WERAM Information

Tag Content
WERAM ID WERAM-Tra-0251
Ensembl Protein ID Traes_6AS_3BB0C3778.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Traes_6AS_3BB0C3778 Traes_6AS_3BB0C3778.1 Traes_6AS_3BB0C3778.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 1.40e-155 519.9 22 333
Organism Triticum aestivum
Domain Profile
  HDAC Class-I
            class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnv 88 
                            ++v+y+y++++g+y+ygq+hpmkp+r++++h+Lv++ygl++ le+ +p  as +++++fhs+ey++fl + + + +   ++ +k+fnv
  Traes_6DS_08E9A4EDB.1  22 RRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLVIHYGLHRLLELSRPFPASEADISRFHSDEYVSFLASATGNPTILDPRAVKRFNV 109
                            589*********************************************************************999999999******* PP
            class-1.txt  89 gedcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgve 176
                            gedcPvfdglf +cq+++G+s+ aa kLn+++adi++nwaGGlhhakk easGfcyvnDivlailellk h+rvly+did+hhGDgve
  Traes_6DS_08E9A4EDB.1 110 GEDCPVFDGLFPFCQASAGGSIGAAVKLNRGDADITVNWAGGLHHAKKGEASGFCYVNDIVLAILELLKFHRRVLYVDIDVHHGDGVE 197
                            **************************************************************************************** PP
            class-1.txt 177 eafyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrl 264
                            eaf tt+rvmtvsfhkyg+ ffPgtG+++dvga++gk+yavnvPl+dgidD++++ +f+ +i++v+e+++Pe+vvlqcGaDslagDrl
  Traes_6DS_08E9A4EDB.1 198 EAFFTTNRVMTVSFHKYGD-FFPGTGHITDVGAGEGKHYAVNVPLSDGIDDDTFRDLFQCIIKRVMEVYQPEVVVLQCGADSLAGDRL 284
                            *******************.******************************************************************** PP
            class-1.txt 265 gefnlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
                            g+fnls+kgha+c++f++sfn+p++vlGGGGYt+rnvaRcw+yetav++
  Traes_6DS_08E9A4EDB.1 285 GCFNLSVKGHADCLRFLRSFNIPMMVLGGGGYTIRNVARCWCYETAVAV 333
                            **********************************************986 PP
Protein Sequence
(Fasta)		MPKQFPLIQT KIVDFFKIQR RPAFAAAEPP EGKKRKRKAA SALVVSKKKS RKLLPFTPSE 60
DPGRRLTQMA SLATALTATG AVFSNDLTYV PGMAPRSANQ SALEAGGMQV LPREDAETLS 120
LCKRMMEQGE WPPLLVVFDP VEGFTVEADR HIKDLTIITE YVGDVDYLRN REHDDGDSMM 180
TLLSAALPSK SLVICPDKRS NIARFINGIN NHTPEGRKKQ NLKCVRFAID GECHCLLVAN 240
RDISKGERLY YDYNGDEHEY PTHHFV 266
Nucleotide Sequence
(Fasta)		GGCCTCCACA TCTTCTGCCT CCGCCCCATC CTCCCGCGCG TGCCCGCCGG CGACTGGTTC 60
TGCCCCTCCT GCGCCGCCCC CGCCGCCACC GCCCATTCGG CCAAATCCGC CGCCGCCGTC 120
CAGACCAAGA TGCCCAAACA GTTCCCGCTG ATCCAGACGA AGATCGTCGA TTTCTTCAAG 180
ATCCAGCGGC GCCCGGCGTT CGCGGCCGCC GAGCCGCCGG AGGGGAAGAA GAGGAAGCGG 240
AAGGCCGCCA GCGCGCTGGT GGTGTCCAAG AAGAAGAGCC GGAAGCTGCT GCCCTTCACC 300
CCCAGCGAGG ACCCCGGCCG CCGCCTCACG CAGATGGCCT CGCTCGCCAC CGCGCTCACG 360
GCCACCGGCG CCGTCTTCAG CAACGACCTC ACCTACGTGC CCGGCATGGC GCCCCGGTCC 420
GCCAACCAGT CCGCCCTCGA GGCAGGAGGG ATGCAGGTGC TGCCGAGGGA GGATGCAGAG 480
ACATTGAGCC TCTGCAAGAG GATGATGGAG CAAGGGGAAT GGCCCCCTCT CCTCGTCGTC 540
TTCGATCCAG TGGAAGGATT CACGGTGGAG GCAGACAGGC ACATCAAGGA CCTGACCATC 600
ATCACCGAGT ACGTCGGCGA TGTGGACTAC CTTCGAAACC GTGAGCATGA TGACGGGGAC 660
AGCATGATGA CCCTGCTCTC TGCCGCGCTG CCGTCCAAGA GCCTCGTCAT CTGCCCTGAC 720
AAGCGGAGCA ACATTGCGCG GTTCATCAAT GGGATAAACA ACCACACGCC TGAAGGCAGG 780
AAGAAGCAGA ACCTCAAGTG TGTGCGGTTC GCCATTGACG GCGAGTGCCA TTGTCTCCTG 840
GTGGCCAACA GGGACATCTC CAAGGGGGAG AGGCTGTACT ACGACTACAA CGGTGACGAG 900
CATGAGTACC CAACTCACCA TTTTGTATGA CACATGGGCT GATGTTTAGT CTGCAATCTG 960
CATATTCATT TTATCTGTAA TCATAGGAAA ACGATTATGA TGATCCCATT CCCCCAAAAC 1020
TCAACATGTA GAGTCATCTA AGTGGTTGAT AGATCTTGAA ATTTTTAAGC TGGAAAAGGG 1080
GAAAAGGGGA ATTGTAAACA TTGTGTATCC AATGGAATGG AATGCAATGG CAAATGGGTT 1140
TGTTCTGTTC ATGCCTGTGC CTGGTGTAAT TGCCCTTACT CAATGTTTTT GTTCGAAGGC 1200
ACAAATGCCA AAAGAAGATG AAAT 1225
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Aet-0004 EMT03211 Aegilops tauschii 97 3e-126 447
WERAM-Hov-0029 MLOC_20462.1 Hordeum vulgare 94 9e-122 433
WERAM-Orm-0019 OMERI02G01090.1 Oryza meridionalis 84 3e-109 391
WERAM-Orni-0016 ONIVA02G01670.1 Oryza nivara 84 6e-109 390
WERAM-Brd-0063 BRADI3G02220.1 Brachypodium distachyon 82 6e-109 390
WERAM-Orb-0017 OBART02G01770.1 Oryza barthii 83 9e-109 390
WERAM-Orgl-0018 OGLUM02G01630.1 Oryza glumaepatula 83 5e-108 387
WERAM-Org-0017 ORGLA02G0016300.1 Oryza glaberrima 83 5e-108 387
WERAM-Ori-0021 BGIOSGA007416-PA Oryza indica 82 5e-108 387
WERAM-Lep-0020 LPERR02G01570.1 Leersia perrieri 80 5e-108 387
WERAM-Orp-0018 OPUNC02G01240.1 Oryza punctata 83 1e-107 386
WERAM-Sei-0071 Si017644m Setaria italica 78 5e-105 377
WERAM-Sob-0063 Sb04g001900.1 Sorghum bicolor 80 8e-105 377
WERAM-Zem-0105 GRMZM2G305124_P01 Zea mays 80 6e-103 370
WERAM-Mua-0074 GSMUA_Achr4P19780_001 Musa acuminata 74 2e-101 365
WERAM-Glm-0242 GLYMA18G52260.1 Glycine max 72 1e-100 363
WERAM-Pot-0129 POPTR_0012s02530.1 Populus trichocarpa 72 2e-100 362
WERAM-Thc-0039 EOY23615 Theobroma cacao 70 4e-97 351
WERAM-Viv-0102 VIT_16s0098g01510.t01 Vitis vinifera 70 9e-97 350
WERAM-Met-0006 AES58731 Medicago truncatula 71 2e-96 349
WERAM-Sot-0056 PGSC0003DMT400047656 Solanum tuberosum 71 5e-94 341
WERAM-Brr-0051 Bra009752.1-P Brassica rapa 70 2e-93 339
WERAM-Bro-0133 Bo7g096970.1 Brassica oleracea 70 3e-93 338
WERAM-Art-0128 AT5G24330.1 Arabidopsis thaliana 69 3e-93 338
WERAM-Prp-0117 EMJ20963 Prunus persica 70 3e-92 335
WERAM-Arl-0094 fgenesh2_kg.6__ 2431__ AT5G24330.1 Arabidopsis lyrata 68 4e-92 334
WERAM-Sol-0045 Solyc03g082860.2.1 Solanum lycopersicum 70 2e-91 332
WERAM-Tru-0048 TRIUR3_21302-P1 Triticum urartu 61 2e-83 305
WERAM-Orr-0015 ORUFI01G48490.1 Oryza rufipogon 64 9e-83 303
WERAM-Ors-0011 OS01T0965500-01 Oryza sativa 64 1e-82 303
WERAM-Orbr-0019 OB01G54220.1 Oryza brachyantha 62 6e-81 297
WERAM-Sem-0042 EFJ28497 Selaginella moellendorffii 60 1e-74 277
WERAM-Php-0094 PP1S403_14V6.1 Physcomitrella patens 58 5e-73 271
WERAM-Amt-0073 ERN19309 Amborella trichopoda 75 2e-69 259
Created Date 25-Jun-2016