169
WERAM-Mam-0185 ENSMMUP00000026241.2 Macaca mulatta 28 2e-23 107
WERAM-Myl-0098 ENSMLUP00000007946.2 Myotis lucifugus 28 2e-23 107
WERAM-Mod-0008 ENSMODP00000000983.1 Monodelphis domestica 27 3e-22 103
WERAM-Ten-0147 ENSTNIP00000015282.1 Tetraodon nigroviridis 30 9e-22 101
WERAM-Org-0043 ORGLA04G0042700.1 Oryza glaberrima 28 4e-21 99.8
WERAM-Mae-0123 ENSMEUP00000012391.1 Macropus eugenii 25 6e-18 89.0
WERAM-Asfu-0001 CADAFUAP00000229 Aspergillus fumigatus 28 2e-17 87.4
WERAM-Fuo-0021 FOXG_06023P0 Fusarium oxysporum 28 1e-16 84.7
WERAM-Ere-0059 ENSEEUP00000005136.1 Erinaceus europaeus 25 1e-16 84.7
WERAM-Scj-0035 EEB09012 Schizosaccharomyces japonicus 27 4e-16 83.2
WERAM-Cis-0072 ENSCSAVP00000015450.1 Ciona savignyi 24 4e-16 82.8
WERAM-Asg-0028 AAS54472 Ashbya gossypii 27 7e-16 82.0
WERAM-Asni-0001 CADANGAP00000714 Aspergillus niger 28 1e-15 81.3
WERAM-Mao-0040 MGG_17827T0 Magnaporthe oryzae 29 2e-15 80.9
WERAM-Asn-0020 CADANIAP00005090 Aspergillus nidulans 26 3e-15 80.1
WERAM-Cag-0026 CAG62123 Candida glabrata 27 9e-15 78.6
WERAM-Miv-0014 MVLG_02300T0 Microbotryum violaceum 27 9e-15 78.6
WERAM-Ast-0032 CADATEAP00008928 Aspergillus terreus 25 1e-14 78.2
WERAM-Aso-0010 CADAORAP00001539 Aspergillus oryzae 26 1e-14 78.2
WERAM-Asf-0008 CADAFLAP00002195 Aspergillus flavus 26 1e-14 78.2
WERAM-Dio-0050 ENSDORP00000004937.1 Dipodomys ordii 25 1e-14 77.8
WERAM-Gag-0013 GGTG_03219T0 Gaeumannomyces graminis 27 1e-14 77.8
WERAM-Trv-0012 EHK19002 Trichoderma virens 26 2e-14 77.4
WERAM-Trr-0018 EGR46788 Trichoderma reesei 26 2e-14 77.4
WERAM-Nec-0006 EFNCRP00000000764 Neurospora crassa 26 8e-14 75.5
WERAM-Kll-0027 CAG98291 Kluyveromyces lactis 27 8e-14 75.5
WERAM-Chg-0039 EAQ84978 Chaetomium globosum 27 9e-14 75.1
Created Date 25-Jun-2016