WERAM Information

Tag Content
WERAM ID WERAM-Sob-0114
Ensembl Protein ID Sb08g004900.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb08g004900 Sb08g004900.1 Sb08g004900.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC SIR2 1.40e-68 231.9 121 401
Organism Sorghum bicolor
Domain Profile
  HDAC SIR2
       SIR2.txt   3 lakllkkskkivvltGAGiStsaGIPDFRsseGlysklkkeelpspeaifdldffrkdpkv..fyalakelyp.lgsakPtktHyflaelekkgkl 95 
                    l++++ ksk+++v+tGAG+St++GIPD+Rs++G ys+        ++++++++f+r+ +++  ++a++++ ++ + +a+P+++Hy+la+le+ g++
  Sb08g004900.1 121 LYQFIDKSKRLMVVTGAGMSTESGIPDYRSPNGAYST-------GFKPLTHQEFVRSIQARrrYWARSYAGWRrFRRAQPNAAHYALASLERIGRV 209
                    678999******************************9.......5888999999999877778********************************* PP
       SIR2.txt  96 lrlytQNiDgLerkaglkedklvelHGslatasCtkCkkefpreeikeklkak..........................................e 149
                    + ++tQN+D+L+++ag++    +elHGs++ + C++C+++++re ++e++k+                                           +
  Sb08g004900.1 210 HSMVTQNVDRLHHRAGSN---PLELHGSVYDVICLECGTSISRESFQEEVKNLnpkwaqaidslevgqpgsdksfgmqqrpdgdveidekfweqdF 302
                    *****************6...9******************************9******************************************9 PP
       SIR2.txt 150 kvpkCekCkgvlkpdivffgenlpeefleeveedlkeadlllvlGtSlkvepvaslvkkavkkkvpvllvnleevkadkladlkllgdcdevveel 245
                    ++p+C++C+gvlkpd+v+fg+n+p+e++e+++e+++++d+llv+G++l+ +++++l++ a+++++p++ v+++e++ad++ +lk++++c+e++ ++
  Sb08g004900.1 303 EIPSCHQCGGVLKPDVVMFGDNVPQERAESAKEAARTCDALLVVGSALMTMSAFRLARLAHEAHAPIAAVSIGETRADSILSLKINARCGEILPRI 398
                    9*********************************************************************************************99 PP
       SIR2.txt 246 lkl 248
                    l+ 
  Sb08g004900.1 399 LQM 401
                    875 PP
Protein Sequence
(Fasta)		MAAAPAAHAY RASASVEAFM QPTYTCNGTQ IIAGLTGALW AASRRSYAHF CNFQASGNNA 60
LLYGRENPLS LRYSFRFLKA RNNHSSAVAP KDYCETYIQF LRDKRIVPDS DPPSSKDVDL 120
LYQFIDKSKR LMVVTGAGMS TESGIPDYRS PNGAYSTGFK PLTHQEFVRS IQARRRYWAR 180
SYAGWRRFRR AQPNAAHYAL ASLERIGRVH SMVTQNVDRL HHRAGSNPLE LHGSVYDVIC 240
LECGTSISRE SFQEEVKNLN PKWAQAIDSL EVGQPGSDKS FGMQQRPDGD VEIDEKFWEQ 300
DFEIPSCHQC GGVLKPDVVM FGDNVPQERA ESAKEAARTC DALLVVGSAL MTMSAFRLAR 360
LAHEAHAPIA AVSIGETRAD SILSLKINAR CGEILPRILQ MGSLVVPNIS
Nucleotide Sequence
(Fasta)		ATGGCGGCTG CCCCTGCCGC GCACGCCTAC CGCGCTTCGG CTTCGGTTGA GGCTTTTATG 60
CAACCGACTT ACACATGTAA TGGGACTCAG ATAATTGCAG GCCTAACTGG TGCTCTGTGG 120
GCGGCGTCTA GAAGGTCATA TGCTCATTTC TGCAACTTCC AAGCATCAGG AAACAATGCG 180
CTTCTTTATG GAAGGGAAAA TCCTCTCTCC TTGAGATACT CTTTTCGCTT TTTGAAAGCA 240
AGAAACAACC ATTCATCAGC CGTTGCGCCT AAGGACTATT GTGAAACCTA CATCCAGTTT 300
TTGAGAGATA AACGGATAGT TCCTGATTCA GACCCCCCAA GCTCTAAAGA CGTGGACCTA 360
TTATATCAAT TTATTGATAA GAGTAAAAGG CTCATGGTAG TAACTGGAGC AGGAATGAGC 420
ACTGAATCTG GGATTCCTGA TTACAGGAGT CCTAATGGTG CATACAGCAC GGGTTTTAAA 480
CCACTTACTC ATCAGGAGTT TGTTCGCTCT ATTCAAGCCC GGAGGCGGTA CTGGGCTAGG 540
AGCTATGCTG GATGGAGAAG GTTTAGGAGA GCACAACCAA ATGCAGCCCA TTATGCTCTT 600
GCGTCTCTAG AAAGGATTGG TCGTGTTCAC TCAATGGTTA CCCAAAATGT GGATAGGTTG 660
CATCATCGTG CTGGGAGTAA TCCACTTGAG CTGCATGGGA GTGTATATGA TGTTATTTGT 720
TTAGAATGTG GTACATCCAT CAGCCGGGAA TCATTCCAGG AGGAAGTGAA GAACCTAAAC 780
CCAAAGTGGG CTCAAGCTAT CGATAGTTTG GAAGTAGGGC AACCAGGTTC AGACAAAAGT 840
TTTGGAATGC AGCAACGACC TGATGGTGAT GTTGAGATTG ATGAGAAGTT CTGGGAGCAA 900
GATTTTGAAA TTCCTAGCTG CCATCAATGT GGTGGAGTGC TAAAGCCTGA TGTTGTGATG 960
TTTGGTGATA ATGTTCCTCA AGAGAGAGCT GAAAGCGCTA AGGAGGCTGC AAGAACCTGC 1020
GATGCACTTC TGGTGGTTGG TTCAGCACTA ATGACAATGT CTGCTTTTCG GCTGGCAAGG 1080
CTGGCACACG AAGCACATGC TCCGATAGCT GCAGTTAGCA TCGGGGAGAC CAGGGCTGAT 1140
AGCATTTTAT CACTGAAAAT CAATGCGAGA TGTGGGGAGA TATTACCCAG AATACTTCAG 1200
ATGGGAAGTC TGGTGGTACC AAACATAAGC TGA 1234
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sei-0033 Si009965m Setaria italica 93 0.0 711
WERAM-Zem-0150 GRMZM5G807054_P01 Zea mays 89 0.0 699
WERAM-Brd-0118 BRADI4G41127.1 Brachypodium distachyon 84 0.0 665
WERAM-Orbr-0122 OB12G14620.1 Oryza brachyantha 85 0.0 661
WERAM-Ors-0107 OS12T0179800-01 Oryza sativa 86 0.0 660
WERAM-Ori-0126 BGIOSGA036526-PA Oryza indica 86 0.0 657
WERAM-Orp-0109 OPUNC12G04720.1 Oryza punctata 86 0.0 648
WERAM-Orm-0102 OMERI12G03010.1 Oryza meridionalis 87 0.0 642
WERAM-Lep-0113 LPERR12G04350.1 Leersia perrieri 85 0.0 642
WERAM-Orr-0119 ORUFI12G05460.1 Oryza rufipogon 87 0.0 641
WERAM-Tra-0230 Traes_5DL_84C49FB59.2 Triticum aestivum 82 8e-180 627
WERAM-Aet-0050 EMT19694 Aegilops tauschii 78 2e-177 619
WERAM-Orl-0007 KN538685.1_FGP039 Oryza longistaminata 90 3e-164 575
WERAM-Orni-0118 ONIVA12G04440.1 Oryza nivara 91 3e-155 545
WERAM-Orgl-0114 OGLUM12G05580.1 Oryza glumaepatula 91 3e-155 545
WERAM-Mua-0095 GSMUA_Achr6P25880_001 Musa acuminata 74 9e-136 480
WERAM-Thc-0008 EOX92647 Theobroma cacao 70 5e-130 461
WERAM-Glm-0062 GLYMA06G16260.1 Glycine max 69 2e-127 453
WERAM-Met-0074 AES72910 Medicago truncatula 71 3e-127 452
WERAM-Prp-0069 EMJ12669 Prunus persica 70 3e-127 452
WERAM-Pot-0061 POPTR_0005s06930.1 Populus trichocarpa 70 6e-127 451
WERAM-Amt-0023 ERN08785 Amborella trichopoda 70 2e-126 449
WERAM-Art-0118 AT5G09230.7 Arabidopsis thaliana 68 4e-125 445
WERAM-Viv-0046 VIT_07s0031g02510.t01 Vitis vinifera 69 1e-124 444
WERAM-Arl-0027 fgenesh1_pg.C_scaffold_6000741 Arabidopsis lyrata 68 2e-124 442
WERAM-Bro-0024 Bo2g009270.1 Brassica oleracea 68 7e-123 437
WERAM-Brr-0142 Bra028643.1-P Brassica rapa 68 5e-122 434
WERAM-Sol-0062 Solyc04g009430.2.1 Solanum lycopersicum 69 1e-120 430
WERAM-Sot-0097 PGSC0003DMT400082473 Solanum tuberosum 68 1e-119 427
WERAM-Php-0025 PP1S15_90V6.1 Physcomitrella patens 62 2e-107 386
WERAM-Sem-0074 EFJ28669 Selaginella moellendorffii 56 6e-95 345
WERAM-Chr-0008 EDP00705 Chlamydomonas reinhardtii 50 7e-72 268
WERAM-Caj-0096 ENSCJAP00000015889.2 Callithrix jacchus 48 2e-70 263
WERAM-Ict-0083 ENSSTOP00000008774.2 Ictidomys tridecemlineatus 48 5e-70 262
WERAM-Ova-0127 ENSOARP00000012850.1 Ovis aries 48 7e-70 261
WERAM-Cap-0138 ENSCPOP00000011117.2 Cavia porcellus 48 9e-70 261
WERAM-Bot-0183 ENSBTAP00000028210.3 Bos taurus 48 2e-69 260
WERAM-Caf-0113 ENSCAFP00000015057.3 Canis familiaris 48 3e-69 259
WERAM-Mup-0031 ENSMPUP00000003126.1 Mustela putorius furo 48 3e-69 259
WERAM-Pes-0110 ENSPSIP00000013404.1 Pelodiscus sinensis 47 3e-69 259
WERAM-Tag-0120 ENSTGUP00000009802.1 Taeniopygia guttata 47 5e-69 258
WERAM-Paa-0081 ENSPANP00000005490.1 Papio anubis 48 6e-69 258
WERAM-Tas-0026 ENSTSYP00000002962.1 Tarsius syrichta 48 7e-69 258
WERAM-Aim-0062 ENSAMEP00000005483.1 Ailuropoda melanoleuca 47 7e-69 258
WERAM-Chs-0026 ENSCSAP00000015768.1 Chlorocebus sabaeus 48 9e-69 258
WERAM-Xet-0032 ENSXETP00000009271.1 Xenopus tropicalis 48 9e-69 258
WERAM-Fia-0095 ENSFALP00000007922.1 Ficedula albicollis 47 9e-69 258
WERAM-Orc-0113 ENSOCUP00000009744.3 Oryctolagus cuniculus 47 1e-68 257
WERAM-Gog-0207 ENSGGOP00000025620.1 Gorilla gorilla 47 6e-68 255
WERAM-Meg-0094 ENSMGAP00000009092.2 Meleagris gallopavo 46 7e-68 255
WERAM-Sus-0071 ENSSSCP00000010568.2 Sus scrofa 47 7e-68 255
WERAM-Fec-0171 ENSFCAP00000020847.1 Felis catus 48 9e-68 254
WERAM-Otg-0098 ENSOGAP00000008496.1 Otolemur garnettii 46 2e-67 253
WERAM-Poa-0046 ENSPPYP00000005727.2 Pongo abelii 46 2e-67 253
WERAM-Pat-0044 ENSPTRP00000009383.4 Pan troglodytes 47 2e-67 253
WERAM-Hos-0046 ENSP00000202967.4 Homo sapiens 47 3e-67 253
WERAM-Loa-0028 ENSLAFP00000001879.2 Loxodonta africana 46 3e-67 253
WERAM-Mum-0098 ENSMUSP00000107697.1 Mus musculus 46 3e-67 253
WERAM-Gaga-0078 ENSGALP00000011706.4 Gallus gallus 45 4e-67 252
WERAM-Chh-0046 ENSCHOP00000005172.1 Choloepus hoffmanni 47 5e-67 252
WERAM-Eqc-0095 ENSECAP00000011260.1 Equus caballus 46 6e-67 252
WERAM-Ocp-0148 ENSOPRP00000015399.1 Ochotona princeps 47 9e-67 251
WERAM-Anp-0117 ENSAPLP00000013436.1 Anas platyrhynchos 46 2e-66 250
WERAM-Lac-0179 ENSLACP00000020887.1 Latimeria chalumnae 46 3e-66 249
WERAM-Ran-0010 ENSRNOP00000001523.4 Rattus norvegicus 45 5e-66 249
WERAM-Asm-0019 ENSAMXP00000002317.1 Astyanax mexicanus 46 7e-66 248
WERAM-Sah-0071 ENSSHAP00000008646.1 Sarcophilus harrisii 46 1e-65 248
WERAM-Pof-0223 ENSPFOP00000018246.2 Poecilia formosa 45 1e-65 247
WERAM-Xim-0194 ENSXMAP00000015621.1 Xiphophorus maculatus 45 5e-65 245
WERAM-Ora-0041 ENSOANP00000006568.2 Ornithorhynchus anatinus 45 1e-64 244
WERAM-Dar-0026 ENSDARP00000027611.6 Danio rerio 45 7e-64 241
WERAM-Nol-0169 ENSNLEP00000018942.2 Nomascus leucogenys 46 2e-63 240
WERAM-Drm-0032 FBpp0070817 Drosophila melanogaster 46 4e-63 239
WERAM-Pem-0012 ENSPMAP00000001780.1 Petromyzon marinus 45 8e-63 238
WERAM-Ptv-0014 ENSPVAP00000002101.1 Pteropus vampyrus 46 9e-63 238
WERAM-Orn-0178 ENSONIP00000018093.1 Oreochromis niloticus 44 3e-62 236
WERAM-Ect-0086 ENSETEP00000009903.1 Echinops telfairi 46 3e-62 236
WERAM-Gam-0012 ENSGMOP00000001231.1 Gadus morhua 45 3e-62 236
WERAM-Orla-0208 ENSORLP00000024753.1 Oryzias latipes 43 6e-62 235
WERAM-Cii-0061 ENSCINP00000027422.2 Ciona intestinalis 45 9e-62 234
WERAM-Tar-0187 ENSTRUP00000038866.1 Takifugu rubripes 43 3e-61 233
WERAM-Gaa-0017 ENSGACP00000001945.1 Gasterosteus aculeatus 44 5e-60 229
WERAM-Anc-0024 ENSACAP00000002561.3 Anolis carolinensis 43 1e-58 224
WERAM-Soa-0051 ENSSARP00000004940.1 Sorex araneus 44 2e-57 220
WERAM-Tub-0044 ENSTBEP00000005291.1 Tupaia belangeri 43 1e-56 217
WERAM-Tut-0072 ENSTTRP00000005343.1 Tursiops truncatus 47 1e-54 211
WERAM-Cae-0024 F46G10.3 Caenorhabditis elegans 38 2e-53 207
WERAM-Dan-0155 ENSDNOP00000033669.1 Dasypus novemcinctus 45 1e-51 201
WERAM-Ten-0147 ENSTNIP00000015282.1 Tetraodon nigroviridis 31 5e-25 112
WERAM-Ere-0059 ENSEEUP00000005136.1 Erinaceus europaeus 28 4e-23 106
WERAM-Myl-0161 ENSMLUP00000013308.2 Myotis lucifugus 27 4e-22 103
WERAM-Org-0043 ORGLA04G0042700.1 Oryza glaberrima 28 4e-22 103
WERAM-Dio-0050 ENSDORP00000004937.1 Dipodomys ordii 28 1e-21 102
WERAM-Mam-0069 ENSMMUP00000011380.2 Macaca mulatta 29 1e-20 98.2
WERAM-Cis-0075 ENSCSAVP00000016120.1 Ciona savignyi 28 7e-20 95.9
WERAM-Asfu-0001 CADAFUAP00000229 Aspergillus fumigatus 29 2e-18 91.3
WERAM-Mod-0008 ENSMODP00000000983.1 Monodelphis domestica 25 4e-17 86.7
WERAM-Leo-0013 ENSLOCP00000002849.1 Lepisosteus oculatus 28 4e-17 86.7
WERAM-Scs-0014 EDN99996 Sclerotinia sclerotiorum 29 4e-17 86.7
WERAM-Ast-0001 CADATEAP00000292 Aspergillus terreus 27 6e-17 85.9
WERAM-Trr-0005 EGR51157 Trichoderma reesei 29 8e-17 85.5
WERAM-Gag-0013 GGTG_03219T0 Gaeumannomyces graminis 28 1e-16 85.5
WERAM-Trv-0037 EHK18208 Trichoderma virens 29 2e-16 84.3
WERAM-Fuo-0022 FOXG_06210P0 Fusarium oxysporum 29 2e-16 84.3
WERAM-Cag-0021 CAG61249 Candida glabrata 25 2e-16 84.0
WERAM-Scj-0035 EEB09012 Schizosaccharomyces japonicus 27 4e-16 83.2
WERAM-Chg-0039 EAQ84978 Chaetomium globosum 32 5e-16 82.8
Created Date 25-Jun-2016