Tag |
Content |
WERAM ID |
WERAM-Viv-0046 |
Ensembl Protein ID |
VIT_07s0031g02510.t01 |
Gene Name |
VIT_07s0031g02510 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
SIR2 |
2.40e-70 |
237.4 |
133 |
412 |
|
Organism |
Vitis vinifera |
Domain Profile |
HDAC SIR2
SIR2.txt 3 lakllkkskkivvltGAGiStsaGIPDFRsseGlysklkkeelpspeaifdldffrkdpkv..fyalakelyp.lgsakPtktHyfla 87 l++++ +s+k+vvltGAGiSt++GIPD+Rs++G ys+ ++i++++f+r+++++ ++a++++ ++ + +a+P + H++la VIT_07s0031g02510.t01 133 LYQFFDSSSKVVVLTGAGISTECGIPDYRSPNGAYSSG-------YKPITHQEFVRSSKARrrYWARSYAGWKrFIAAQPGASHSALA 213 678999******************************93.......478********9998889************************* PP SIR2.txt 88 elekkgkllrlytQNiDgLerkaglkedklvelHGslatasCtkCkkefpreeikeklkak........................... 148 +lek+g++++++tQN+D+L+++ag++ +elHG+++ + C++C++ ++r+ ++++lka VIT_07s0031g02510.t01 214 SLEKAGRINYIITQNVDRLHHRAGSS---PLELHGTVYSVVCLDCGYLINRNLFQDELKALnpkwaaaienlkhdspgsdksfgmkqr 298 *************************7...9******************************9*************************** PP SIR2.txt 149 ...............ekvpkCekCkgvlkpdivffgenlpeefleeveedlkeadlllvlGtSlkvepvaslvkkavkkkvpvllvnl 221 + +p+C+kCkgvlkpd+vffg+n+p++++ ++++++ +d+llv+G+Sl+ +++++lv++a+++++ +++vn VIT_07s0031g02510.t01 299 pdgdieidekfweenFCIPTCQKCKGVLKPDVVFFGDNIPKDRAADAMAAVRGCDALLVVGSSLMTMSAFRLVRAAHEAGAATAIVNV 386 **************999*********************************************************************** PP SIR2.txt 222 eevkadkladlkllgdcdevveellk 247 ++++ad+ ++lk++++c+e++ +ll+ VIT_07s0031g02510.t01 387 GNTRADDFVSLKINARCGEILPRLLD 412 **********************9976 PP
|
Protein Sequence (Fasta) | MRKMRRRNRY HYSILRIEAR RHILYESEEG IDWNQNQRQM TVSSTSIFRS VRKVLGTAVT 60 DTIQSSSKNW QSLFRVRSVL PFQDSVKFVQ TSCRISVPGT SSGSEQKVPS NFLRDKKLVP 120 ESDPPNIEDI KFLYQFFDSS SKVVVLTGAG ISTECGIPDY RSPNGAYSSG YKPITHQEFV 180 RSSKARRRYW ARSYAGWKRF IAAQPGASHS ALASLEKAGR INYIITQNVD RLHHRAGSSP 240 LELHGTVYSV VCLDCGYLIN RNLFQDELKA LNPKWAAAIE NLKHDSPGSD KSFGMKQRPD 300 GDIEIDEKFW EENFCIPTCQ KCKGVLKPDV VFFGDNIPKD RAADAMAAVR GCDALLVVGS 360 SLMTMSAFRL VRAAHEAGAA TAIVNVGNTR ADDFVSLKIN ARCGEILPRL LDIGCLSIPV 420 I 421Protein Fasta Sequence
>VIT_07s0031g02510.t01|SIR2|Vitis vinifera MRKMRRRNRYHYSILRIEARRHILYESEEGIDWNQNQRQMTVSSTSIFRSVRKVLGTAVTDTIQSSSKNWQSLFRVRSVLPFQDSVKFVQTSCRISVPGTSSGSEQKVPSNFLRDKKLVPESDPPNIEDIKFLYQFFDSSSKVVVLTGAGISTECGIPDYRSPNGAYSSGYKPITHQEFVRSSKARRRYWARSYAGWKRFIAAQPGASHSALASLEKAGRINYIITQNVDRLHHRAGSSPLELHGTVYSVVCLDCGYLINRNLFQDELKALNPKWAAAIENLKHDSPGSDKSFGMKQRPDGDIEIDEKFWEENFCIPTCQKCKGVLKPDVVFFGDNIPKDRAADAMAAVRGCDALLVVGSSLMTMSAFRLVRAAHEAGAATAIVNVGNTRADDFVSLKINARCGEILPRLLDIGCLSIPVI
|
Nucleotide Sequence (Fasta) | ATGCGAAAAA TGAGAAGAAG AAACCGATAT CATTACTCAA TTCTGAGAAT CGAAGCTCGC 60 AGGCATATTT TGTACGAGAG TGAAGAGGGA ATTGATTGGA ATCAAAACCA GAGGCAAATG 120 ACGGTGTCCT CCACCTCTAT CTTCAGAAGT GTGAGGAAAG TGTTGGGGAC AGCAGTGACA 180 GATACTATAC AATCAAGTAG CAAAAATTGG CAATCACTGT TCAGAGTAAG AAGTGTCCTA 240 CCTTTCCAGG ATTCTGTGAA GTTTGTCCAA ACATCATGCC GAATCTCAGT TCCTGGGACC 300 TCATCAGGAA GTGAACAGAA AGTGCCCTCA AACTTTCTAA GGGACAAGAA GTTGGTTCCT 360 GAATCAGATC CTCCAAACAT TGAAGATATC AAATTTCTAT ATCAATTCTT TGATAGCAGT 420 AGCAAGGTTG TGGTATTGAC TGGAGCTGGA ATAAGTACAG AATGTGGCAT TCCTGATTAT 480 AGAAGCCCTA ATGGAGCTTA TAGTTCTGGT TACAAACCAA TTACCCATCA GGAGTTTGTA 540 CGTTCAAGTA AGGCCCGCAG GCGGTATTGG GCAAGGAGCT ATGCTGGATG GAAACGATTC 600 ATTGCAGCAC AACCTGGTGC ATCTCATAGT GCATTGGCAT CTTTAGAAAA AGCTGGTCGG 660 ATAAATTATA TAATTACGCA AAATGTTGAC AGGCTGCATC ATCGTGCTGG TAGCAGCCCA 720 CTTGAATTAC ATGGAACTGT TTATTCTGTA GTTTGTTTAG ATTGTGGTTA CTTGATCAAC 780 CGGAATTTAT TTCAAGATGA ATTGAAGGCC CTTAATCCAA AGTGGGCAGC AGCAATTGAA 840 AACCTGAAGC ATGACAGCCC TGGGTCAGAC AAGAGCTTTG GGATGAAGCA AAGGCCTGAT 900 GGTGATATCG AGATTGATGA AAAATTCTGG GAGGAGAATT TTTGCATTCC CACTTGCCAG 960 AAATGCAAGG GGGTATTGAA ACCTGATGTT GTCTTCTTTG GTGACAATAT CCCCAAGGAT 1020 AGAGCTGCTG ACGCAATGGC AGCTGTGAGA GGATGTGATG CTTTACTGGT AGTTGGATCA 1080 TCTCTGATGA CCATGTCTGC TTTCCGACTT GTCAGGGCTG CTCATGAAGC AGGGGCTGCT 1140 ACTGCAATTG TGAATGTAGG TAACACAAGG GCTGATGATT TCGTGTCCTT GAAAATCAAT 1200 GCACGATGTG GGGAGATACT GCCAAGATTG CTAGACATTG GATGCCTAAG CATACCTGTG 1260 ATCTAGTGTT GATATCATTA AAAGTTAAGT ATGGGAACAA GTTGGAAACA GTCGCACAAT 1320 GGAGTTGTCC ATGCAGAGAC CATTTGACTC AAAATGAAAG CAAATCAGTG TGTTCACAAA 1380 AGGAGTTGTG CCTTAATACC TCCTCTACCC TACTTGTATT TGTAGCCCAC TCACATTGTT 1440 TTATATCTAA CCAAAGCCAG GAACTGT
1468Nucleotide Fasta Sequence
>VIT_07s0031g02510.t01|SIR2|Vitis vinifera ATGCGAAAAATGAGAAGAAGAAACCGATATCATTACTCAATTCTGAGAATCGAAGCTCGCAGGCATATTTTGTACGAGAGTGAAGAGGGAATTGATTGGAATCAAAACCAGAGGCAAATGACGGTGTCCTCCACCTCTATCTTCAGAAGTGTGAGGAAAGTGTTGGGGACAGCAGTGACAGATACTATACAATCAAGTAGCAAAAATTGGCAATCACTGTTCAGAGTAAGAAGTGTCCTACCTTTCCAGGATTCTGTGAAGTTTGTCCAAACATCATGCCGAATCTCAGTTCCTGGGACCTCATCAGGAAGTGAACAGAAAGTGCCCTCAAACTTTCTAAGGGACAAGAAGTTGGTTCCTGAATCAGATCCTCCAAACATTGAAGATATCAAATTTCTATATCAATTCTTTGATAGCAGTAGCAAGGTTGTGGTATTGACTGGAGCTGGAATAAGTACAGAATGTGGCATTCCTGATTATAGAAGCCCTAATGGAGCTTATAGTTCTGGTTACAAACCAATTACCCATCAGGAGTTTGTACGTTCAAGTAAGGCCCGCAGGCGGTATTGGGCAAGGAGCTATGCTGGATGGAAACGATTCATTGCAGCACAACCTGGTGCATCTCATAGTGCATTGGCATCTTTAGAAAAAGCTGGTCGGATAAATTATATAATTACGCAAAATGTTGACAGGCTGCATCATCGTGCTGGTAGCAGCCCACTTGAATTACATGGAACTGTTTATTCTGTAGTTTGTTTAGATTGTGGTTACTTGATCAACCGGAATTTATTTCAAGATGAATTGAAGGCCCTTAATCCAAAGTGGGCAGCAGCAATTGAAAACCTGAAGCATGACAGCCCTGGGTCAGACAAGAGCTTTGGGATGAAGCAAAGGCCTGATGGTGATATCGAGATTGATGAAAAATTCTGGGAGGAGAATTTTTGCATTCCCACTTGCCAGAAATGCAAGGGGGTATTGAAACCTGATGTTGTCTTCTTTGGTGACAATATCCCCAAGGATAGAGCTGCTGACGCAATGGCAGCTGTGAGAGGATGTGATGCTTTACTGGTAGTTGGATCATCTCTGATGACCATGTCTGCTTTCCGACTTGTCAGGGCTGCTCATGAAGCAGGGGCTGCTACTGCAATTGTGAATGTAGGTAACACAAGGGCTGATGATTTCGTGTCCTTGAAAATCAATGCACGATGTGGGGAGATACTGCCAAGATTGCTAGACATTGGATGCCTAAGCATACCTGTGATCTAGTGTTGATATCATTAAAAGTTAAGTATGGGAACAAGTTGGAAACAGTCGCACAATGGAGTTGTCCATGCAGAGACCATTTGACTCAAAATGAAAGCAAATCAGTGTGTTCACAAAAGGAGTTGTGCCTTAATACCTCCTCTACCCTACTTGTATTTGTAGCCCACTCACATTGTTTTATATCTAACCAAAGCCAGGAACTGT
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Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |