Tag |
Content |
WERAM ID |
WERAM-Tra-0354 |
Ensembl Protein ID |
TRAES3BF156000040CFD_t1 |
Gene Name |
TRAES_3BF156000040CFD_c1 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDM |
JHDM2 |
3.80e-43 |
149.8 |
579 |
829 |
|
Organism |
Triticum aestivum |
Domain Profile |
HDM JHDM2
JHDM2.txt 7 gklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy.................................. 60 g lNLa klp ++ ++g kl AyG ++ ++++++tnl + + d+v +l++ Traes_4AS_93108583B.2 579 GFLNLAAKLPPDALQSEVGLKLLIAYGRQQQPGKSDSVTNLMVKMGDVVHMLMHraemrylcpkslqpeqperiangmavhvnahapv 666 679********************************************************************************99997 PP JHDM2.txt 61 ......vgilkkkwaeedlkellksieee..eldevtrkrv.qdpkekpgalWhifaakdaekirellekvskeqga...evppdhdp 136 +g ++++ ++ ++ e + + +++ ++pgalW++f+++d++ ++++l +e+ +++++p Traes_4AS_93108583B.2 667 qnlnldMGEQSPEHTVSKSCGPSAGSSAElsSSSHSEQAKTnGVERSQPGALWDVFRRQDVPMLNKYLASNWEELTNnsqAMLSVKHP 754 7766664444444444443333333333332111222222202335689*********************9999887444566799** PP JHDM2.txt 137 ihdqswyldrklrkrLfeeyGvegwtlvQklgdavlipagapHqvqnlkscvkvaedFvsPEnvkecfrltkeyr 211 i dq +yl +++++ L+++yG+e+ t+ Q +g+av+ipag+p qv+nl+s+v++a dF+sPE + e++r+ +e r Traes_4AS_93108583B.2 755 IYDQAVYLREHHKRVLKDQYGIEPRTFEQHIGEAVFIPAGCPYQVKNLQSTVQLALDFLSPESLRESARMAQEIR 829 ***********************************************************************9976 PP
|
Protein Sequence (Fasta) | MATSKVHNVD EVLNGHGGTV EPSVAAKPST QQASQCNGAT WENSSMMTRL GTGGCRKGRK 60 AVLPWRFQIG YKRPRSQGLS QDGGSDGLPA TGTSMSTDGT GASKSMDGSR HIGVAAAASV 120 PNKTKVDNGD RHRPMPKNRV AISRESLMAS LQEFRLIYRQ LVAQEKADCG KQEHDLAAFQ 180 VFRERLCVEF DDRRYLGSVP GVHVGDVFDS DAELFLVGLH RSQQSRVDYI NQNGGRTCLA 240 VSIVSYAQQS AQNNNLDFLL HVGSVAATTG QNMEGTDLAL KQSMDTKTHV RVIYRFVMTG 300 REELTYYVYG GLYLVEKFSK EKLREDKHIS TFHLRRLSGQ PSINIHELVE KRMAEPSNGT 360 FTVDISSGLE KIPISAINSI SNEAPAPFRY ISHIQYLRKY QLDPPSGCDC VGRCSDSQKC 420 ACVMKNGGKI PFRKTGGLLE EKPLIYECGP SCKCPPTCRN RVGQHGISFR LQVFKTTSMG 480 WGVRSLDFIP TGHFVCEYIG ELLDNEDAQE RDNDEYLFLI GNNYYDVSRW DNLQKTIPSL 540 MNGPGEEEEN FFAVDALKCG NLARFINHSC TPNLFTQNVL YDHDNKGMPH IMLFACEDIQ 600 PLEPLSYDYN YTIDGVHDSE GNIKKKRCLC GSVECTGWLY Protein Fasta Sequence
>TRAES3BF156000040CFD_t1|JHDM2|Triticum aestivum MATSKVHNVDEVLNGHGGTVEPSVAAKPSTQQASQCNGATWENSSMMTRLGTGGCRKGRKAVLPWRFQIGYKRPRSQGLSQDGGSDGLPATGTSMSTDGTGASKSMDGSRHIGVAAAASVPNKTKVDNGDRHRPMPKNRVAISRESLMASLQEFRLIYRQLVAQEKADCGKQEHDLAAFQVFRERLCVEFDDRRYLGSVPGVHVGDVFDSDAELFLVGLHRSQQSRVDYINQNGGRTCLAVSIVSYAQQSAQNNNLDFLLHVGSVAATTGQNMEGTDLALKQSMDTKTHVRVIYRFVMTGREELTYYVYGGLYLVEKFSKEKLREDKHISTFHLRRLSGQPSINIHELVEKRMAEPSNGTFTVDISSGLEKIPISAINSISNEAPAPFRYISHIQYLRKYQLDPPSGCDCVGRCSDSQKCACVMKNGGKIPFRKTGGLLEEKPLIYECGPSCKCPPTCRNRVGQHGISFRLQVFKTTSMGWGVRSLDFIPTGHFVCEYIGELLDNEDAQERDNDEYLFLIGNNYYDVSRWDNLQKTIPSLMNGPGEEEENFFAVDALKCGNLARFINHSCTPNLFTQNVLYDHDNKGMPHIMLFACEDIQPLEPLSYDYNYTIDGVHDSEGNIKKKRCLCGSVECTGWLY
|
Nucleotide Sequence (Fasta) | ATGGCGACCT CAAAGGTCCA CAACGTAGAT GAGGTACTCA ATGGCCATGG AGGCACCGTG 60 GAGCCAAGTG TGGCCGCCAA ACCTAGCACC CAGCAGGCCT CTCAGTGCAA CGGCGCTACG 120 TGGGAGAACA GTTCGATGAT GACGAGATTA GGTACGGGTG GTTGCCGCAA GGGGCGCAAG 180 GCCGTATTGC CATGGAGATT TCAGATTGGG TACAAGCGGC CACGGTCACA GGGTTTAAGC 240 CAGGACGGCG GATCCGATGG ACTTCCTGCA ACTGGAACTT CCATGTCCAC TGATGGTACT 300 GGAGCTTCCA AGTCCATGGA TGGTTCCAGG CATATAGGAG TTGCTGCTGC TGCTTCTGTA 360 CCCAACAAAA CGAAGGTTGA CAATGGTGAT CGTCATCGTC CAATGCCAAA GAACAGAGTC 420 GCCATCAGCA GAGAAAGCCT CATGGCTTCT TTGCAGGAAT TCCGGCTAAT TTACAGGCAG 480 CTTGTGGCCC AAGAAAAGGC CGACTGCGGT AAACAAGAAC ATGATCTTGC AGCCTTTCAA 540 GTCTTCAGGG AGAGGCTATG TGTTGAATTT GATGATAGGA GGTACTTGGG TAGCGTTCCT 600 GGAGTTCATG TTGGTGACGT GTTTGATTCG GACGCCGAGC TTTTCCTTGT TGGTCTCCAT 660 CGTTCACAGC AGTCGCGTGT TGATTACATC AATCAGAACG GGGGCAGGAC ATGTCTAGCC 720 GTTAGCATCG TGTCGTACGC GCAACAGTCT GCCCAAAATA ACAATCTGGA TTTCTTGCTA 780 CATGTTGGGT CTGTGGCTGC CACCACTGGC CAGAACATGG AAGGTACCGA CTTGGCGCTA 840 AAGCAGAGTA TGGATACCAA AACACATGTG CGTGTCATTT ATAGGTTTGT TATGACCGGC 900 CGTGAGGAGC TTACATACTA TGTTTATGGT GGTTTATATT TGGTCGAGAA ATTTAGCAAA 960 GAGAAACTGA GGGAAGACAA ACATATTAGC ACTTTTCATC TGAGAAGATT GTCGGGGCAA 1020 CCGAGCATCA ACATTCACGA ACTTGTGGAA AAAAGAATGG CTGAACCATC CAATGGAACT 1080 TTTACTGTAG ATATATCGTC AGGTCTTGAG AAGATCCCTA TATCTGCAAT CAACTCCATA 1140 TCAAACGAGG CCCCGGCTCC ATTTCGCTAC ATTTCACACA TACAATACCT CAGGAAGTAT 1200 CAGCTAGATC CTCCATCAGG TTGTGATTGT GTTGGTCGAT GTTCGGACTC GCAAAAGTGT 1260 GCATGTGTAA TGAAAAATGG TGGGAAGATC CCTTTCAGAA AGACCGGTGG TCTCCTAGAG 1320 GAAAAACCTC TTATTTACGA GTGTGGACCT TCATGCAAGT GCCCTCCAAC TTGTCGCAAT 1380 AGAGTAGGCC AACATGGAAT TAGTTTTCGC CTTCAAGTCT TCAAGACAAC ATCAATGGGT 1440 TGGGGAGTAC GAAGCCTTGA TTTTATACCT ACGGGACATT TTGTGTGTGA ATATATAGGG 1500 GAGTTGTTGG ATAATGAAGA TGCTCAGGAG AGGGATAATG ATGAGTACTT GTTCCTTATT 1560 GGAAACAACT ATTATGATGT ATCCCGCTGG GACAACTTAC AAAAGACTAT CCCCTCACTT 1620 ATGAATGGCC CTGGGGAAGA GGAAGAAAAT TTCTTTGCAG TGGACGCACT GAAATGTGGC 1680 AACCTTGCAA GGTTCATCAA CCATAGCTGC ACCCCTAACC TTTTCACACA AAATGTTCTC 1740 TATGACCATG ACAACAAGGG TATGCCTCAC ATCATGCTCT TTGCTTGTGA GGATATTCAG 1800 CCTCTTGAAC CACTATCATA TGACTATAAT TATACCATAG ATGGGGTCCA TGACTCTGAA 1860 GGTAACATCA AGAAGAAACG ATGCTTATGT GGCTCTGTTG AGTGCACTGG ATGGTTGTAC 1920 TAG
1924Nucleotide Fasta Sequence
>TRAES3BF156000040CFD_t1|JHDM2|Triticum aestivum ATGGCGACCTCAAAGGTCCACAACGTAGATGAGGTACTCAATGGCCATGGAGGCACCGTGGAGCCAAGTGTGGCCGCCAAACCTAGCACCCAGCAGGCCTCTCAGTGCAACGGCGCTACGTGGGAGAACAGTTCGATGATGACGAGATTAGGTACGGGTGGTTGCCGCAAGGGGCGCAAGGCCGTATTGCCATGGAGATTTCAGATTGGGTACAAGCGGCCACGGTCACAGGGTTTAAGCCAGGACGGCGGATCCGATGGACTTCCTGCAACTGGAACTTCCATGTCCACTGATGGTACTGGAGCTTCCAAGTCCATGGATGGTTCCAGGCATATAGGAGTTGCTGCTGCTGCTTCTGTACCCAACAAAACGAAGGTTGACAATGGTGATCGTCATCGTCCAATGCCAAAGAACAGAGTCGCCATCAGCAGAGAAAGCCTCATGGCTTCTTTGCAGGAATTCCGGCTAATTTACAGGCAGCTTGTGGCCCAAGAAAAGGCCGACTGCGGTAAACAAGAACATGATCTTGCAGCCTTTCAAGTCTTCAGGGAGAGGCTATGTGTTGAATTTGATGATAGGAGGTACTTGGGTAGCGTTCCTGGAGTTCATGTTGGTGACGTGTTTGATTCGGACGCCGAGCTTTTCCTTGTTGGTCTCCATCGTTCACAGCAGTCGCGTGTTGATTACATCAATCAGAACGGGGGCAGGACATGTCTAGCCGTTAGCATCGTGTCGTACGCGCAACAGTCTGCCCAAAATAACAATCTGGATTTCTTGCTACATGTTGGGTCTGTGGCTGCCACCACTGGCCAGAACATGGAAGGTACCGACTTGGCGCTAAAGCAGAGTATGGATACCAAAACACATGTGCGTGTCATTTATAGGTTTGTTATGACCGGCCGTGAGGAGCTTACATACTATGTTTATGGTGGTTTATATTTGGTCGAGAAATTTAGCAAAGAGAAACTGAGGGAAGACAAACATATTAGCACTTTTCATCTGAGAAGATTGTCGGGGCAACCGAGCATCAACATTCACGAACTTGTGGAAAAAAGAATGGCTGAACCATCCAATGGAACTTTTACTGTAGATATATCGTCAGGTCTTGAGAAGATCCCTATATCTGCAATCAACTCCATATCAAACGAGGCCCCGGCTCCATTTCGCTACATTTCACACATACAATACCTCAGGAAGTATCAGCTAGATCCTCCATCAGGTTGTGATTGTGTTGGTCGATGTTCGGACTCGCAAAAGTGTGCATGTGTAATGAAAAATGGTGGGAAGATCCCTTTCAGAAAGACCGGTGGTCTCCTAGAGGAAAAACCTCTTATTTACGAGTGTGGACCTTCATGCAAGTGCCCTCCAACTTGTCGCAATAGAGTAGGCCAACATGGAATTAGTTTTCGCCTTCAAGTCTTCAAGACAACATCAATGGGTTGGGGAGTACGAAGCCTTGATTTTATACCTACGGGACATTTTGTGTGTGAATATATAGGGGAGTTGTTGGATAATGAAGATGCTCAGGAGAGGGATAATGATGAGTACTTGTTCCTTATTGGAAACAACTATTATGATGTATCCCGCTGGGACAACTTACAAAAGACTATCCCCTCACTTATGAATGGCCCTGGGGAAGAGGAAGAAAATTTCTTTGCAGTGGACGCACTGAAATGTGGCAACCTTGCAAGGTTCATCAACCATAGCTGCACCCCTAACCTTTTCACACAAAATGTTCTCTATGACCATGACAACAAGGGTATGCCTCACATCATGCTCTTTGCTTGTGAGGATATTCAGCCTCTTGAACCACTATCATATGACTATAATTATACCATAGATGGGGTCCATGACTCTGAAGGTAACATCAAGAAGAAACGATGCTTATGTGGCTCTGTTGAGTGCACTGGATGGTTGTACTAG
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |