WERAM Information

Tag Content
WERAM ID WERAM-Sob-0061
Ensembl Protein ID Sb03g046950.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb03g046950 Sb03g046950.1 Sb03g046950.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.00e-08 36.1 65 111
Organism Sorghum bicolor
Domain Profile
  Me_Reader PHD
        PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                    iC +Cg  d +++ ++ Cd Cd+  H+ C+ +   ++p g  w+Cp C 
  Sb03g046950.1  65 ICETCGSGDRDDD-LLLCDRCDRGHHTFCLRPIAARVPIG-PWFCPVCA 111
                    8****76666655.************************99.9******6 PP
Protein Sequence
(Fasta)		MGRAAPPSSP SSPQLGRKRT AAPTPEPPTP RRYCSMDDVM RRARAVDAPP PVARARVYTY 60
YENLICETCG SGDRDDDLLL CDRCDRGHHT FCLRPIAARV PIGPWFCPVC APPAKAPKRF 120
PMKQTKIIDF FGIRKDGQDA QAPKCRLSQD ARRRRKRSLV MHKKRRRILP FVPSEDEARR 180
LKQMASLATA MTSSKTKFSN ELTYMPNMAP RSSNLARLEV GGMQVLPKED KESIELCRTM 240
QQRGECPPLL VVFDSLEGFT VQADADIKDM TFLAEYAGDV DYLEKRANDD IDCIMTLLLT 300
ADPSQRLVIC PDKRGNISRF ISGINNHTQD GKKKQNVKCV RYDIDGESHV LLVACRDIPR 360
GEKLYYDYNG YEHAYPTQHF L 381
Nucleotide Sequence
(Fasta)		ATGGGCCGCG CCGCGCCGCC GTCATCGCCG AGCTCGCCGC AGCTCGGGCG CAAGCGCACG 60
GCGGCTCCCA CACCGGAGCC GCCGACGCCG CGGCGCTACT GCTCCATGGA CGACGTCATG 120
CGCCGCGCGC GCGCCGTCGA CGCGCCGCCC CCCGTCGCCC GCGCGCGGGT GTACACCTAC 180
TACGAGAACC TCATCTGCGA GACCTGCGGC TCCGGCGACC GCGACGACGA CCTGCTCCTC 240
TGCGACCGCT GCGACCGCGG CCACCACACC TTCTGCCTCC GCCCCATCGC CGCCAGGGTC 300
CCCATCGGCC CCTGGTTCTG CCCCGTCTGC GCCCCGCCCG CCAAGGCCCC CAAGAGATTC 360
CCGATGAAGC AGACCAAGAT CATCGATTTC TTCGGGATTC GGAAGGATGG GCAGGATGCC 420
CAGGCCCCCA AATGTAGGCT CTCCCAAGAT GCTAGAAGGC GAAGGAAGCG TTCTCTTGTT 480
ATGCACAAGA AGAGGAGGAG GATACTGCCA TTTGTTCCAT CTGAAGATGA AGCTAGAAGA 540
CTAAAACAAA TGGCGTCTCT GGCCACTGCT ATGACGTCTT CTAAAACAAA GTTCAGTAAT 600
GAACTGACTT ACATGCCTAA TATGGCTCCT AGATCTTCCA ATCTGGCAAG ATTGGAGGTA 660
GGCGGTATGC AGGTTCTGCC CAAAGAGGAT AAGGAAAGTA TAGAGTTGTG CAGAACCATG 720
CAACAAAGAG GCGAATGCCC TCCACTTCTT GTGGTCTTCG ATTCCCTTGA AGGTTTCACT 780
GTGCAGGCTG ATGCTGATAT TAAGGATATG ACCTTCCTCG CTGAATATGC TGGGGATGTC 840
GATTATCTGG AGAAGAGGGC AAATGATGAT ATTGACTGCA TTATGACGCT CCTCTTGACA 900
GCTGACCCTT CCCAAAGGCT GGTCATTTGC CCTGACAAGC GGGGGAACAT TTCTCGCTTT 960
ATCAGTGGCA TCAATAACCA CACACAGGAT GGCAAGAAGA AGCAGAATGT AAAGTGTGTG 1020
CGGTATGACA TTGATGGGGA GAGCCATGTC TTGTTGGTGG CCTGCCGTGA TATACCTCGT 1080
GGTGAAAAGC TATATTACGA TTACAATGGA TACGAGCATG CCTATCCCAC TCAACATTTC 1140
CTCTAA 1147
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Zem-0084 GRMZM2G149587_P02 Zea mays 89 7e-158 553
WERAM-Sei-0011 Si001848m Setaria italica 88 8e-151 530
WERAM-Orgl-0015 OGLUM01G49340.1 Oryza glumaepatula 82 2e-140 496
WERAM-Orp-0016 OPUNC01G43970.1 Oryza punctata 82 2e-140 495
WERAM-Orm-0017 OMERI01G41800.1 Oryza meridionalis 82 3e-140 495
WERAM-Orr-0015 ORUFI01G48490.1 Oryza rufipogon 82 3e-140 495
WERAM-Orni-0015 ONIVA01G51190.1 Oryza nivara 82 3e-140 495
WERAM-Org-0015 ORGLA01G0387900.1 Oryza glaberrima 82 3e-140 495
WERAM-Ori-0016 BGIOSGA005241-PA Oryza indica 82 1e-139 493
WERAM-Orb-0015 OBART01G44970.1 Oryza barthii 82 1e-139 493
WERAM-Ors-0011 OS01T0965500-01 Oryza sativa 82 8e-139 490
WERAM-Orbr-0019 OB01G54220.1 Oryza brachyantha 80 8e-138 487
WERAM-Lep-0017 LPERR01G39410.1 Leersia perrieri 79 1e-135 480
WERAM-Brd-0061 BRADI2G61717.1 Brachypodium distachyon 75 5e-127 451
WERAM-Tra-0347 TRAES3BF082800240CFD_t1 Triticum aestivum 74 5e-126 448
WERAM-Tru-0048 TRIUR3_21302-P1 Triticum urartu 74 3e-115 412
WERAM-Mua-0093 GSMUA_Achr6P25240_001 Musa acuminata 66 4e-113 405
WERAM-Prp-0117 EMJ20963 Prunus persica 63 2e-109 393
WERAM-Viv-0102 VIT_16s0098g01510.t01 Vitis vinifera 62 5e-108 388
WERAM-Pot-0129 POPTR_0012s02530.1 Populus trichocarpa 63 2e-107 386
WERAM-Glm-0242 GLYMA18G52260.1 Glycine max 62 5e-106 381
WERAM-Thc-0039 EOY23615 Theobroma cacao 64 5e-106 381
WERAM-Sol-0132 Solyc11g005730.1.1 Solanum lycopersicum 61 5e-104 375
WERAM-Met-0006 AES58731 Medicago truncatula 62 1e-103 374
WERAM-Bro-0182 Bo9g173800.1 Brassica oleracea 61 7e-102 367
WERAM-Hov-0041 MLOC_39454.1 Hordeum vulgare 78 1e-101 367
WERAM-Brr-0147 Bra029401.1-P Brassica rapa 60 8e-101 364
WERAM-Arl-0102 fgenesh2_kg.6__ 934__ AT5G09790.2 Arabidopsis lyrata 61 2e-100 363
WERAM-Art-0128 AT5G24330.1 Arabidopsis thaliana 61 2e-99 359
WERAM-Sem-0042 EFJ28497 Selaginella moellendorffii 57 7e-96 348
WERAM-Aet-0004 EMT03211 Aegilops tauschii 61 3e-92 335
WERAM-Sot-0056 PGSC0003DMT400047656 Solanum tuberosum 62 6e-90 328
WERAM-Php-0094 PP1S403_14V6.1 Physcomitrella patens 53 2e-89 326
WERAM-Amt-0073 ERN19309 Amborella trichopoda 59 2e-77 286
WERAM-Xet-0165 ENSXETP00000005100.3 Xenopus tropicalis 30 2e-07 54.3
WERAM-Pof-0148 ENSPFOP00000012106.2 Poecilia formosa 33 4e-07 53.1
WERAM-Xim-0106 ENSXMAP00000009424.1 Xiphophorus maculatus 32 1e-06 52.0
Created Date 25-Jun-2016