WERAM Information

Tag Content
WERAM ID WERAM-Sob-0023
Ensembl Protein ID Sb02g018570.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb02g018570 Sb02g018570.1 Sb02g018570.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Tudor 0.018 16.1 242 273
Organism Sorghum bicolor
Domain Profile
  Me_Reader Tudor
      Tudor.txt   3 kvGlrVvakwssdGyfYsgkiVvkghrvesgeeyys 38 
                     vG +V+ +w +d+ fY++ i       +++  +y+
  Sb02g018570.1 242 LVGRKVMSRWPEDNSFYEAVI----SDYNAETGLYA 273
                    69******************9....44444444444 PP
Protein Sequence
(Fasta)		MEYRPSDSSG TDDDLPQFPN SRSIRGSGRV SGNGRALVPA SSYARAPTDM EAQIQQLEQE 60
AYCSVLRAFK AQSDAITWEK EGLMTELRKE LRVSDKAHRE LLNRVNNDNI ICSIREWRST 120
GGLQAGLSNN PQPIHDPVPS PTTSGRKRQK TSQSVPALPA PPLALHSQQL ATPTQPSSST 180
ARKAVPPGPK GKKMKPGQKV PGGSAAKPMS SSAGPSGRGP HMNRNFPGGS APEAQAQNLD 240
PLVGRKVMSR WPEDNSFYEA VISDYNAETG LYALVYDINT ANETWEWVDL KEMGPEDIRW 300
QEDDSGIDPV TYLRSRGAPT SGVRKPTGRG GPMPGSGRGR GLQKNMSKKD FPPPQNGVGK 360
RSSDDIDILH TESLIKEVEK VFSISNPDPQ EVEKAKKALK EQEQSLIDAI ARLAEASDGE 420
SDGHNRGRRN LYAGNQHQAN YIDAMPVGDQ ADAM 454
Nucleotide Sequence
(Fasta)		TCTTTTCTCC CTCCTCCGTT TCGCTTGCCC GAAATCGAAG TTGAAGTGTC CGATACCATA 60
CCAGCAGTAG CAGCACAGCG CAGCTAGTAG CTCTCTTGCT CCTCCCCACC CCCAACCTCT 120
CCGTCTCCTC CAAATCTCGC CGGATTCCGC CTCCCCGCCC GCCCCCGCAT CCGCCGCAGG 180
TGAGCGCTCG CTGGCCCTTG GCCGCCACGG TGGCGGCCTT GGGGGTGGCA GCTGGAGCCC 240
CGGCGTGGTG GAGGGAGCTG ACCCCTGTTC GTTGGGCGCT TTCAGGTTCG CGCCCGTTGC 300
ACCACCGCCG GTGGTGTGGG TGCTGGTTGG CGGAGTCGAC CCCGAGGGTC GGCCATGGAA 360
TACCGGCCCT CCGACAGCAG CGGAACTGAT GATGATCTTC CACAATTTCC AAATAGTAGG 420
AGTATCAGAG GCAGTGGACG TGTCAGTGGT AATGGGAGAG CTCTTGTTCC TGCCAGTTCA 480
TATGCTAGGG CACCGACAGA TATGGAAGCA CAAATTCAAC AACTTGAGCA AGAAGCATAT 540
TGCTCAGTCC TTCGTGCATT CAAAGCCCAG TCTGACGCCA TTACATGGGA GAAGGAAGGT 600
CTCATGACTG AACTTAGGAA GGAGCTAAGA GTATCTGACA AAGCACACAG GGAGCTGTTA 660
AATAGAGTCA ACAACGATAA TATTATATGT AGCATAAGGG AATGGAGATC AACAGGAGGG 720
CTTCAGGCAG GCTTGTCCAA TAACCCACAA CCAATTCATG ACCCTGTTCC CAGTCCTACC 780
ACCTCTGGAC GGAAGAGGCA AAAGACATCT CAATCTGTTC CTGCTTTACC TGCACCGCCT 840
CTTGCACTGC ATTCACAGCA GCTGGCTACA CCAACACAGC CATCGTCTTC AACTGCTAGG 900
AAAGCAGTTC CCCCAGGCCC TAAAGGCAAA AAGATGAAAC CAGGTCAGAA GGTACCAGGT 960
GGCTCTGCAG CCAAGCCCAT GTCATCTTCA GCAGGTCCTA GTGGAAGAGG ACCACACATG 1020
AATAGGAATT TTCCTGGTGG TTCTGCTCCT GAAGCTCAAG CTCAGAATCT TGATCCATTG 1080
GTTGGTCGTA AAGTGATGAG TCGGTGGCCT GAAGATAATA GTTTCTATGA AGCAGTCATA 1140
TCCGATTATA ATGCTGAAAC GGGCCTTTAT GCGTTGGTTT ATGACATCAA TACGGCAAAT 1200
GAAACCTGGG AGTGGGTTGA TCTTAAAGAG ATGGGACCTG AAGACATAAG ATGGCAAGAG 1260
GATGACTCTG GGATAGACCC TGTGACATAT CTGCGCAGCC GAGGTGCCCC AACTAGTGGG 1320
GTTAGGAAGC CAACAGGTCG CGGTGGGCCC ATGCCAGGTT CTGGAAGAGG AAGAGGATTA 1380
CAGAAGAACA TGTCTAAGAA AGATTTTCCA CCTCCACAAA ACGGTGTTGG CAAGAGAAGT 1440
TCCGATGACA TTGATATCCT TCATACTGAG AGCCTAATAA AAGAGGTGGA GAAAGTTTTC 1500
AGCATTAGCA ATCCTGATCC ACAGGAAGTA GAAAAGGCAA AGAAAGCACT GAAGGAGCAA 1560
GAACAGTCGT TGATTGACGC GATAGCAAGG CTTGCTGAGG CATCAGATGG TGAAAGTGAT 1620
GGGCACAATC GTGGGCGAAG GAACTTGTAT GCTGGTAACC AGCATCAAGC AAACTACATT 1680
GATGCCATGC CCGTTGGTGA CCAAGCTGAT GCCATGTAAA CACTGCATGA ACATGTATAC 1740
ACAACATAAG ATAATTGTCT GTTGTACAAT CCATTGCTAA TATTGGTTCT GGATTTAGGT 1800
ATCTGTAGGC TAAGTATCTT TTTGTTTTGG GTCACTTGAA TTTTTTTTAG TAGAATTGTA 1860
ATTCAGAATG CTGACCAAGT AAAGCTTGTA GATGTGTGTT TCTTTCTCTA GCTTTTTGTT 1920
AGTGTGGTCT CAGCTTCTAT ATGCATAATA AAAGGAAAAA GATCACGTTT GTAAAATACT 1980
AAGTTTATCT TTCACCATTT TAATGCAGCA ATCATTCGTC 2021
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Zem-0037 GRMZM2G049155_P01 Zea mays 90 0.0 687
WERAM-Hov-0091 MLOC_68440.1 Hordeum vulgare 70 1e-144 510
WERAM-Tra-0189 Traes_5BL_19FF81B34.2 Triticum aestivum 72 7e-142 501
WERAM-Tru-0020 TRIUR3_09050-P1 Triticum urartu 73 8e-142 501
WERAM-Aet-0094 EMT19648 Aegilops tauschii 72 4e-140 495
WERAM-Sei-0050 Si013860m Setaria italica 67 3e-111 399
WERAM-Bro-0066 Bo4g021690.1 Brassica oleracea 47 4e-75 279
WERAM-Brr-0021 Bra004832.1-P Brassica rapa 44 3e-57 220
Created Date 25-Jun-2016