| Tag |
Content |
| WERAM ID |
WERAM-Sob-0029 |
| Ensembl Protein ID |
Sb02g024010.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDM |
JHDM2 |
1.40e-65 |
221.7 |
345 |
573 |
|
| Organism |
Sorghum bicolor |
| Domain Profile |
HDM JHDM2
JHDM2.txt 5 rdgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy..............vgilkkkwaeedlkell..ksieee. 83
+ g lN++ lp +++ d+gPk y AyG a+e r++++t+lh+d+sdavn+l++ + lk ++ae+d+ke l +si+ +
Sb02g024010.1 345 KSGLLNVSALLPVDILKLDMGPKSYIAYGYAQELIRGDSVTKLHCDLSDAVNVLMHiaevepsdeeqqkgIRELKIRHAEQDKKECLgnSSIDGNe 440
4689****************************************************9999999999999999999999999999998224455543 PP
JHDM2.txt 84 .eldevtrkrvqdpkekpgalWhifaakdaekirellekvskeqga....evppdhdpihdqswyldrklrkrLfeeyGvegwtlvQklgdavlip 174
+++ + v + k galW+if+++d+ k++e+l k+ske+++ +v++ +p+hd+ +yl++k+++ L++eyG+e+wt+vQ lgdav+ip
Sb02g024010.1 441 tSMEHAHISSVSCEDDKAGALWDIFRREDVGKLKEYLIKHSKEFRHmyccPVEKIFNPVHDEKFYLTNKHKRELKKEYGIEPWTFVQGLGDAVFIP 536
323334444555556778****************************999989999***************************************** PP
JHDM2.txt 175 agapHqvqnlkscvkvaedFvsPEnvkecfrltkeyr 211
ag+pHqv+nlksc k+a dFvsPEn+++c+ lt+++r
Sb02g024010.1 537 AGCPHQVRNLKSCTKIALDFVSPENIQQCLSLTEDFR 573
***********************************98 PP
|
Protein Sequence
(Fasta) | MSAEVDTSDM SAEEVDPETK RKYASYLLHY LLPCLTQLNK DQMEEREAEA KIQVFGILCI 60
TCCKELRGHC LNINCQEGLV PKDKSRGVDY MHGGDSVTPY SEKDKETGLS SYQSKSIKWE 120
ADPGGIIRCP PSELGGCGNH VLELKQIFET DRLSKLEMEA LQLRNQVEPS DIVSIDICEC 180
SCSANHASSR KAATRENSTD NYIYCPISDD GKPDGLKHFQ KHWVKGEPVV VKGVDEKMKY 240
FCVQKNKMSK LSWEPEIMWA EVHGANTSSE TKTVKAVDCM SCCEVEICAE DFFNGYYDGR 300
MYLNGWPEML KLKDWPTSDH FENILPSHGK TYINSLPFQP YTNLKSGLLN VSALLPVDIL 360
KLDMGPKSYI AYGYAQELIR GDSVTKLHCD LSDAVNVLMH IAEVEPSDEE QQKGIRELKI 420
RHAEQDKKEC LGNSSIDGNE TSMEHAHISS VSCEDDKAGA LWDIFRREDV GKLKEYLIKH 480
SKEFRHMYCC PVEKIFNPVH DEKFYLTNKH KRELKKEYGI EPWTFVQGLG DAVFIPAGCP 540
HQVRNLKSCT KIALDFVSPE NIQQCLSLTE DFRRLPVGHR AKEDKLEVKK MIVYAVEHAL 600
AILKEPCTSP ESA 613Protein Fasta Sequence
>Sb02g024010.1|JHDM2|Sorghum bicolor
MSAEVDTSDMSAEEVDPETKRKYASYLLHYLLPCLTQLNKDQMEEREAEAKIQVFGILCITCCKELRGHCLNINCQEGLVPKDKSRGVDYMHGGDSVTPYSEKDKETGLSSYQSKSIKWEADPGGIIRCPPSELGGCGNHVLELKQIFETDRLSKLEMEALQLRNQVEPSDIVSIDICECSCSANHASSRKAATRENSTDNYIYCPISDDGKPDGLKHFQKHWVKGEPVVVKGVDEKMKYFCVQKNKMSKLSWEPEIMWAEVHGANTSSETKTVKAVDCMSCCEVEICAEDFFNGYYDGRMYLNGWPEMLKLKDWPTSDHFENILPSHGKTYINSLPFQPYTNLKSGLLNVSALLPVDILKLDMGPKSYIAYGYAQELIRGDSVTKLHCDLSDAVNVLMHIAEVEPSDEEQQKGIRELKIRHAEQDKKECLGNSSIDGNETSMEHAHISSVSCEDDKAGALWDIFRREDVGKLKEYLIKHSKEFRHMYCCPVEKIFNPVHDEKFYLTNKHKRELKKEYGIEPWTFVQGLGDAVFIPAGCPHQVRNLKSCTKIALDFVSPENIQQCLSLTEDFRRLPVGHRAKEDKLEVKKMIVYAVEHALAILKEPCTSPESA |
Nucleotide Sequence
(Fasta) | ATGTCGGCTG AGGTGGACAC ATCAGACATG AGCGCTGAGG AGGTTGATCC TGAAACAAAA 60
CGCAAATATG CCAGCTACCT GTTGCACTAC CTGTTGCCAT GTTTGACACA ACTGAACAAG 120
GACCAGATGG AAGAAAGAGA AGCAGAAGCC AAAATTCAAG TTTTTGGTAT TCTATGCATC 180
ACCTGTTGTA AGGAGCTCCG AGGACACTGT CTTAATATCA ATTGTCAGGA GGGACTGGTA 240
CCTAAGGATA AAAGTAGAGG AGTTGACTAT ATGCATGGTG GTGATAGTGT TACACCTTAT 300
TCAGAAAAGG ACAAAGAAAC AGGCTTGTCT AGTTACCAAT CTAAGTCTAT CAAATGGGAA 360
GCTGATCCTG GTGGGATCAT TCGTTGCCCT CCATCTGAAC TTGGTGGGTG TGGTAACCAT 420
GTCCTTGAGT TGAAACAAAT TTTTGAAACA GATAGGTTAA GTAAGCTCGA AATGGAGGCA 480
TTGCAACTGA GGAACCAGGT AGAACCTTCT GATATTGTCA GTATAGATAT ATGTGAATGC 540
TCATGTTCAG CTAATCATGC AAGTTCAAGG AAAGCTGCCA CCAGAGAGAA CTCCACAGAT 600
AACTACATAT ACTGTCCAAT ATCAGATGAT GGTAAGCCAG ATGGTCTCAA GCACTTCCAA 660
AAGCACTGGG TGAAAGGAGA GCCTGTAGTA GTGAAAGGGG TGGACGAAAA AATGAAATAT 720
TTTTGCGTTC AAAAAAATAA AATGTCTAAA TTGAGCTGGG AGCCTGAAAT AATGTGGGCT 780
GAAGTACATG GTGCCAATAC TAGTTCTGAG ACGAAAACTG TGAAAGCCGT CGATTGTATG 840
TCTTGCTGTG AGGTTGAGAT ATGCGCTGAG GACTTCTTCA ATGGCTATTA TGATGGTCGA 900
ATGTATCTTA ATGGTTGGCC TGAAATGCTT AAATTGAAGG ATTGGCCTAC TTCAGACCAT 960
TTTGAAAATA TTTTGCCTTC CCATGGAAAG ACATACATCA ATTCTTTGCC TTTTCAACCT 1020
TACACAAATT TGAAATCTGG TTTGCTAAAT GTCTCTGCAT TGCTTCCTGT TGACATCTTA 1080
AAGCTTGACA TGGGCCCAAA ATCATATATA GCTTATGGCT ATGCACAGGA ACTCATTAGA 1140
GGAGATTCTG TTACAAAGCT TCATTGTGAT TTGTCTGATG CGGTTAATGT TTTGATGCAT 1200
ATTGCCGAAG TTGAGCCTTC TGATGAAGAA CAACAAAAGG GGATAAGAGA ATTGAAAATA 1260
AGGCATGCAG AACAGGATAA AAAGGAATGC TTGGGGAATT CATCAATAGA TGGAAATGAA 1320
ACAAGCATGG AGCATGCTCA TATATCATCA GTTTCCTGCG AGGATGATAA AGCAGGTGCA 1380
CTATGGGATA TTTTCAGGAG GGAGGATGTT GGAAAGCTGA AAGAGTACCT CATAAAACAT 1440
TCCAAAGAAT TTCGCCATAT GTACTGTTGT CCAGTTGAAA AGATATTTAA CCCTGTACAT 1500
GATGAAAAGT TTTATCTGAC CAACAAACAC AAGAGGGAGC TCAAGAAGGA GTATGGAATC 1560
GAGCCATGGA CCTTTGTGCA AGGACTTGGA GATGCGGTTT TTATACCTGC TGGGTGTCCT 1620
CATCAAGTAC GAAATCTAAA GTCTTGCACC AAGATTGCTC TGGATTTTGT ATCACCGGAG 1680
AACATTCAGC AGTGTCTCAG CTTAACCGAG GATTTCCGGA GACTTCCAGT GGGCCACAGG 1740
GCAAAAGAAG ATAAACTAGA GGTGAAGAAG ATGATCGTCT ATGCCGTTGA ACATGCTTTG 1800
GCGATTCTGA AAGAGCCTTG CACATCCCCC GAGTCCGCAT AAGGGTTTAT GCTAGTCAGC 1860
GAGGGAAACT AGAGAACATG ATGGAATGTT ATGCGACAGT AGACGTGCAG GCTTTCCTTG 1920
TCGGCACAAA TAATAATAGT CTTGGAATAA CTGTAAGGGT AGATTTCGCT GATGGTGTGC 1980
ATCACTAAGA TCTGGGCCTA CTGAAAATTT AAATATTTTC TTTATGCCGT ACTATCTGTT 2040
ATGACAGAAT TTTAGGCTTG TTTGAACATC AGCAATCCTT TTCAGCCATA AAATAGTATT 2100
TTTC
2105Nucleotide Fasta Sequence
>Sb02g024010.1|JHDM2|Sorghum bicolor
ATGTCGGCTGAGGTGGACACATCAGACATGAGCGCTGAGGAGGTTGATCCTGAAACAAAACGCAAATATGCCAGCTACCTGTTGCACTACCTGTTGCCATGTTTGACACAACTGAACAAGGACCAGATGGAAGAAAGAGAAGCAGAAGCCAAAATTCAAGTTTTTGGTATTCTATGCATCACCTGTTGTAAGGAGCTCCGAGGACACTGTCTTAATATCAATTGTCAGGAGGGACTGGTACCTAAGGATAAAAGTAGAGGAGTTGACTATATGCATGGTGGTGATAGTGTTACACCTTATTCAGAAAAGGACAAAGAAACAGGCTTGTCTAGTTACCAATCTAAGTCTATCAAATGGGAAGCTGATCCTGGTGGGATCATTCGTTGCCCTCCATCTGAACTTGGTGGGTGTGGTAACCATGTCCTTGAGTTGAAACAAATTTTTGAAACAGATAGGTTAAGTAAGCTCGAAATGGAGGCATTGCAACTGAGGAACCAGGTAGAACCTTCTGATATTGTCAGTATAGATATATGTGAATGCTCATGTTCAGCTAATCATGCAAGTTCAAGGAAAGCTGCCACCAGAGAGAACTCCACAGATAACTACATATACTGTCCAATATCAGATGATGGTAAGCCAGATGGTCTCAAGCACTTCCAAAAGCACTGGGTGAAAGGAGAGCCTGTAGTAGTGAAAGGGGTGGACGAAAAAATGAAATATTTTTGCGTTCAAAAAAATAAAATGTCTAAATTGAGCTGGGAGCCTGAAATAATGTGGGCTGAAGTACATGGTGCCAATACTAGTTCTGAGACGAAAACTGTGAAAGCCGTCGATTGTATGTCTTGCTGTGAGGTTGAGATATGCGCTGAGGACTTCTTCAATGGCTATTATGATGGTCGAATGTATCTTAATGGTTGGCCTGAAATGCTTAAATTGAAGGATTGGCCTACTTCAGACCATTTTGAAAATATTTTGCCTTCCCATGGAAAGACATACATCAATTCTTTGCCTTTTCAACCTTACACAAATTTGAAATCTGGTTTGCTAAATGTCTCTGCATTGCTTCCTGTTGACATCTTAAAGCTTGACATGGGCCCAAAATCATATATAGCTTATGGCTATGCACAGGAACTCATTAGAGGAGATTCTGTTACAAAGCTTCATTGTGATTTGTCTGATGCGGTTAATGTTTTGATGCATATTGCCGAAGTTGAGCCTTCTGATGAAGAACAACAAAAGGGGATAAGAGAATTGAAAATAAGGCATGCAGAACAGGATAAAAAGGAATGCTTGGGGAATTCATCAATAGATGGAAATGAAACAAGCATGGAGCATGCTCATATATCATCAGTTTCCTGCGAGGATGATAAAGCAGGTGCACTATGGGATATTTTCAGGAGGGAGGATGTTGGAAAGCTGAAAGAGTACCTCATAAAACATTCCAAAGAATTTCGCCATATGTACTGTTGTCCAGTTGAAAAGATATTTAACCCTGTACATGATGAAAAGTTTTATCTGACCAACAAACACAAGAGGGAGCTCAAGAAGGAGTATGGAATCGAGCCATGGACCTTTGTGCAAGGACTTGGAGATGCGGTTTTTATACCTGCTGGGTGTCCTCATCAAGTACGAAATCTAAAGTCTTGCACCAAGATTGCTCTGGATTTTGTATCACCGGAGAACATTCAGCAGTGTCTCAGCTTAACCGAGGATTTCCGGAGACTTCCAGTGGGCCACAGGGCAAAAGAAGATAAACTAGAGGTGAAGAAGATGATCGTCTATGCCGTTGAACATGCTTTGGCGATTCTGAAAGAGCCTTGCACATCCCCCGAGTCCGCATAAGGGTTTATGCTAGTCAGCGAGGGAAACTAGAGAACATGATGGAATGTTATGCGACAGTAGACGTGCAGGCTTTCCTTGTCGGCACAAATAATAATAGTCTTGGAATAACTGTAAGGGTAGATTTCGCTGATGGTGTGCATCACTAAGATCTGGGCCTACTGAAAATTTAAATATTTTCTTTATGCCGTACTATCTGTTATGACAGAATTTTAGGCTTGTTTGAACATCAGCAATCCTTTTCAGCCATAAAATAGTATTTTTC
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
