WERAM Information

Tag Content
WERAM ID WERAM-Tra-0189
Ensembl Protein ID Traes_5BL_19FF81B34.2
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Traes_5BL_19FF81B34 Traes_5BL_19FF81B34.2 Traes_5BL_19FF81B34.2
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 7.10e-25 90.5 223 441
Organism Triticum aestivum
Domain Profile
  HDAC Class-I
            class-1.txt  19 khpmkpkrlslt.heLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqli 105
                             hp +p+rl+ +  +L+ +     k  +v p++ ++eel+ +h+ +++e +++ ++   + ++  +  ++ g+ +   +     c+  
  Traes_5BS_0689D61CC.1 223 PHPERPNRLRAIaASLAAAGIFPSKCALVPPREITKEELVMVHTSDHVESVEQTKNMLYSYFT--SDTYANGHSACAAKLAAGLCADL 308
                            589999999876156777777789999*******************99999887776666666..66788888877777777777665 PP
            class-1.txt 106 tGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellk.khkrvlyididlhhGDgveeafyttdrvmtvsfhk 192
                              asl  +++++++ a   +    G hha  ++a Gfc  n+  +a l  +k   k+vl +d d+hhG+g +e f+  + v+ +s+h+
  Traes_5BS_0689D61CC.1 309 --ASLIVSEHVQNGFA---LVRPPG-HHAGVKQAMGFCLHNNAAVAALAAQKaGAKKVLIVDWDVHHGNGTQEIFEGNKSVLYISLHR 390
                            ..46666666666554...444444.999999*****************9996799******************************** PP
            class-1.txt 193 ygee.ffPgtGdlsdvgaekgkyyavnvPlk.dgidDesyekifksviskv 241
                            ++++ f+PgtG  ++vg+ +gk ++vn+P +  g+ D+ y   f++v+ ++
  Traes_5BS_0689D61CC.1 391 HEDGsFYPGTGAADEVGVLDGKGFSVNIPWScGGVGDNDYIFAFQHVVLPI 441
                            *985499**********************98368**********9999765 PP
Protein Sequence
(Fasta)		MEYGPSDSSG TDDDLPPPYP NNPNNRSIRG SGRASGNGRA IVPVSGNGRA IAPASSYPRA 60
QTDMETQIQQ LEQEAYCAVL RAFKAQSDAL TWEKEGLITE LRKELRVSDK EHREVLNRVN 120
GDDIIRSIRE WRSTGGLQAS LPNNPQPIHH DPAPSPTTSG RKRQKTSQSV PPLPVPSPPV 180
MHPQQMATPT QPSSSAAKKG FLPGTKGKKT KPGQKIPGGS AVKSMPPTAG PSGRGPHMNR 240
NFPGRPAAPE PSQGQHHLNP LIGRKVMSRW PEDNNFYEAT ITDYNAEKDV YALVYDINTA 300
NETWEWVDFK EIKPEDIIWQ GEDPGLYQGG RGAPGSGGKK STSRVMPTPG AGRGRGFQKN 360
VSKKDFPRSQ NGVGKRSSDD IDILHTESLI KEVERVFSVS HPDPLEVDKA KKALKEQEQS 420
LIDAIARLAE ASDGESDERN RGRRMGPYGG HPHQGNYADA MAVDGDHMVG GAAT 474
Nucleotide Sequence
(Fasta)		TTTTCTTCTC TCTCTTCGAC CCCCCTGTTT TTTTTTCTCT CGGCGAGAAA GAATCCCCAT 60
ACTTGGCAGT ACTACCTCCT CTTCCCCACT CGGTCGGACC ACCACCTCGC CTCCCCCCAA 120
ATCTCGCCGG ATTCCGCCGC CTGCACGCGC GCCGGAGGTC CTGACAAAAA TCGCCCGGAG 180
CTCGCGCGCG TCTCCCCCGG GGTGGTCGCC CGGCGCGGCG CCGAGCCATG GAATACGGGC 240
CCTCGGACAG CAGCGGAACT GATGATGACC TTCCACCACC ATATCCGAAT AATCCGAATA 300
ATAGGAGTAT AAGAGGCAGC GGGCGTGCCA GTGGTAATGG CAGAGCTATT GTTCCTGTCA 360
GTGGTAATGG AAGGGCCATT GCTCCTGCCA GCTCATACCC TAGAGCCCAG ACCGATATGG 420
AAACACAAAT TCAACAGCTT GAGCAAGAAG CGTATTGTGC AGTTCTGCGT GCTTTTAAAG 480
CTCAGTCTGA TGCCCTCACA TGGGAGAAGG AGGGTCTGAT TACTGAACTT AGGAAGGAGC 540
TAAGGGTATC CGACAAAGAA CACAGGGAGG TGCTAAACAG GGTCAATGGT GATGATATTA 600
TCCGCAGCAT AAGGGAATGG AGATCAACAG GAGGCCTTCA GGCAAGCTTA CCCAATAATC 660
CTCAGCCTAT ACATCATGAC CCGGCGCCTA GCCCTACCAC CTCTGGCCGT AAAAGGCAAA 720
AGACATCTCA ATCCGTTCCT CCCCTACCTG TACCGTCTCC TCCTGTTATG CATCCACAGC 780
AGATGGCTAC ACCAACACAA CCTTCATCTT CAGCAGCTAA AAAGGGATTT CTGCCAGGCA 840
CTAAAGGCAA AAAGACAAAA CCAGGCCAGA AGATACCAGG GGGCTCTGCA GTCAAATCTA 900
TGCCACCTAC AGCAGGTCCC AGCGGAAGGG GACCACATAT GAACAGAAAC TTTCCTGGTC 960
GCCCTGCTGC TCCTGAACCT TCTCAAGGAC AGCATCATCT TAATCCTTTA ATTGGCCGTA 1020
AAGTCATGTC TCGGTGGCCT GAAGATAATA ATTTCTATGA AGCCACTATA ACTGATTACA 1080
ATGCGGAAAA GGACGTTTAT GCGCTAGTTT ATGACATAAA TACAGCTAAT GAGACCTGGG 1140
AGTGGGTTGA TTTTAAAGAG ATAAAACCAG AAGACATAAT CTGGCAAGGC GAGGACCCAG 1200
GATTATATCA AGGAGGTCGT GGTGCTCCAG GTAGCGGGGG TAAGAAGTCA ACTAGCCGTG 1260
TTATGCCCAC ACCAGGTGCA GGTAGGGGGA GAGGATTCCA AAAGAATGTG TCGAAGAAAG 1320
ACTTTCCACG TTCGCAAAAT GGCGTTGGGA AGAGAAGTTC TGATGACATT GATATACTTC 1380
ACACTGAAAG CCTGATAAAA GAGGTGGAGA GGGTCTTCAG TGTTAGTCAT CCTGATCCTT 1440
TGGAGGTAGA CAAGGCAAAG AAAGCGCTGA AGGAGCAAGA ACAGTCGTTG ATTGATGCGA 1500
TAGCAAGGCT TGCTGAGGCA TCTGATGGCG AAAGTGATGA GCGCAACCGT GGCCGTAGGA 1560
TGGGGCCATA TGGTGGGCAC CCGCATCAAG GAAACTATGC GGATGCCATG GCTGTTGATG 1620
GCGACCACAT GGTCGGAGGC GCCGCCACAT AAACGGATTG CTGGAACATG TATACACAAA 1680
TTCGATTAGA AGCCCGTCCT GTTGTAAAAT CTTATTTGCT AATGTTTATT TAAAACTTAG 1740
CCATAGGTTG AAACCATCTG GTTTTGAGAG ACGATCAGTT TTTGTTCTCT TCTTTTTTTT 1800
GGGGTAGAAC TGCTTAACGT GTTGTAAAGC TGCTGCTCTG CGGAGCTATT GTGCTTCTTG 1860
TCATTGCACA AGTGATAGTG CAGTGGTGAT TGATTAGACC AGGACATTTG ACCTCTTCTT 1920
TTCGGAACAT TGCTAACCTT TTCATTATTC CGGAATCATG TCTTATTCAT GTCATTATCT 1980
ACAATCGTTA TGTGAGAGTA CACACTAGGC TATATTTACA TGATCATACA GCC 2034
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Tru-0020 TRIUR3_09050-P1 Triticum urartu 99 0.0 784
WERAM-Aet-0094 EMT19648 Aegilops tauschii 99 0.0 782
WERAM-Hov-0091 MLOC_68440.1 Hordeum vulgare 96 0.0 773
WERAM-Sob-0023 Sb02g018570.1 Sorghum bicolor 72 4e-161 565
WERAM-Zem-0037 GRMZM2G049155_P01 Zea mays 71 1e-158 556
WERAM-Sei-0050 Si013860m Setaria italica 66 2e-120 430
WERAM-Bro-0066 Bo4g021690.1 Brassica oleracea 48 5e-82 302
WERAM-Brr-0021 Bra004832.1-P Brassica rapa 46 4e-65 246
Created Date 25-Jun-2016