Tag |
Content |
WERAM ID |
WERAM-Sol-0132 |
Ensembl Protein ID |
Solyc11g005730.1.1 |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HMT |
SET1 |
2.20e-27 |
96.2 |
130 |
376 |
Me_Reader |
PHD |
1.00e-07 |
32.7 |
74 |
122 |
|
Organism |
Solanum lycopersicum |
Domain Profile |
HMT SET1
SET1.txt 46 eyekkeigvylfrldedaevvvdatkkgn 74 ++++k+i +fr+++++++vv + Solyc11g005730.1.1 130 SFSQKKIV-DFFRIQKESQMVVKCSSAQD 157 56666444.56777777788887665555 PP SET1.txt 2 elevakskikglglvakkeiekeelviEYvGevirsevadkrekeyekkeigvylfrldedaevvvdatkkgniarfi....nhsce.... 84 +l+v++++ +g++++a+ +i++ ++++EY+G+v +++++e++ +++++++l + d+++++v++++k+gni+rfi nhs+e Solyc11g005730.1.1 255 PLMVVFDSREGYTVEADGPIKDLTILAEYTGDV--DYIRNRQEDD--CDSMMTLLLARDPSKSLVICPDKRGNISRFInginNHSPEgkkk 341 799******************************..5556666655..78889**************************99999***99999 PP SET1.txt 85 pNceakvvavdgekkiviyakraIekgeeltydYk 119 +N+++ +++v+g ++++++ r+I+kge+l+ydY+ Solyc11g005730.1.1 342 QNLKCVRYSVKGACHVLLVTIRDIAKGERLYYDYN 376 **********************************7 PP
Me_Reader PHD
PHD.txt 2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 +C Cg + +e++ CdeC++ fH+ C+++ ++p + w+Cp+C + Solyc11g005730.1.1 74 VVCEQCGSGERP-DELLLCDECNKGFHMLCLSPIVVRVPMK-LWHCPHCSA 122 579999555554.45*******************9999998.9******85 PP
|
Protein Sequence (Fasta) | MAPSSSASPV AGLSRPVAQR KVHPSADYRR RPRMSVSPPP KKFRSMVEIM KVATRVELPE 60 ESEESEEEDD YEEVVCEQCG SGERPDELLL CDECNKGFHM LCLSPIVVRV PMKLWHCPHC 120 SADQHRVIKS FSQKKIVDFF RIQKESQMVV KCSSAQDIKK RRKRSLVFHK RRRRLSLYIP 180 TEDPHRKLVQ MASLASALTA LDMEFSDELT YMPGMARKSA NSANFESGGM QVLSKEDTET 240 LEQCRAMYKR GECPPLMVVF DSREGYTVEA DGPIKDLTIL AEYTGDVDYI RNRQEDDCDS 300 MMTLLLARDP SKSLVICPDK RGNISRFING INNHSPEGKK KQNLKCVRYS VKGACHVLLV 360 TIRDIAKGER LYYDYNGYEH EYPTHHFV 388Protein Fasta Sequence
>Solyc11g005730.1.1|PHD|Solanum lycopersicum MAPSSSASPVAGLSRPVAQRKVHPSADYRRRPRMSVSPPPKKFRSMVEIMKVATRVELPEESEESEEEDDYEEVVCEQCGSGERPDELLLCDECNKGFHMLCLSPIVVRVPMKLWHCPHCSADQHRVIKSFSQKKIVDFFRIQKESQMVVKCSSAQDIKKRRKRSLVFHKRRRRLSLYIPTEDPHRKLVQMASLASALTALDMEFSDELTYMPGMARKSANSANFESGGMQVLSKEDTETLEQCRAMYKRGECPPLMVVFDSREGYTVEADGPIKDLTILAEYTGDVDYIRNRQEDDCDSMMTLLLARDPSKSLVICPDKRGNISRFINGINNHSPEGKKKQNLKCVRYSVKGACHVLLVTIRDIAKGERLYYDYNGYEHEYPTHHFV
|
Nucleotide Sequence (Fasta) | ATGGCTCCAT CAAGCTCTGC TTCGCCAGTG GCGGGTTTAT CGAGACCGGT AGCTCAACGG 60 AAGGTTCATC CATCAGCTGA CTACCGTCGT CGACCGCGGA TGTCAGTATC GCCGCCGCCG 120 AAGAAATTCA GGTCGATGGT GGAGATCATG AAAGTAGCGA CGCGTGTCGA GTTACCGGAG 180 GAATCAGAGG AATCGGAGGA AGAAGATGAT TATGAAGAAG TTGTATGTGA ACAATGTGGC 240 TCTGGAGAAA GGCCAGATGA GTTGTTACTG TGTGATGAAT GTAACAAAGG GTTTCATATG 300 TTATGCCTTA GTCCTATTGT AGTTCGTGTT CCCATGAAAC TATGGCATTG TCCTCATTGC 360 TCTGCTGATC AACATCGCGT AATCAAAAGT TTTTCGCAAA AGAAGATAGT TGATTTCTTT 420 CGGATTCAGA AAGAGAGTCA AATGGTGGTG AAATGTTCAT CTGCTCAAGA TATCAAAAAA 480 CGTCGGAAGC GTTCACTAGT TTTCCACAAG AGACGCAGAA GGCTATCACT ATATATTCCA 540 ACAGAAGATC CTCACAGGAA GCTAGTTCAA ATGGCATCTC TTGCTTCTGC ACTGACAGCT 600 CTCGATATGG AATTCAGCGA TGAGCTAACT TACATGCCTG GCATGGCTCG TAAATCTGCT 660 AACAGTGCCA ACTTTGAAAG TGGTGGAATG CAGGTTCTCT CAAAAGAAGA CACTGAAACC 720 CTGGAGCAGT GTAGAGCTAT GTATAAAAGA GGGGAATGCC CTCCTCTGAT GGTAGTTTTT 780 GATTCTCGTG AAGGCTATAC TGTAGAAGCT GATGGGCCTA TAAAGGACTT GACAATATTA 840 GCAGAATATA CAGGCGATGT GGATTATATC AGGAATCGGC AGGAGGATGA TTGTGATAGC 900 ATGATGACCC TTCTTTTAGC AAGAGATCCA TCAAAAAGTC TTGTTATCTG CCCTGATAAG 960 CGAGGAAACA TTTCTCGGTT TATCAATGGC ATAAATAACC ATTCACCGGA GGGTAAGAAG 1020 AAGCAGAACC TGAAATGTGT GAGATACAGT GTAAAGGGCG CATGTCATGT TCTTCTGGTT 1080 ACAATTCGTG ATATCGCCAA GGGAGAGCGG CTGTACTATG ATTACAATGG ATACGAGCAT 1140 GAATATCCAA CACATCATTT TGTTTAA
1168Nucleotide Fasta Sequence
>Solyc11g005730.1.1|PHD|Solanum lycopersicum ATGGCTCCATCAAGCTCTGCTTCGCCAGTGGCGGGTTTATCGAGACCGGTAGCTCAACGGAAGGTTCATCCATCAGCTGACTACCGTCGTCGACCGCGGATGTCAGTATCGCCGCCGCCGAAGAAATTCAGGTCGATGGTGGAGATCATGAAAGTAGCGACGCGTGTCGAGTTACCGGAGGAATCAGAGGAATCGGAGGAAGAAGATGATTATGAAGAAGTTGTATGTGAACAATGTGGCTCTGGAGAAAGGCCAGATGAGTTGTTACTGTGTGATGAATGTAACAAAGGGTTTCATATGTTATGCCTTAGTCCTATTGTAGTTCGTGTTCCCATGAAACTATGGCATTGTCCTCATTGCTCTGCTGATCAACATCGCGTAATCAAAAGTTTTTCGCAAAAGAAGATAGTTGATTTCTTTCGGATTCAGAAAGAGAGTCAAATGGTGGTGAAATGTTCATCTGCTCAAGATATCAAAAAACGTCGGAAGCGTTCACTAGTTTTCCACAAGAGACGCAGAAGGCTATCACTATATATTCCAACAGAAGATCCTCACAGGAAGCTAGTTCAAATGGCATCTCTTGCTTCTGCACTGACAGCTCTCGATATGGAATTCAGCGATGAGCTAACTTACATGCCTGGCATGGCTCGTAAATCTGCTAACAGTGCCAACTTTGAAAGTGGTGGAATGCAGGTTCTCTCAAAAGAAGACACTGAAACCCTGGAGCAGTGTAGAGCTATGTATAAAAGAGGGGAATGCCCTCCTCTGATGGTAGTTTTTGATTCTCGTGAAGGCTATACTGTAGAAGCTGATGGGCCTATAAAGGACTTGACAATATTAGCAGAATATACAGGCGATGTGGATTATATCAGGAATCGGCAGGAGGATGATTGTGATAGCATGATGACCCTTCTTTTAGCAAGAGATCCATCAAAAAGTCTTGTTATCTGCCCTGATAAGCGAGGAAACATTTCTCGGTTTATCAATGGCATAAATAACCATTCACCGGAGGGTAAGAAGAAGCAGAACCTGAAATGTGTGAGATACAGTGTAAAGGGCGCATGTCATGTTCTTCTGGTTACAATTCGTGATATCGCCAAGGGAGAGCGGCTGTACTATGATTACAATGGATACGAGCATGAATATCCAACACATCATTTTGTTTAA
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |