WERAM Information

Tag Content
WERAM ID WERAM-Tra-0194
Ensembl Protein ID Traes_5BL_3EF68006A.2
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Traes_5BL_3EF68006A Traes_5BL_3EF68006A.2 Traes_5BL_3EF68006A.2
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 2.30e-25 92.1 121 378
Organism Triticum aestivum
Domain Profile
  HDAC Class-I
            class-1.txt  33 LvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycq..litGasleaakkLnk 118
                            L  ++  s+ lei +   as ++++++hs  yi+ l+k  ++  +e         ++   P +     +++  l++Ga ++ ++ +  
  Traes_5BS_F36388166.1 121 LTPKHRGSQVLEIQNFYPASLDDVARVHSRTYITGLEKAMSKALDEGL-----IFIEGTGPTYATQTTFTEslLSAGAGITLVDSVVA 203
                            334566678899999999******************998877776544.....45788888877766665422789998888877765 PP
            class-1.txt 119 keadiainwaGGl.......hhakkseasGfcyvnDivlail..ellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhkygeef 197
                             + ++++    G+       hha  +   Gfc   +i +a    + ++ +krv+ id+d+hhG+g  +afy    ++ +s h+ g   
  Traes_5BS_F36388166.1 204 AS-KLGLSPPLGFalirppgHHAVPEGPMGFCVFGNIAVAARyaQCQHGLKRVMIIDFDVHHGNGTCDAFYDDPDIFFLSTHQLGS-- 288
                            43.33333322222222333**************99999876114556789***********************************.. PP
            class-1.txt 198 fPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfn 285
                            +PgtG+++ +g+++g   ++n+Pl  g  D s++  f +vi +  ++f+P+++++  G D+   D+l+  ++++ ++    + +k+  
  Traes_5BS_F36388166.1 289 YPGTGKMNLIGQGSGEGTTLNLPLPGGSGDYSMRCAFDEVIAPSAQRFKPDIILVSAGYDAHVLDPLAGLQFTTGTFYMLASSIKQLA 376
                            9********************************************************************9999887766666666654 PP
            class-1.txt 286 lp 287
                             +
  Traes_5BS_F36388166.1 377 RE 378
                            33 PP
Protein Sequence
(Fasta)		MVGVEPPAPP SRTPIAARLA ARGVRPRRVS ARRSWPPGCG RFRAAPPAPE AGDGERGATN 60
GVIQGRVEEA ASHAGVASAA ARPQPDTEGL AERTKEVGDA IDAVVVSSAA CNGDLPHAPP 120
QPETMPEERK EGRETHMDRA GVSPVVCNGD LPHALPQPET EGMVQMRKEG GEAHMDTADV 180
PSVASNRDLP HTPLQPETMV VVRKEGGEAQ SSSGGDARGQ AESSAIEVMP LAFAAPKSFA 240
VAAANGSVEN GGDGAESLLM EGNRGLGSGR LVREEDVAGN GNGSVMENRT GNGELERKED 300
GHDTVRKKRW LMSAVNPPPK RRAISAVRNF PPGCGRDAVT GTGSRVEEGS VLEATPISFA 360
TRGASVVDAL TTAPVSGHGA SSMVVRDASS EEVQGKRAEV VGAGDGEVRG KFDGSLRKGT 420
PKTYVRSRFV DAKTKGKRPK NVAMNDTLRD DVGVSGDGTL KNRNSRDDVR SNSNTEHGVV 480
KLKSYGIGKD SLISSSKESK CGNHDMTNQS EETDDLTLIS DKLIVQALMA PDKCPWTKGR 540
KSNASASNSL TPRNKSLPPK KPKKKDATPR KELPPKVTPS TSAVHEKIEH GEYSCLEDDD 600
NPMALVVPER KELCVTLPPC APFGDQSVDA RSKVRKLLKL FQLICRKLMQ AEEQQLRNVG 660
RIDLEAVEVL KKYDGYSKPD AIVGNVPGVV VGDEFHFRVE LSIVGLHRIY QGGIDSAIVD 720
GTRIAISIVA SGGYPDELSS SDELIYTGSG GKATGKKEAE DQKLKGGNLA LKNCIKTKTP 780
VRVIHGFKGQ SRSEVGHSKS KQISTYTYDG LYVVMDCWQE GASGSMVFKY KLKRIPGQPE 840
LALHIVKETR MSKVRKGLRC PDISLEKERI PICVINTIDD AQPTPFEYIT KVIYPPSYAK 900
EPPQGCDCTD GCSDSSRCAC AVKNGGEIPF NFNGAIVHAK PLIYECGPSC RCPPTCHNRA 960
SQHGIKIPLE IFKTGETGWG VRSLSSISSG SFICEYAGEL LQDTEAEKRE NDEYLFDIGH 1020
NYDDEELWKG LPSMIPGLES STSETMEETV GFTIDAAKCG NIGRFINHSC SPNLYAQNVL 1080
WDHDDKRMPH IMFFAAENIP PLQELTYHYN YTIGQVRDKN GVEKLNYYLL LHFEEHINSN 1140
S 1141
Nucleotide Sequence
(Fasta)		GTGTTCTGAT GGTGGGGGTG GAGCCGCCGG CGCCGCCCTC GCGGACGCCC ATCGCCGCGC 60
GGCTGGCGGC CCGCGGGGTC AGGCCGAGGA GGGTCTCCGC CAGGCGCTCC TGGCCGCCCG 120
GCTGCGGCCG CTTCCGCGCT GCTCCGCCTG CCCCCGAGGC CGGCGACGGC GAGAGGGGCG 180
CCACCAATGG CGTCATCCAG GGCAGAGTGG AGGAGGCGGC CAGTCACGCG GGCGTTGCCT 240
CGGCGGCGGC CCGGCCTCAA CCGGATACTG AAGGGTTGGC GGAGAGGACG AAGGAGGTTG 300
GAGATGCAAT CGACGCCGTC GTTGTTTCAT CGGCAGCGTG CAACGGCGAC CTCCCTCACG 360
CCCCGCCTCA GCCGGAGACG ATGCCAGAGG AGAGGAAGGA GGGCAGAGAG ACACACATGG 420
ACAGGGCCGG TGTTTCCCCC GTGGTGTGCA ACGGTGACCT CCCGCACGCC CTGCCTCAGC 480
CGGAGACCGA GGGGATGGTG CAGATGAGGA AGGAGGGTGG AGAGGCACAC ATGGATACTG 540
CCGATGTTCC CTCTGTGGCA AGTAACAGAG ATCTTCCACA CACGCCGCTT CAGCCGGAGA 600
CCATGGTGGT GGTGAGGAAG GAAGGTGGAG AGGCGCAATC GTCCAGCGGT GGCGATGCCC 660
GCGGTCAGGC AGAAAGCAGC GCGATCGAGG TGATGCCGCT GGCGTTTGCT GCCCCGAAGA 720
GTTTTGCTGT TGCTGCTGCC AATGGTTCCG TCGAGAATGG GGGAGATGGG GCTGAGTCAT 780
TGCTGATGGA GGGGAACAGA GGCCTGGGGA GTGGTCGATT GGTCAGGGAG GAGGATGTGG 840
CTGGCAATGG CAATGGCAGT GTGATGGAAA ACAGAACGGG TAATGGTGAA TTGGAGAGAA 900
AAGAGGATGG GCATGATACA GTGAGAAAGA AGAGGTGGTT GATGTCTGCT GTAAATCCCC 960
CTCCCAAGAG GAGGGCCATC TCAGCTGTAC GCAATTTTCC ACCTGGCTGT GGGAGGGATG 1020
CTGTTACTGG AACTGGCAGC AGAGTTGAGG AAGGGTCAGT ATTGGAAGCC ACGCCTATCA 1080
GTTTCGCTAC AAGGGGCGCC TCTGTAGTGG ATGCCTTGAC CACGGCTCCA GTTTCAGGTC 1140
ATGGTGCTTC CTCGATGGTC GTGAGAGATG CTTCCAGTGA GGAGGTGCAA GGCAAAAGAG 1200
CAGAGGTTGT AGGAGCGGGT GATGGTGAGG TGAGAGGCAA ATTCGATGGA AGCTTGCGGA 1260
AAGGTACTCC TAAGACTTAT GTGAGAAGTC GTTTTGTTGA TGCAAAGACA AAGGGCAAAC 1320
GACCAAAGAA TGTCGCAATG AATGATACAT TGCGAGATGA TGTTGGGGTC TCTGGAGACG 1380
GCACGCTGAA AAACAGGAAT TCAAGAGATG ATGTGCGCTC AAATAGTAAC ACGGAGCATG 1440
GCGTTGTGAA GTTGAAGAGT TATGGCATAG GCAAGGACTC TTTGATCAGC TCTTCTAAGG 1500
AGTCCAAGTG TGGAAATCAT GATATGACCA ATCAAAGTGA AGAAACCGAT GATTTGACCT 1560
TAATTAGTGA CAAGCTAATC GTACAAGCAT TGATGGCTCC AGACAAATGC CCATGGACAA 1620
AAGGAAGGAA GTCTAATGCT AGTGCTTCCA ACTCTCTTAC TCCTAGGAAC AAGTCTCTTC 1680
CTCCTAAGAA ACCAAAGAAA AAGGACGCTA CTCCAAGGAA AGAATTGCCC CCCAAAGTGA 1740
CACCTTCTAC ATCGGCCGTG CATGAGAAAA TTGAGCATGG AGAGTACTCT TGCTTGGAAG 1800
ATGATGACAA CCCTATGGCA TTAGTTGTCC CTGAAAGGAA AGAATTGTGT GTCACTCTCC 1860
CTCCTTGTGC TCCTTTTGGG GACCAAAGTG TTGATGCTCG AAGCAAAGTT AGGAAGTTGC 1920
TCAAGTTGTT CCAGTTGATA TGTCGGAAGC TTATGCAAGC CGAGGAACAA CAATTACGTA 1980
ATGTTGGAAG GATTGACCTT GAGGCCGTTG AAGTTCTAAA GAAGTATGAT GGATATTCTA 2040
AACCTGATGC TATCGTGGGC AATGTTCCCG GTGTTGTTGT TGGTGATGAA TTTCATTTTA 2100
GAGTTGAGTT GTCGATAGTT GGACTACATA GGATATACCA AGGTGGCATT GACTCCGCCA 2160
TTGTGGATGG TACCCGCATT GCAATAAGCA TTGTCGCTTC CGGTGGGTAT CCCGATGAGT 2220
TGTCTAGCTC GGACGAGTTA ATATATACCG GCTCCGGAGG TAAAGCCACC GGCAAGAAGG 2280
AGGCAGAGGA TCAAAAGCTT AAGGGTGGTA ATCTTGCCTT GAAGAATTGC ATCAAAACTA 2340
AGACTCCGGT CCGAGTGATT CATGGGTTCA AAGGTCAAAG TAGAAGTGAA GTTGGGCATT 2400
CTAAATCCAA GCAAATATCG ACATACACTT ATGATGGGTT ATATGTGGTG ATGGATTGTT 2460
GGCAAGAAGG AGCAAGTGGC TCGATGGTCT TCAAGTACAA GTTAAAAAGG ATCCCGGGTC 2520
AACCTGAATT AGCTTTACAC ATAGTCAAGG AAACAAGGAT GTCTAAAGTT CGTAAAGGTC 2580
TTCGCTGTCC TGATATATCT CTAGAGAAAG AAAGGATTCC CATATGTGTG ATCAACACAA 2640
TTGATGACGC GCAGCCAACA CCATTTGAGT ATATCACCAA AGTCATATAT CCACCGTCGT 2700
ATGCAAAAGA ACCTCCGCAA GGCTGTGATT GCACCGACGG TTGCTCGGAC TCTAGTAGAT 2760
GTGCTTGTGC AGTGAAGAAT GGAGGAGAAA TCCCATTCAA TTTTAATGGT GCAATTGTTC 2820
ACGCAAAGCC GCTCATATAT GAGTGTGGCC CATCTTGCAG GTGCCCTCCA ACATGCCACA 2880
ATAGGGCGAG CCAGCATGGT ATCAAAATTC CGCTGGAAAT ATTCAAGACT GGGGAGACAG 2940
GTTGGGGTGT AAGATCTCTC AGTTCTATCT CTTCAGGCAG TTTCATATGC GAGTATGCAG 3000
GTGAGCTATT GCAAGACACA GAAGCTGAAA AGAGAGAGAA CGATGAGTAC CTGTTTGATA 3060
TTGGTCATAA CTACGATGAT GAAGAACTTT GGAAGGGGCT TCCATCGATG ATTCCAGGTT 3120
TAGAATCTTC TACCTCTGAG ACAATGGAGG AGACTGTGGG CTTCACAATA GATGCTGCAA 3180
AGTGCGGTAA CATCGGAAGA TTCATCAACC ATAGCTGCTC CCCAAACCTG TATGCCCAAA 3240
ATGTCCTCTG GGACCATGAT GACAAGAGGA TGCCGCACAT TATGTTTTTT GCTGCTGAGA 3300
ACATTCCTCC GCTTCAAGAG CTGACTTACC ACTACAATTA TACAATAGGT CAAGTCCGTG 3360
ACAAGAATGG TGTGGAGAAG TTGAACTATT ATTTGTTACT GCATTTTGAA GAACATATAA 3420
ACTCCAATAG CTGACCCTTT TTGGGTGTTT GGGAGACTTT GAAAGAGTAG TATGAAGTGT 3480
CCAGAATCAA GCATTTTGGC GTTGCACATT CTCCTGTTGA AATCTTCACA TGGACCTGGA 3540
GGATACAAAT ATGCAATGAT TAGCTTGTAT GGAGCTTTGC ACTGAACATG CTACTAGTAG 3600
TAGGACTAAA GATGGTGGCT ACAAGTGCTC GGAGCTGTGT CGACTTCCAG TTGCGATGCC 3660
GGGGACAGAC TGAATGATAA ATTGCTTCTG CACAAGGACT GCCCTGCATC ATTTTGCTCA 3720
ACTGTGGATC GCAAGGCTGT AGCAAGCTGC CGATAGAAGT TGTGGGTTCA TGCCCCTTTT 3780
TTTGTCTTTA TAAAAATGAA TTTTGTGGAT CCAATAGTGA GCTGCCCTGT CTTAAAGAGT 3840
TGCAGCTCTT CCTGCATGTA AAGTTTTCAG TGTTGGTTTG GACCATCAGA TAGACTTGCT 3900
GGAGTTGTTT CTCAGATGCT ACCATGCAAC TTCAGGAAAT ATAGAACATT CCTACTATTC 3960
C 3962
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Aet-0076 EMT10007 Aegilops tauschii 96 0.0 1876
WERAM-Hov-0073 MLOC_59632.1 Hordeum vulgare 87 0.0 1679
WERAM-Brd-0107 BRADI4G28792.1 Brachypodium distachyon 67 0.0 1349
WERAM-Orm-0092 OMERI09G05880.1 Oryza meridionalis 55 0.0 955
WERAM-Orr-0105 ORUFI09G07880.1 Oryza rufipogon 54 0.0 944
WERAM-Sei-0101 Si028728m Setaria italica 54 0.0 944
WERAM-Orgl-0098 OGLUM09G07810.1 Oryza glumaepatula 54 0.0 941
WERAM-Orl-0090 KN540051.1_FGP003 Oryza longistaminata 54 0.0 937
WERAM-Orb-0102 OBART09G07450.1 Oryza barthii 55 0.0 934
WERAM-Sob-0027 Sb02g022936.1 Sorghum bicolor 54 0.0 929
WERAM-Lep-0098 LPERR09G05040.1 Leersia perrieri 53 0.0 922
WERAM-Zem-0104 GRMZM2G300955_P01 Zea mays 53 0.0 919
WERAM-Orbr-0107 OB09G14850.1 Oryza brachyantha 52 0.0 908
WERAM-Ors-0090 OS09T0362900-01 Oryza sativa 56 0.0 887
WERAM-Ori-0109 BGIOSGA030599-PA Oryza indica 56 0.0 881
WERAM-Org-0097 ORGLA09G0054000.1 Oryza glaberrima 56 0.0 876
WERAM-Orp-0095 OPUNC09G06250.1 Oryza punctata 52 0.0 867
WERAM-Tru-0080 TRIUR3_29767-P1 Triticum urartu 62 0.0 710
WERAM-Orni-0091 ONIVA08G14800.1 Oryza nivara 62 0.0 686
WERAM-Prp-0019 EMJ11616 Prunus persica 46 3e-177 620
WERAM-Viv-0003 VIT_00s0309g00020.t01 Vitis vinifera 53 6e-174 609
WERAM-Pot-0036 POPTR_0003s08130.1 Populus trichocarpa 46 5e-173 606
WERAM-Amt-0001 ERN01091 Amborella trichopoda 44 3e-171 600
WERAM-Sol-0078 Solyc06g060960.1.1 Solanum lycopersicum 43 4e-168 589
WERAM-Thc-0040 EOY24196 Theobroma cacao 44 3e-164 577
WERAM-Glm-0122 GLYMA11G04071.1 Glycine max 44 1e-163 575
WERAM-Met-0121 AES94344 Medicago truncatula 58 6e-162 569
WERAM-Sot-0083 PGSC0003DMT400068350 Solanum tuberosum 51 2e-161 567
WERAM-Bro-0077 Bo4g150950.1 Brassica oleracea 56 2e-149 528
WERAM-Brr-0150 Bra030212.1-P Brassica rapa 55 5e-149 526
WERAM-Arl-0007 Al_scaffold_0004_216 Arabidopsis lyrata 54 3e-144 510
WERAM-Art-0041 AT2G22740.2 Arabidopsis thaliana 54 4e-141 500
WERAM-Sem-0004 EFJ22703 Selaginella moellendorffii 44 4e-98 357
WERAM-Php-0129 PP1S9_150V6.1 Physcomitrella patens 41 3e-97 354
Created Date 25-Jun-2016