WERAM Information

Tag Content
WERAM ID WERAM-Sol-0139
Ensembl Protein ID Solyc11g069160.1.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Solyc11g069160.1 Solyc11g069160.1.1 Solyc11g069160.1.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.90e-08 35.1 118 412
Organism Solanum lycopersicum
Domain Profile
  Me_Reader PHD
             PHD.txt   3 iClvCgkddegekemvqCde..CddwfHlkCvklplsslpeg.......kswyCpsCk 51 
                          C+ C +++ ++++m+qC+   C++w H++Cv +p+++++ g       + +yC+ C+
  Solyc11g069160.1.1 118 RCV-C-TSSLQTETMIQCEDrrCHTWQHIRCVVIPEKPME-GgdppippTTFYCEVCR 172
                         598.*.55555556*****99**************44444.4589999889******7 PP
             PHD.txt  27 fHlkCvklp..lsslpegkswyCpsCk 51 
                         +H+ C +l    +  + +++w Cp C 
  Solyc11g069160.1.1 386 IHMGCFDLDvfVEMNQRSRKWQCPICL 412
                         699****9975444444469******6 PP
Protein Sequence
(Fasta)		MDLVASCKDK LAYFRIKELK DVLNQLGLSK QGKKQDLVDR ILATLSDERA SGLFPKRNSV 60
GKEDVAKLVD DIYRKMQVSG ATGATGATDL ASKSQVVSDT SNVKLKEEIE DTYHMKIRCV 120
CTSSLQTETM IQCEDRRCHT WQHIRCVVIP EKPMEGGDPP IPPTTFYCEV CRLVRADPFW 180
VTMGHPLYPA KLAITSVPAD GTNPVQSIEK TFQITRADRD LLAKQEYDLQ AWCMLLNDKV 240
QFRMQWPQYA DLQVNGVPVR AINRPGSQLL GANGRDDGPI ITPCTRDGIN KVTLTGCDAR 300
VFCLGVRLVK RRTVQQVLSM IPKVSDGEKF EDALARVRRC VGGGTATENA DSDSDLEVVA 360
DCIPVNLRCP MSGSRMKIAG RFKPCIHMGC FDLDVFVEMN QRSRKWQCPI CLKNYSLEHV 420
IIDPYFNRIT SQMRSCGEDV TEIEVKPDGS WRAKTESDRR SLGDLGRWHL PDGSLSESPD 480
IESKPKPEIL KQVKQEGGSD GNGLKVGLKK NRDGLWEISK PEDQTFSSGN RLRENFGQDV 540
IPMSSSATGS GKEGEDRSVN QDGNGNLEFS NNAFDLEAIS LNIDPPYGFG NGNPSIPAGD 600
AEVIVLSDSD EENEPIIPSG AVFNNNHSDA PVVSFPAQPL GIPDSFHDSA LVNGGNSCLG 660
LFNSNDDEFG MNLWSLPSGT QGGPGFQLFS SDADVSGSLV DVQHESINCT SSMSGYGLGA 720
ESGIGSASLL PETYTDRPNA DINDSLVDNP LGFSGNDPSL QIFLPTRPSI TSVEAARDQP 780
DVSNGVGTED WISLRLGGDG GVPGDTAVAN GLSSGQQVQT KDTALDSLAD TASLLIGMND 840
SRSTKSSRER SDSPFTFPRQ RRSVRPRLYL SIDSDSE 877
Nucleotide Sequence
(Fasta)		ATGGATTTGG TTGCTAGCTG CAAGGATAAA TTGGCATATT TTCGGATAAA GGAGCTCAAA 60
GATGTTCTGA ATCAGCTTGG TCTTTCAAAG CAGGGGAAGA AGCAGGACCT TGTTGATCGC 120
ATATTAGCTA CACTCTCTGA TGAACGAGCT TCAGGATTGT TCCCAAAGAG AAACAGTGTT 180
GGGAAGGAAG ACGTTGCAAA ACTTGTTGAT GACATTTACA GAAAAATGCA GGTGTCTGGG 240
GCGACGGGGG CAACTGGGGC AACTGACCTA GCATCAAAGT CGCAAGTTGT CTCCGATACC 300
AGTAATGTGA AGTTGAAGGA GGAGATTGAA GACACTTACC ACATGAAAAT TCGCTGTGTG 360
TGTACAAGCT CATTACAAAC TGAAACAATG ATTCAGTGTG AAGACAGAAG ATGTCACACA 420
TGGCAACATA TTCGTTGTGT TGTCATACCA GAGAAGCCAA TGGAGGGTGG TGATCCACCA 480
ATTCCGCCTA CTACTTTTTA CTGTGAAGTG TGCAGACTGG TTCGTGCTGA CCCCTTCTGG 540
GTGACAATGG GACACCCTTT GTATCCTGCA AAGTTGGCTA TTACAAGCGT TCCTGCCGAT 600
GGGACGAACC CTGTGCAGAG TATCGAGAAA ACATTTCAGA TCACTAGAGC TGACAGAGAC 660
TTGTTGGCGA AACAGGAATA TGATCTCCAG GCTTGGTGCA TGCTTCTCAA CGACAAGGTA 720
CAATTTAGAA TGCAGTGGCC TCAATATGCA GATTTGCAGG TGAATGGGGT TCCAGTGCGC 780
GCGATAAATA GACCTGGCTC TCAATTGCTG GGTGCTAATG GTCGAGATGA TGGCCCTATA 840
ATCACACCAT GCACCAGAGA TGGAATCAAC AAGGTCACAT TAACAGGATG TGATGCTCGT 900
GTCTTTTGCT TGGGGGTCAG ACTTGTGAAG CGGCGAACTG TTCAGCAGGT TCTTAGTATG 960
ATACCGAAGG TGTCAGATGG TGAGAAATTT GAAGATGCCC TTGCTCGCGT TCGTCGCTGT 1020
GTTGGTGGTG GGACAGCCAC GGAAAATGCT GATAGTGATA GTGATCTGGA AGTTGTTGCT 1080
GATTGTATTC CTGTCAATCT TCGCTGCCCT ATGAGTGGTT CAAGGATGAA AATTGCTGGA 1140
AGATTCAAAC CTTGTATACA CATGGGCTGC TTTGATCTTG ACGTCTTTGT TGAAATGAAT 1200
CAAAGGTCGA GGAAGTGGCA ATGCCCTATC TGTCTTAAGA ACTACTCTTT GGAGCATGTT 1260
ATCATAGATC CATATTTCAA TCGAATTACT TCTCAGATGC GTAGTTGTGG AGAAGATGTC 1320
ACAGAAATCG AAGTGAAACC TGATGGTTCT TGGCGCGCGA AGACAGAATC TGATCGAAGG 1380
AGTCTTGGAG ATCTTGGACG TTGGCATTTA CCTGATGGGT CTCTGAGTGA ATCTCCAGAT 1440
ATAGAGTCGA AGCCTAAGCC TGAAATTCTT AAGCAGGTTA AACAGGAAGG AGGCTCTGAT 1500
GGAAATGGCC TTAAAGTTGG ATTGAAGAAG AACAGGGACG GATTGTGGGA AATCAGCAAA 1560
CCTGAAGACC AGACATTTTC ATCTGGAAAT AGATTGAGAG AAAATTTTGG TCAGGATGTC 1620
ATTCCAATGA GCAGCAGTGC CACTGGAAGT GGCAAAGAAG GTGAAGATCG CAGTGTTAAT 1680
CAGGATGGTA ATGGGAACCT TGAATTCTCG AACAATGCAT TTGATCTTGA GGCCATCTCT 1740
CTTAATATTG ACCCACCATA TGGTTTTGGC AACGGAAATC CGTCAATACC AGCAGGAGAT 1800
GCTGAAGTTA TTGTACTAAG TGATTCTGAT GAAGAGAATG AGCCAATTAT CCCATCTGGA 1860
GCTGTCTTTA ATAACAACCA TAGTGATGCA CCTGTAGTTT CTTTTCCAGC TCAACCACTA 1920
GGAATTCCGG ATTCTTTTCA TGATTCTGCG CTTGTTAACG GTGGGAATTC ATGCCTGGGG 1980
CTGTTCAATT CTAATGACGA TGAATTTGGG ATGAACTTGT GGTCTTTGCC TTCTGGAACC 2040
CAAGGTGGCC CTGGTTTTCA GTTATTTAGT TCTGATGCTG ATGTTTCAGG ATCTTTAGTA 2100
GATGTGCAAC ATGAATCTAT TAACTGTACC AGTTCTATGA GTGGGTACGG GTTGGGTGCA 2160
GAGAGTGGCA TTGGATCTGC TTCTCTTCTT CCTGAAACAT ACACCGATCG CCCTAATGCT 2220
GATATAAATG ATAGTTTAGT TGATAATCCC CTTGGATTTA GTGGCAATGA TCCCTCACTT 2280
CAAATATTTC TTCCTACTAG ACCATCAATT ACGTCAGTCG AGGCTGCGAG GGATCAGCCT 2340
GATGTTTCAA ATGGCGTTGG TACTGAGGAT TGGATCTCAC TTAGGCTTGG TGGTGATGGA 2400
GGGGTTCCTG GTGATACTGC AGTTGCAAAT GGGTTAAGCT CTGGGCAGCA AGTACAAACT 2460
AAAGACACTG CGTTGGACTC ATTGGCTGAC ACTGCTTCAT TGCTTATTGG TATGAATGAC 2520
AGCAGATCAA CTAAGAGCAG TAGAGAACGA TCAGATAGTC CTTTTACATT TCCTCGTCAA 2580
CGTCGTTCTG TAAGACCAAG ATTGTATCTA AGTATTGATT CGGATTCTGA ATAG 2635
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Viv-0034 VIT_06s0004g03180.t01 Vitis vinifera 68 0.0 1176
WERAM-Met-0101 AES88651 Medicago truncatula 65 0.0 1104
WERAM-Art-0145 AT5G60410.1 Arabidopsis thaliana 63 0.0 1074
WERAM-Arl-0112 fgenesh2_kg.8__ 2005__ AT5G60410.5 Arabidopsis lyrata 63 0.0 1074
WERAM-Glm-0141 GLYMA12G07590.1 Glycine max 65 0.0 1068
WERAM-Brr-0105 Bra020249.1-P Brassica rapa 59 0.0 979
WERAM-Mua-0008 GSMUA_Achr10P13170_001 Musa acuminata 54 0.0 870
WERAM-Org-0050 ORGLA05G0017700.1 Oryza glaberrima 52 0.0 841
WERAM-Orp-0048 OPUNC05G02000.1 Oryza punctata 51 0.0 829
WERAM-Orr-0050 ORUFI05G01890.1 Oryza rufipogon 51 0.0 822
WERAM-Orni-0108 ONIVA10G12200.1 Oryza nivara 51 0.0 821
WERAM-Orl-0083 KN539825.1_FGP005 Oryza longistaminata 53 0.0 817
WERAM-Orb-0050 OBART05G01770.1 Oryza barthii 51 0.0 810
WERAM-Tra-0135 Traes_4AL_96A137452.1 Triticum aestivum 49 0.0 641
WERAM-Aet-0041 EMT28925 Aegilops tauschii 49 1e-179 627
WERAM-Tru-0081 TRIUR3_29937-P1 Triticum urartu 46 1e-179 627
WERAM-Hov-0075 MLOC_60545.2 Hordeum vulgare 48 2e-179 627
WERAM-Php-0135 PP1S94_39V6.1 Physcomitrella patens 46 3e-151 533
WERAM-Sem-0107 EFJ20543 Selaginella moellendorffii 47 6e-150 529
WERAM-Orgl-0049 OGLUM05G01840.1 Oryza glumaepatula 47 2e-132 471
WERAM-Zem-0086 GRMZM2G155123_P01 Zea mays 62 2e-115 414
WERAM-Sot-0100 PGSC0003DMT400088246 Solanum tuberosum 52 2e-95 348
WERAM-Brd-0102 BRADI4G26730.1 Brachypodium distachyon 45 8e-21 100
Created Date 25-Jun-2016