WERAM Information

Tag Content
WERAM ID WERAM-Tra-0178
Ensembl Protein ID Traes_5AL_CFC7D4C4F.2
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Traes_5AL_CFC7D4C4F Traes_5AL_CFC7D4C4F.2 Traes_5AL_CFC7D4C4F.2
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 1.80e-20 76.1 20 147
Organism Triticum aestivum
Domain Profile
  HDAC Class-I
            class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae.....elskel 83 
                            ++v+y+yd+ ++++ yg++h m+p+r++++h Lv +ygl  ++e+++ + a+ +el  fh ++y+++l+ ++p+  +     ++ ++ 
  Traes_5BL_BD8B584C3.1  20 RRVCYYYDPGIANVDYGADHHMVPRRVAMAHALVEKYGLLADMERLRIRPATEAELRAFHDDAYVRLLRDITPDAYHghrdgDIRDRA 107
                            589***********************************************************************99966666444444 PP
            class-1.txt  84 kkfnvge........dcPvfdglfeycqlitGasleaakk 115
                            +  ++g         d Pv+dgl++yc  ++G+sl+aa+ 
  Traes_5BL_BD8B584C3.1 108 TACQLGVpgtdaaayDNPVIDGLWDYCLRYAGGSLAAASA 147
                            44444322233444599*******************9975 PP
Protein Sequence
(Fasta)		MLKRDDSNHE TESKREEVGG ATEAHNHMQE SQVVNCVAPD DFADRPQNYV GHGASPILRR 60
DNSNNETEGK REEVGGATEA HNHMQESQVV NCITPDDFAD RTRNYVGHGA SPILRRDDSN 120
HETEGKREEV GGATEAHNHM QESQVVNCVT PDDFVDRPRN YVGHGASPVL RRDDSNHETE 180
GKRKEVGGAT GAHNHTQESQ VINCVAPDDF ADRPRNYAGH GASPILRRDD SNVDIEGKIE 240
EVGGATEAHN EKIQESQVVN VIVQDGFARG QRGHDNPLND VTDDSPRHSF SEQMNGRRLL 300
RERKRAPLVV GNTEIRSRRE GRVHDGTPRT HPRGPLNVKR KGKSAEIVKI NVTLVDDAGV 360
IDVIRSASKC GEHVATNQIE DKDGVGLNTN RVIIQALMAP DRCPWTQRKK SIASVPKSLG 420
PRKNVKKKVA TPRKELHSKV TPSTPARRKA REGGEDSSSK DDEKSLARLA HERNNKSCVN 480
ISRCPPSDEV SVHKIDERSR LSDPKDVPLV AGVVDVKTKC EGSLQEGTPR NHVRALVNVK 540
TKGKKPDNVK VNVTLLDDRR VFEDDKTRNQ ISRTRRGVAR SSNIKNVKKG MFAHKRDGID 600
KDSGNKFTKE SKCGDHLQTD QIKENDNVGL VTNKMTVLAL MAPDKCLWTE GKRSIVGVSQ 660
SLTCRNNNSL TVHEGLCLSD ISQGKESIPI CVINTIDGVL PTPFKYITKV IYPPSYAKAP 720
SIGCDCTNGC SDSSECACAV KNGGEIPFNL NSAIVYTKPL IYECGPSCRC PPTCHNRVSQ 780
HGPKVPLEIF KTGKTGWGVR SLSFIPSGSF VCEYVGEVLQ ETEAERTEND EYLFDIGRDD 840
DDDDDDDDDD DDDEEKDSQS SKSEMTAEGL GYTIDAAKCG NVGRFINHSC TPNMHAQDVL 900
WDHDDKRMPH VMLFAEKNIR PLQELTYDYN YNIGNVRKNG KVKEKKCFCG SSKCRLRLY 959
Nucleotide Sequence
(Fasta)		ACCGGCATCG GCGTCAGAGG TTGTGGTGTT TCTCTGATGT TGAAGCGAGA TGATTCTAAT 60
CACGAAACAG AAAGCAAAAG AGAAGAGGTC GGAGGTGCCA CCGAGGCACA CAATCATATG 120
CAAGAATCTC AAGTCGTCAA TTGTGTTGCT CCAGATGATT TTGCAGACCG TCCGCAAAAT 180
TATGTTGGTC ATGGCGCTTC TCCGATTTTG AGGCGAGATA ATTCTAATAA TGAAACAGAA 240
GGCAAAAGAG AAGAGGTCGG AGGTGCCACC GAGGCACACA ATCATATGCA AGAATCTCAA 300
GTCGTCAATT GTATCACTCC AGATGATTTT GCAGACCGTA CGCGAAATTA TGTTGGTCAT 360
GGTGCTTCTC CGATTTTGAG GCGGGATGAT TCTAATCACG AAACGGAAGG CAAAAGAGAA 420
GAGGTCGGAG GTGCCACCGA GGCACACAAT CATATGCAAG AATCTCAAGT CGTCAATTGT 480
GTCACTCCAG ATGATTTTGT AGACCGTCCA CGAAATTATG TTGGTCATGG TGCTTCTCCA 540
GTTTTGAGGC GAGATGATTC TAATCACGAA ACAGAAGGCA AAAGAAAAGA GGTCGGAGGT 600
GCCACCGGGG CACACAATCA TACGCAAGAA TCTCAAGTCA TCAATTGTGT CGCTCCAGAT 660
GATTTTGCAG ACCGCCCACG AAATTATGCT GGTCATGGTG CTTCTCCGAT TTTGAGGCGA 720
GATGATTCTA ATGTGGATAT AGAAGGCAAA ATAGAAGAGG TTGGAGGAGC TACCGAGGCA 780
CACAATGAGA AGATCCAAGA ATCTCAAGTC GTCAACGTTA TTGTTCAAGA TGGTTTTGCA 840
AGAGGCCAAC GCGGCCATGA TAATCCGCTA AATGATGTTA CAGACGACTC ACCAAGACAT 900
AGTTTCTCAG AGCAGATGAA TGGTAGAAGA CTATTACGTG AAAGGAAGCG CGCACCACTA 960
GTAGTGGGGA ACACTGAGAT TAGAAGCAGA CGCGAAGGAC GTGTGCATGA TGGCACTCCG 1020
AGGACTCATC CAAGAGGCCC ACTTAATGTG AAGAGAAAGG GCAAGAGTGC AGAGATTGTC 1080
AAGATCAATG TGACATTGGT AGATGATGCA GGGGTGATTG ACGTGATACG CTCGGCATCC 1140
AAGTGTGGAG AGCATGTTGC GACCAATCAA ATTGAAGATA AGGATGGTGT GGGCCTTAAT 1200
ACTAATAGGG TAATTATACA AGCATTGATG GCTCCAGACA GATGCCCTTG GACGCAACGA 1260
AAGAAATCTA TTGCCAGTGT TCCTAAATCG CTTGGTCCTA GGAAAAATGT GAAGAAAAAG 1320
GTTGCTACTC CAAGGAAAGA ATTGCACTCC AAAGTTACCC CTTCTACACC GGCTAGGCGC 1380
AAGGCAAGAG AGGGCGGAGA AGATTCCTCC TCAAAAGATG ATGAGAAATC TTTGGCACGA 1440
CTTGCGCATG AAAGAAATAA TAAATCATGC GTCAACATCT CTCGATGTCC TCCTTCCGAC 1500
GAGGTGAGTG TTCATAAGAT TGATGAGAGA AGTCGATTGA GCGATCCAAA GGATGTACCA 1560
CTTGTAGCGG GGGTTGTTGA TGTAAAAACC AAATGTGAAG GAAGCTTGCA AGAAGGTACT 1620
CCGAGGAACC ATGTGAGAGC TCTTGTTAAT GTGAAGACAA AGGGCAAGAA ACCAGATAAT 1680
GTCAAGGTGA ATGTGACATT GTTAGATGAT AGGCGGGTCT TTGAAGATGA CAAGACGAGA 1740
AACCAAATTT CAAGAACTCG GAGAGGAGTG GCGCGCTCCT CAAATATTAA AAACGTGAAG 1800
AAAGGCATGT TTGCTCATAA GCGCGATGGC ATCGACAAGG ACTCTGGGAA TAAGTTCACA 1860
AAGGAGTCTA AGTGTGGGGA TCATCTTCAG ACTGATCAAA TTAAAGAAAA TGATAATGTC 1920
GGCCTTGTTA CCAACAAGAT GACTGTATTA GCATTGATGG CTCCTGACAA ATGCCTGTGG 1980
ACAGAAGGGA AGAGGTCTAT TGTTGGTGTT TCTCAGTCTC TCACTTGTAG GAATAATAAC 2040
TCTCTTACCG TTCATGAAGG CCTTTGTTTG TCTGACATAT CTCAAGGAAA AGAGAGCATT 2100
CCCATATGTG TGATCAACAC AATTGATGGC GTGCTGCCAA CGCCATTTAA GTACATCACC 2160
AAAGTCATAT ATCCGCCCTC ATATGCAAAA GCACCTTCAA TAGGCTGTGA CTGCACTAAT 2220
GGTTGCTCGG ACTCTAGTGA ATGTGCTTGT GCTGTGAAAA ATGGAGGGGA GATCCCATTC 2280
AATTTGAATA GCGCAATTGT TTATACAAAG CCTCTCATAT ATGAGTGTGG CCCATCATGC 2340
AGGTGCCCAC CAACATGCCA CAATAGGGTG AGCCAGCACG GCCCCAAAGT TCCACTGGAA 2400
ATATTCAAGA CTGGGAAGAC AGGTTGGGGT GTAAGATCCC TCAGTTTTAT CCCTTCAGGT 2460
AGTTTCGTAT GTGAGTATGT AGGTGAGGTA TTGCAAGAGA CAGAAGCTGA GAGGACAGAA 2520
AATGATGAGT ACCTTTTTGA TATTGGTCGT GACGATGACG ATGACGATGA TGATGACGAT 2580
GACGATGATG ACGATGAAGA AAAAGATTCA CAATCTTCTA AATCCGAGAT GACAGCGGAG 2640
GGCTTGGGCT ATACAATAGA TGCTGCAAAG TGTGGTAATG TTGGAAGATT CATCAACCAT 2700
AGCTGCACTC CAAACATGCA TGCACAGGAT GTTCTCTGGG ACCATGATGA TAAGAGGATG 2760
CCGCATGTTA TGCTTTTCGC CGAAAAGAAT ATCCGTCCGC TACAAGAGCT TACTTACGAT 2820
TATAATTATA ACATAGGTAA TGTGCGCAAG AATGGCAAGG TGAAGGAGAA GAAATGCTTC 2880
TGTGGTTCGT CGAAGTGCCG CCTCAGGCTT TACTAA 2917
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Tru-0044 TRIUR3_20106-P1 Triticum urartu 94 0.0 1821
WERAM-Aet-0085 EMT25277 Aegilops tauschii 83 0.0 1642
WERAM-Hov-0030 MLOC_32627.1 Hordeum vulgare 83 0.0 1232
WERAM-Brd-0105 BRADI4G28460.1 Brachypodium distachyon 59 0.0 875
WERAM-Zem-0104 GRMZM2G300955_P01 Zea mays 68 4e-114 410
WERAM-Sob-0027 Sb02g022936.1 Sorghum bicolor 69 2e-112 405
WERAM-Sei-0041 Si012231m Setaria italica 65 3e-112 404
WERAM-Amt-0001 ERN01091 Amborella trichopoda 59 2e-109 394
WERAM-Orm-0092 OMERI09G05880.1 Oryza meridionalis 69 1e-108 392
WERAM-Orbr-0107 OB09G14850.1 Oryza brachyantha 66 1e-108 391
WERAM-Orr-0105 ORUFI09G07880.1 Oryza rufipogon 67 8e-108 389
WERAM-Ori-0109 BGIOSGA030599-PA Oryza indica 67 2e-107 388
WERAM-Ors-0090 OS09T0362900-01 Oryza sativa 67 2e-107 387
WERAM-Orl-0090 KN540051.1_FGP003 Oryza longistaminata 67 2e-107 387
WERAM-Orgl-0098 OGLUM09G07810.1 Oryza glumaepatula 67 7e-107 386
WERAM-Lep-0098 LPERR09G05040.1 Leersia perrieri 60 3e-106 384
WERAM-Orb-0102 OBART09G07450.1 Oryza barthii 66 1e-105 382
WERAM-Org-0097 ORGLA09G0054000.1 Oryza glaberrima 66 3e-105 380
WERAM-Viv-0003 VIT_00s0309g00020.t01 Vitis vinifera 61 2e-103 374
WERAM-Met-0121 AES94344 Medicago truncatula 63 2e-103 374
WERAM-Prp-0019 EMJ11616 Prunus persica 61 2e-102 371
WERAM-Glm-0008 GLYMA01G41340.2 Glycine max 61 8e-102 369
WERAM-Sol-0078 Solyc06g060960.1.1 Solanum lycopersicum 59 4e-101 367
WERAM-Pot-0036 POPTR_0003s08130.1 Populus trichocarpa 61 6e-101 366
WERAM-Sot-0083 PGSC0003DMT400068350 Solanum tuberosum 59 6e-100 363
WERAM-Thc-0040 EOY24196 Theobroma cacao 60 2e-98 358
WERAM-Orp-0095 OPUNC09G06250.1 Oryza punctata 62 1e-97 355
WERAM-Orni-0091 ONIVA08G14800.1 Oryza nivara 59 1e-96 352
WERAM-Arl-0129 scaffold_402114.1 Arabidopsis lyrata 55 4e-91 333
WERAM-Art-0041 AT2G22740.2 Arabidopsis thaliana 55 2e-88 325
WERAM-Bro-0067 Bo4g038960.1 Brassica oleracea 55 2e-86 318
WERAM-Brr-0023 Bra005362.1-P Brassica rapa 55 4e-86 317
WERAM-Sem-0004 EFJ22703 Selaginella moellendorffii 49 8e-73 273
WERAM-Php-0129 PP1S9_150V6.1 Physcomitrella patens 42 1e-65 249
Created Date 25-Jun-2016