WERAM Information

Tag Content
WERAM ID WERAM-Arl-0022
Ensembl Protein ID fgenesh1_pg.C_scaffold_4000403
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh1_pg.C_scaffold_4000403 fgenesh1_pg.C_scaffold_4000403 fgenesh1_pg.C_scaffold_4000403
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT SUV39 3.30e-43 147.9 221 510
Organism Arabidopsis lyrata
Domain Profile
  HMT SUV39
                       SUV39.txt   2 rLqvfktenk..GwGv.rclddiakgsFvciyaGeiltddeaekeg 44 
                                     r++++++ ++  G+++ ++++ +++   +    G il d +   e 
  fgenesh1_pg.C_scaffold_4000403 221 RFKLVRKPDQpsGYAIwKSVEILRNHDLIDPRNGSILGDLSFGAEV 266
                                     6677777766668888888888899999999999998887766653 PP
                       SUV39.txt   2 rLqvfktenkGwGvrclddiakgsFvciyaGeiltddeaekegleegdeyladldskesv..enlkegyesdvplssds 78 
                                     +L+vfkt+n GwG+r++d i++g+F+c++aG   t++e+e     e+d+yl+d+++++++  +n++++  ++       
  fgenesh1_pg.C_scaffold_4000403 370 HLEVFKTANCGWGLRSWDPIRAGTFICEFAGVSKTKEEVE-----EDDDYLFDTSRIYHTfiWNYEPQLLRED-----A 438
                                     79******************************99999887.....56**********9987788877777665.....5 PP
                       SUV39.txt  79 sntrqekdkeeseyiidakkegnvgrflnHscspNlfvqnvfvdthdlrfprvafFaskrikagtELtwdYg 150
                                     s++ +e  +  ++++i+ak++gnvgrf+nHsc pN+f+q++ ++ +  ++ r+++Fa+k+i+++tELt+dYg
  fgenesh1_pg.C_scaffold_4000403 439 SKQVSEVINLPTQVLISAKEKGNVGRFMNHSCWPNVFWQPIEYEDNGVTYVRIGLFAMKHIPPMTELTYDYG 510
                                     6888999999*************************************************************6 PP
Protein Sequence
(Fasta)		MVSPPPTLMV FDDFNNNSYD GGAGPSTGPR KRGRGRPKGS KNGTRKPKKP KAYDPNSKLI 60
KSCPKFDSGI TKAERESGNL EIVASVLMRF DAIRRRLHQV NQPKDILTTA STNCMRLGVR 120
TNMTRRIGPI PGVQVGDIFY YWGEMCLVGL HRDMAAGIDY LSAKRSGVDG HAATSVVTSG 180
QYDDETEELD TLIYIGQDGK GKNRQPCDQH VIGKSGFKEF RFKLVRKPDQ PSGYAIWKSV 240
EILRNHDLID PRNGSILGDL SFGAEVLRVP LVNEVDEDDK TIPEDFDYIR SQCYSGMMFD 300
LNVDIQSLGC QNCESCSHQN CSCMGKNGGE LPYHNNILVS RKPLIYECGG SCPCPIDCPN 360
RLVQTGLKLH LEVFKTANCG WGLRSWDPIR AGTFICEFAG VSKTKEEVEE DDDYLFDTSR 420
IYHTFIWNYE PQLLREDASK QVSEVINLPT QVLISAKEKG NVGRFMNHSC WPNVFWQPIE 480
YEDNGVTYVR IGLFAMKHIP PMTELTYDYG VSCVEKNGED EILYKGKKIC LCGSVKCRGS 540
FG 542
Nucleotide Sequence
(Fasta)		ATGGTCTCAC CACCTCCAAC CCTAATGGTA TTTGATGACT TCAACAACAA CTCTTATGAT 60
GGGGGTGCTG GTCCTAGTAC TGGTCCAAGA AAACGAGGAC GTGGCCGACC AAAGGGTTCA 120
AAAAACGGGA CGAGAAAGCC AAAGAAGCCA AAAGCATATG ATCCTAATAG CAAACTGATT 180
AAATCTTGTC CAAAATTTGA TTCAGGGATA ACCAAAGCAG AGAGAGAAAG CGGAAACCTT 240
GAGATTGTTG CTTCGGTGTT GATGCGGTTT GACGCGATTA GACGGCGATT ACACCAAGTA 300
AACCAGCCAA AAGACATCCT TACAACAGCG TCAACTAATT GCATGAGATT GGGAGTCCGG 360
ACAAATATGA CGAGAAGAAT TGGTCCAATT CCTGGAGTAC AAGTAGGCGA TATATTCTAC 420
TACTGGGGTG AAATGTGCTT AGTCGGTCTT CACAGAGACA TGGCCGCGGG CATTGATTAT 480
CTGTCAGCTA AAAGGAGTGG AGTGGATGGT CATGCTGCTA CGAGTGTGGT AACATCAGGA 540
CAGTACGATG ATGAAACCGA GGAGCTTGAC ACTTTGATCT ATATCGGACA AGACGGAAAG 600
GGCAAGAACC GTCAACCATG TGATCAGCAT GTGATAGGAA AATCTGGCTT TAAGGAGTTC 660
AGATTCAAAT TGGTGAGGAA ACCAGACCAA CCATCTGGTT ATGCAATCTG GAAATCAGTT 720
GAAATTTTGA GGAACCATGA CTTGATTGAT CCAAGAAATG GTTCTATACT TGGAGATCTT 780
TCTTTTGGAG CAGAGGTTTT ACGAGTTCCG CTCGTTAATG AAGTTGATGA AGATGACAAA 840
ACGATTCCTG AAGATTTTGA CTACATTAGA TCTCAGTGTT ACTCAGGTAT GATGTTTGAT 900
CTTAATGTTG ATATTCAATC ACTTGGATGC CAGAATTGTG AGTCATGCAG TCATCAAAAC 960
TGCTCGTGCA TGGGTAAAAA CGGTGGCGAG CTACCATACC ATAACAACAT TTTGGTTTCT 1020
CGTAAACCAT TGATTTACGA GTGTGGTGGA TCTTGTCCCT GCCCCATCGA TTGCCCAAAC 1080
CGATTGGTTC AAACCGGTTT GAAGCTCCAC TTGGAAGTGT TCAAAACAGC AAACTGTGGT 1140
TGGGGTTTAC GTTCTTGGGA TCCAATCCGA GCGGGAACTT TTATCTGCGA GTTTGCCGGT 1200
GTGAGCAAGA CAAAAGAAGA AGTAGAAGAG GATGACGATT ACTTGTTCGA CACATCTCGG 1260
ATTTATCATA CCTTCATATG GAACTATGAA CCTCAGCTTT TGCGTGAAGA TGCTTCAAAA 1320
CAGGTCTCTG AAGTTATCAA TCTTCCGACA CAAGTCTTGA TAAGTGCCAA GGAGAAAGGA 1380
AATGTAGGTC GGTTCATGAA CCACAGCTGT TGGCCCAATG TTTTTTGGCA GCCTATTGAA 1440
TATGAAGACA ACGGTGTTAC ATATGTTCGC ATTGGACTTT TTGCAATGAA GCATATTCCT 1500
CCAATGACAG AGTTAACATA TGACTATGGA GTTTCTTGTG TGGAGAAGAA TGGAGAAGAT 1560
GAGATACTTT ATAAAGGCAA GAAGATTTGT CTATGTGGTT CAGTCAAATG TCGTGGCTCT 1620
TTTGGCTGA
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Art-0044 AT2G24740.1 Arabidopsis thaliana 69 0.0 803
WERAM-Bro-0115 Bo6g105260.1 Brassica oleracea 54 4e-168 588
WERAM-Brr-0018 Bra004258.1-P Brassica rapa 54 4e-167 585
WERAM-Pot-0040 POPTR_0003s18740.1 Populus trichocarpa 45 2e-121 433
WERAM-Thc-0121 EOY19472 Theobroma cacao 44 4e-117 419
WERAM-Glm-0201 GLYMA15G35450.1 Glycine max 43 6e-117 418
WERAM-Prp-0040 EMJ05444 Prunus persica 45 7e-117 418
WERAM-Met-0060 KEH32911 Medicago truncatula 43 2e-115 413
WERAM-Viv-0081 VIT_13s0047g00120.t01 Vitis vinifera 45 3e-113 406
WERAM-Orl-0082 KN539783.1_FGP008 Oryza longistaminata 42 1e-104 377
WERAM-Org-0110 ORGLA11G0160500.1 Oryza glaberrima 42 1e-104 377
WERAM-Orb-0118 OBART11G19080.1 Oryza barthii 42 1e-104 377
WERAM-Brd-0028 BRADI1G53840.1 Brachypodium distachyon 43 1e-104 377
WERAM-Ors-0105 OS11T0602200-01 Oryza sativa 42 1e-104 377
WERAM-Orr-0118 ORUFI11G20440.1 Oryza rufipogon 42 1e-104 377
WERAM-Sei-0106 Si028938m Setaria italica 42 2e-104 377
WERAM-Orp-0070 OPUNC07G07250.1 Oryza punctata 42 5e-104 375
WERAM-Tra-0156 Traes_4DL_7DA2A133B.1 Triticum aestivum 42 6e-104 375
WERAM-Orni-0117 ONIVA11G18710.1 Oryza nivara 42 2e-103 373
WERAM-Zem-0004 AC233961.1_FGP001 Zea mays 41 2e-103 373
WERAM-Sob-0019 Sb02g006620.1 Sorghum bicolor 42 3e-103 373
WERAM-Hov-0083 MLOC_63544.1 Hordeum vulgare 42 9e-103 371
WERAM-Orbr-0036 OB0348G10010.1 Oryza brachyantha 42 1e-102 370
WERAM-Orgl-0113 OGLUM11G18450.2 Oryza glumaepatula 42 6e-102 369
WERAM-Aet-0087 EMT20679 Aegilops tauschii 42 5e-100 362
WERAM-Ori-0115 BGIOSGA033726-PA Oryza indica 42 9e-97 351
WERAM-Tru-0079 TRIUR3_29078-P1 Triticum urartu 37 1e-92 338
WERAM-Sot-0091 PGSC0003DMT400077329 Solanum tuberosum 40 1e-91 335
WERAM-Sol-0115 Solyc09g082050.2.1 Solanum lycopersicum 40 1e-90 331
WERAM-Lep-0057 LPERR05G16930.1 Leersia perrieri 39 7e-90 328
WERAM-Orm-0054 OMERI05G19070.1 Oryza meridionalis 39 2e-88 323
WERAM-Amt-0085 ERM98215 Amborella trichopoda 40 1e-79 295
WERAM-Sem-0004 EFJ22703 Selaginella moellendorffii 32 2e-60 230
WERAM-Php-0129 PP1S9_150V6.1 Physcomitrella patens 33 4e-56 216
WERAM-Mua-0084 GSMUA_Achr5P13120_001 Musa acuminata 34 5e-55 213
Created Date 25-Jun-2016