WERAM Information

Tag Content
WERAM ID WERAM-Tra-0346
Ensembl Protein ID TRAES3BF072500110CFD_t1
Gene Name TRAES_3BF072500110CFD_c1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
TRAES3BF072500110CFD_g TRAES3BF072500110CFD_t1 TRAES3BF072500110CFD_t1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 5.20e-13 51.2 642 1996
Organism Triticum aestivum
Domain Profile
  Me_Reader PHD
                PHD.txt   4 ClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                            C++C    +g+  +v+Cd+C+ ++H +C++l++  lp+g  w+Cp+C+
  Traes_4AL_3464D151A.2 642 CRIC--GMDGT--LVCCDGCPWAYHSRCIGLNKAFLPQG-LWFCPECV 684
                            999*..33332..9*************************.*******7 PP
                PHD.txt    3 iClvCgkddegekemvqCdeCddwfHlkCvklp..lsslpeg....kswyCpsCk 51  
                              C  C+kd +  + ++ C+ C+   H +C+  +       +g    +s +C+ C 
  Traes_4AL_3464D151A.2 1436 PCSSCKKDVAF-RDVIRCSDCQGYCHKECTVKSvgG----KGgtaaSSLICKLCL 1485
                             5999*544333.349**************8766331....223444578888886 PP
                PHD.txt    3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52  
                             +C++C+k++  +   v C++C+ wfH++ + l+++++ e  +++C +C++
  Traes_4AL_3464D151A.2 1655 TCCLCKKSYCPDFLYVRCEQCKAWFHGDALRLEEERILEVVQYRCCKCRR 1704
                             4555*888888777*******************99999999*******96 PP
                PHD.txt    4 ClvCgkddegekemvqCdeCddwfHlkCvklplsslp.egkswyCpsCke 52  
                             C  C++++      ++C  C   +H +C +  +s  p e+++w+C  C+e
  Traes_4AL_3464D151A.2 1949 CKKCNNSQPPP--DLKCLVCGLRIHRQCSPWDESDPPvESADWVCGACRE 1996
                             88886666554..5******************8888888889******96 PP
Protein Sequence
(Fasta)		MRRPPAKGAT GGSSGDGRAT NGAGRMGVRR PSRGVVSVGR WKGGGGGRAG VGRRGERSCG 60
RALLEVIFLV QGQGPYSGVS DGRILKWNGE KLGWTTYAYG PGYDSKTCTL SKFSPETENA 120
RESRCGRPLG LRFNQNSGDL YVADAYKGLM RVAPGGGEAT VLVNQVDGFP LCFTNGVDVD 180
QVTGQVYFTD SSMNYQKSQH EMVTRTGDST GRLMSYNPRT SDVTVLQAGM TYPNGVALSA 240
DRSHLVVAST GPCKLLRHWI EGVNAGTSEP FADLPGYPDN VRPDTKGGYW VALHREKNEL 300
PLVVIVIVSL SGSVTMGR 318
Nucleotide Sequence
(Fasta)		ATGCGGCGAC CCCCGGCGAA GGGCGCGACG GGCGGCTCCA GCGGCGATGG CAGGGCGACG 60
AACGGCGCGG GGAGGATGGG CGTACGGAGG CCCTCCCGTG GTGTGGTGTC CGTTGGGAGG 120
TGGAAGGGGG GTGGGGGAGG TCGTGCGGGT GTTGGGAGGA GAGGGGAGAG GTCGTGCGGG 180
CGGGCGTTGT TGGAAGTGAT TTTTTTGGTG CAGGGCCAGG GCCCCTACAG CGGTGTCTCG 240
GACGGCCGGA TCCTCAAGTG GAACGGCGAA AAGCTAGGAT GGACTACCTA TGCATATGGA 300
CCCGGGTATG ATAGCAAGAC ATGCACGCTG TCCAAGTTCA GCCCGGAGAC TGAGAATGCC 360
AGGGAGAGCC GCTGCGGCCG CCCTCTCGGC CTACGGTTCA ACCAGAATTC GGGCGACCTC 420
TACGTGGCCG ACGCGTACAA GGGACTGATG CGGGTAGCGC CGGGCGGCGG CGAGGCCACC 480
GTGTTGGTCA ACCAGGTTGA CGGCTTTCCT CTGTGCTTCA CCAACGGTGT TGACGTCGAT 540
CAAGTTACGG GTCAGGTCTA CTTCACTGAT AGCTCGATGA ACTATCAAAA GTCACAGCAT 600
GAGATGGTGA CTCGCACTGG GGACTCGACG GGCCGCCTCA TGAGCTACAA CCCACGGACA 660
TCCGATGTCA CGGTGCTCCA GGCGGGCATG ACGTACCCCA ACGGCGTCGC GCTCAGCGCC 720
GACAGGTCCC ACCTCGTGGT CGCATCTACC GGACCATGCA AGTTGCTGAG GCATTGGATC 780
GAAGGGGTCA ACGCAGGCAC ATCCGAGCCT TTTGCCGACC TGCCCGGATA TCCAGATAAC 840
GTGAGGCCCG ACACCAAAGG AGGCTATTGG GTGGCGTTGC ATCGCGAGAA GAATGAGTTG 900
CCTTTGGTCG TGATAGTCAT CGTCTCGCTG TCAGGGTCGG TAACGATGGG AAGATAG 958
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Aet-0065 EMT00978 Aegilops tauschii 94 9e-130 460
WERAM-Ors-0070 OS07T0543600-00 Oryza sativa 71 1e-97 353
WERAM-Ori-0087 BGIOSGA025896-PA Oryza indica 71 3e-97 352
WERAM-Orm-0074 OMERI07G14570.1 Oryza meridionalis 71 4e-97 352
WERAM-Orl-0109 KN542308.1_FGP001 Oryza longistaminata 71 4e-97 351
WERAM-Orni-0077 ONIVA07G16000.1 Oryza nivara 71 2e-96 349
WERAM-Orp-0075 OPUNC07G16480.1 Oryza punctata 71 4e-96 348
WERAM-Orgl-0075 OGLUM07G17310.1 Oryza glumaepatula 70 4e-96 348
WERAM-Lep-0078 LPERR07G15140.1 Leersia perrieri 69 3e-93 338
WERAM-Tru-0092 TRIUR3_32970-P1 Triticum urartu 92 1e-92 337
WERAM-Orb-0078 OBART07G17700.1 Oryza barthii 70 2e-90 329
WERAM-Mua-0053 GSMUA_Achr3P06240_001 Musa acuminata 52 6e-62 234
WERAM-Orr-0080 ORUFI07G18380.1 Oryza rufipogon 79 1e-60 230
WERAM-Sot-0051 PGSC0003DMT400044684 Solanum tuberosum 48 2e-53 206
Created Date 25-Jun-2016