WERAM Information

Tag Content
WERAM ID WERAM-Tra-0035
Ensembl Protein ID Traes_1DS_F0BE8ABFA.2
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Traes_1DS_F0BE8ABFA Traes_1DS_F0BE8ABFA.2 Traes_1DS_F0BE8ABFA.2
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 2.20e-07 33.2 132 185
Organism Triticum aestivum
Domain Profile
  Me_Reader PHD
                PHD.txt   3 iClvCgkddegekemvqCde..CddwfHlkCvklplsslp.eg......kswyCpsCk 51 
                             C+ C+ +  +++ m+qC+   C+ w H++Cv +p    p eg       ++yC+ C+
  Traes_1DS_F0BE8ABFA.2 132 RCI-CDSKLLNDN-MIQCEDdrCHVWQHMSCVLVP--DKPtEGvgpevpPHFYCELCR 185
                            698.*66666665.****9999*************..55536688998888******8 PP
Protein Sequence
(Fasta)		MHVLPKMSCL CHFSFDLFHC PSQDKLAYFR IKELKDILHQ LGLPKQGKKQ DLIDRVLALL 60
SDEQGQRHHG WGRKNSFTKE AVAKIIDDIY SRKMQIQSAP DLATRSHTGS DLFRPKDEVN 120
DSFQPQPVTK VRCICDSKLL NDNMIQCEDD RCHVWQHMSC VLVPDKPTEG VGPEVPPHFY 180
CELCRLSRAD PMDTFGNEVI HASSFL 206
Nucleotide Sequence
(Fasta)		AAAAATTGTA AGTAACCTTT TGTAGATGTA GCATTACTCG TACCGAAATG CCCCCCAAGA 60
TTGGTAGTTT GGCTTTAGTG TTTAGTCTCC ATGCATGTCT TGCCAAAAAT GAGTTGTTTG 120
TGCCACTTTA GCTTTGACCT TTTCCATTGT CCATCACAGG ATAAACTGGC ATACTTTCGA 180
ATAAAGGAAC TCAAAGATAT CTTGCATCAG TTAGGCCTAC CAAAGCAAGG AAAGAAGCAG 240
GATCTTATTG ACAGGGTATT GGCACTGTTA TCAGATGAGC AAGGTCAAAG GCATCATGGG 300
TGGGGAAGAA AAAATTCGTT CACAAAGGAG GCAGTGGCAA AAATTATCGA TGATATATAC 360
AGCAGGAAAA TGCAAATCCA ATCTGCTCCC GATCTAGCCA CTAGGTCCCA CACTGGATCA 420
GATTTATTCC GGCCTAAAGA TGAAGTCAAC GACTCCTTCC AGCCACAGCC AGTGACTAAG 480
GTCCGCTGCA TTTGTGATAG CAAGTTGCTA AACGATAATA TGATCCAGTG TGAGGATGAT 540
CGATGCCATG TGTGGCAACA TATGAGTTGT GTGCTCGTTC CAGATAAGCC CACTGAGGGT 600
GTTGGCCCTG AAGTTCCACC CCATTTCTAC TGTGAATTAT GCCGACTAAG TCGGGCAGAC 660
CCAATGGATA CTTTTGGGAA TGAAGTTATC CATGCATCAA GCTTTCTA 709
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Org-0050 ORGLA05G0017700.1 Oryza glaberrima 78 1e-77 286
WERAM-Orgl-0049 OGLUM05G01840.1 Oryza glumaepatula 77 2e-76 281
WERAM-Orp-0048 OPUNC05G02000.1 Oryza punctata 77 8e-76 280
WERAM-Orl-0083 KN539825.1_FGP005 Oryza longistaminata 77 1e-75 280
WERAM-Orb-0050 OBART05G01770.1 Oryza barthii 78 1e-75 279
WERAM-Orni-0108 ONIVA10G12200.1 Oryza nivara 77 5e-75 277
WERAM-Orr-0050 ORUFI05G01890.1 Oryza rufipogon 77 6e-75 277
WERAM-Zem-0086 GRMZM2G155123_P01 Zea mays 71 1e-71 266
WERAM-Mua-0008 GSMUA_Achr10P13170_001 Musa acuminata 56 1e-56 216
WERAM-Arl-0112 fgenesh2_kg.8__ 2005__ AT5G60410.5 Arabidopsis lyrata 58 7e-53 203
WERAM-Art-0145 AT5G60410.1 Arabidopsis thaliana 58 7e-52 200
WERAM-Met-0101 AES88651 Medicago truncatula 59 2e-51 199
WERAM-Glm-0141 GLYMA12G07590.1 Glycine max 57 1e-48 189
WERAM-Sol-0139 Solyc11g069160.1.1 Solanum lycopersicum 56 2e-48 189
WERAM-Viv-0034 VIT_06s0004g03180.t01 Vitis vinifera 55 4e-48 188
WERAM-Brr-0105 Bra020249.1-P Brassica rapa 52 3e-47 185
WERAM-Tru-0081 TRIUR3_29937-P1 Triticum urartu 44 1e-35 146
WERAM-Sem-0144 EFJ28610 Selaginella moellendorffii 44 7e-35 144
WERAM-Hov-0075 MLOC_60545.2 Hordeum vulgare 42 5e-34 141
WERAM-Php-0135 PP1S94_39V6.1 Physcomitrella patens 41 1e-33 139
WERAM-Aet-0041 EMT28925 Aegilops tauschii 42 8e-29 124
WERAM-Sot-0100 PGSC0003DMT400088246 Solanum tuberosum 50 1e-16 83.6
WERAM-Brd-0102 BRADI4G26730.1 Brachypodium distachyon 44 4e-16 82.0
WERAM-Scp-0049 SPCC645.13.1:pep Schizosaccharomyces pombe 43 2e-07 53.1
WERAM-Scj-0025 EEB08121 Schizosaccharomyces japonicus 37 1e-06 50.4
Created Date 25-Jun-2016