| Tag |
Content |
| WERAM ID |
WERAM-Sob-0003 |
| Ensembl Protein ID |
Sb01g009580.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| Me_Reader |
WD40 |
6.40e-90 |
302.7 |
24 |
315 |
|
| Organism |
Sorghum bicolor |
| Domain Profile |
Me_Reader WD40
WD40.txt 2 hekelsavkfepaseegaslvaatvgseavtvydcqtqgeikllqkykghdeefysvawtadsnkrhslLasAgdrglirlldveag...qcikvl 94
h +++s+vkf s++g+ l+a++++++ ++v+ + ++ +++gh+e+++++++++d + lLasA+d++++r++d g ++ik+l
Sb01g009580.1 24 HRRAVSTVKF---SPDGR-LLASASADKLLRVWSSSDL---SPVAELAGHGEGVSDLSFSPDGR----LLASASDDRTVRIWDLAVGggaRLIKTL 108
999*******...*****.**************99998...***********************....9**************987644479**** PP
WD40.txt 95 vgHknaiaelkFsPkdenlllsaSfdkrvrlWdiktdklkkifeahsdevldvdydlrgslivScgmdgslkiWdvrskrrvcevklvddenpeks 190
gH+n+++++ FsP+ n+l s+Sfd++vr+W+++ +k++++++ahs++v++vd+d++g ivS ++dg++++Wd s +++c+++l+dde p+
Sb01g009580.1 109 TGHTNYAFCVSFSPH-GNVLASGSFDETVRVWEVRSGKCLRVLPAHSEPVTAVDFDREGDMIVSGSYDGLCRVWD--STTGHCVKTLIDDESPP-- 199
**************9.***********************************************************..*****************.. PP
WD40.txt 191 nrrVdcvrfs.ngdlilsgsldntivlWdirkikqsevavvvLkrfeyskteiyyislsfsvdnkkilvsgdedgkvyvwdlsveaalkakelllk 285
V++ +fs ng++il+++ld t++lW+++ +k +Lk+++++ + +y+i ++fs++n+k +vsg+ed++vy+wdl+ ++ +++k
Sb01g009580.1 200 ---VSFAKFSpNGKFILAATLDSTLRLWNFSAGK-------FLKTYTGHVNTKYCIPAAFSITNGKYIVSGSEDKCVYLWDLQ------SRRIVQK 279
...*******************************.......******************************************......******* PP
WD40.txt 286 lgkvtakimqtsvspnesiiiltaltddnivkiWdr 321
l+++t++++ +s++p+e++i+++al +d++vk+W +
Sb01g009580.1 280 LEGHTDTVIAVSCHPTENMIASGALDNDKTVKVWVQ 315
**********************************76 PP
|
Protein Sequence
(Fasta) | MAAPAADDAS ASPGYVLRST LEGHRRAVST VKFSPDGRLL ASASADKLLR VWSSSDLSPV 60
AELAGHGEGV SDLSFSPDGR LLASASDDRT VRIWDLAVGG GARLIKTLTG HTNYAFCVSF 120
SPHGNVLASG SFDETVRVWE VRSGKCLRVL PAHSEPVTAV DFDREGDMIV SGSYDGLCRV 180
WDSTTGHCVK TLIDDESPPV SFAKFSPNGK FILAATLDST LRLWNFSAGK FLKTYTGHVN 240
TKYCIPAAFS ITNGKYIVSG SEDKCVYLWD LQSRRIVQKL EGHTDTVIAV SCHPTENMIA 300
SGALDNDKTV KVWVQKEED 319Protein Fasta Sequence
>Sb01g009580.1|WD40|Sorghum bicolor
MAAPAADDASASPGYVLRSTLEGHRRAVSTVKFSPDGRLLASASADKLLRVWSSSDLSPVAELAGHGEGVSDLSFSPDGRLLASASDDRTVRIWDLAVGGGARLIKTLTGHTNYAFCVSFSPHGNVLASGSFDETVRVWEVRSGKCLRVLPAHSEPVTAVDFDREGDMIVSGSYDGLCRVWDSTTGHCVKTLIDDESPPVSFAKFSPNGKFILAATLDSTLRLWNFSAGKFLKTYTGHVNTKYCIPAAFSITNGKYIVSGSEDKCVYLWDLQSRRIVQKLEGHTDTVIAVSCHPTENMIASGALDNDKTVKVWVQKEED |
Nucleotide Sequence
(Fasta) | ATGGCGGCGC CGGCGGCCGA CGATGCCTCG GCATCCCCAG GCTACGTCCT TCGCTCCACA 60
CTTGAGGGGC ACCGCCGCGC CGTCTCAACC GTCAAGTTCT CCCCGGATGG TCGCCTTCTC 120
GCCTCCGCCT CCGCCGACAA GCTTCTTCGC GTGTGGTCTT CCTCCGATCT CAGCCCCGTT 180
GCGGAGCTCG CGGGCCATGG AGAGGGCGTC TCCGATCTCT CCTTCTCCCC CGACGGCCGC 240
CTCCTCGCCT CCGCTTCCGA TGACCGCACC GTCCGCATCT GGGACCTCGC CGTCGGCGGC 300
GGGGCCCGCC TTATCAAGAC GCTCACGGGC CACACCAACT ACGCCTTTTG CGTCTCCTTC 360
AGCCCCCATG GCAACGTCCT CGCCTCGGGA TCCTTCGACG AGACGGTGCG CGTGTGGGAG 420
GTCAGGTCCG GGAAGTGCCT CCGCGTGCTG CCGGCCCATT CCGAGCCCGT CACCGCCGTG 480
GACTTCGATC GCGAGGGCGA CATGATCGTG TCGGGGAGCT ACGACGGGCT CTGCCGCGTC 540
TGGGACTCGA CTACTGGTCA CTGCGTCAAA ACCCTCATCG ACGACGAGAG CCCACCGGTG 600
TCCTTTGCCA AGTTCTCCCC CAACGGCAAG TTCATCCTCG CGGCAACGCT TGACAGCACC 660
TTGAGGCTTT GGAACTTCTC AGCTGGAAAG TTTCTGAAGA CATATACAGG CCATGTTAAC 720
ACAAAGTACT GCATCCCAGC GGCATTTTCT ATCACAAATG GCAAGTATAT TGTCAGTGGC 780
TCTGAGGACA AATGCGTCTA CCTGTGGGAC CTGCAGTCAA GAAGAATAGT GCAGAAACTG 840
GAAGGGCATA CTGATACTGT CATTGCAGTT TCATGCCACC CCACGGAAAA CATGATCGCA 900
TCAGGGGCGC TTGATAATGA CAAGACAGTG AAAGTTTGGG TCCAAAAGGA AGAAGATTGA 960
TGAGTTGCCT GGTTACTCTC TTATCTACAT TGGCTGTCAT GTGGACTGAC TAATGGTAAG 1020
TAAGCTATGT AGCTTCCCAA GCAACTAAAG ATTGCTGCAG TGGAGAATGT GATGCTCCTG 1080
GAATGTGTAA CTGAGTGTTG TATTGTCTGC TCAGCAGCTC GGCGATGATT TTAGTGAACT 1140
CAATCAAAAC GTTCTGTAGA GCTATTCATG GGAGGTTGGG ATCATGTAAG AGACTTGACA 1200
CAACAATGCT TAGACTTCAT TTGTTGTGTT TCTGATTCTC TAATCTATGC GGAGCTGTTT 1260
TGTT
1265Nucleotide Fasta Sequence
>Sb01g009580.1|WD40|Sorghum bicolor
ATGGCGGCGCCGGCGGCCGACGATGCCTCGGCATCCCCAGGCTACGTCCTTCGCTCCACACTTGAGGGGCACCGCCGCGCCGTCTCAACCGTCAAGTTCTCCCCGGATGGTCGCCTTCTCGCCTCCGCCTCCGCCGACAAGCTTCTTCGCGTGTGGTCTTCCTCCGATCTCAGCCCCGTTGCGGAGCTCGCGGGCCATGGAGAGGGCGTCTCCGATCTCTCCTTCTCCCCCGACGGCCGCCTCCTCGCCTCCGCTTCCGATGACCGCACCGTCCGCATCTGGGACCTCGCCGTCGGCGGCGGGGCCCGCCTTATCAAGACGCTCACGGGCCACACCAACTACGCCTTTTGCGTCTCCTTCAGCCCCCATGGCAACGTCCTCGCCTCGGGATCCTTCGACGAGACGGTGCGCGTGTGGGAGGTCAGGTCCGGGAAGTGCCTCCGCGTGCTGCCGGCCCATTCCGAGCCCGTCACCGCCGTGGACTTCGATCGCGAGGGCGACATGATCGTGTCGGGGAGCTACGACGGGCTCTGCCGCGTCTGGGACTCGACTACTGGTCACTGCGTCAAAACCCTCATCGACGACGAGAGCCCACCGGTGTCCTTTGCCAAGTTCTCCCCCAACGGCAAGTTCATCCTCGCGGCAACGCTTGACAGCACCTTGAGGCTTTGGAACTTCTCAGCTGGAAAGTTTCTGAAGACATATACAGGCCATGTTAACACAAAGTACTGCATCCCAGCGGCATTTTCTATCACAAATGGCAAGTATATTGTCAGTGGCTCTGAGGACAAATGCGTCTACCTGTGGGACCTGCAGTCAAGAAGAATAGTGCAGAAACTGGAAGGGCATACTGATACTGTCATTGCAGTTTCATGCCACCCCACGGAAAACATGATCGCATCAGGGGCGCTTGATAATGACAAGACAGTGAAAGTTTGGGTCCAAAAGGAAGAAGATTGATGAGTTGCCTGGTTACTCTCTTATCTACATTGGCTGTCATGTGGACTGACTAATGGTAAGTAAGCTATGTAGCTTCCCAAGCAACTAAAGATTGCTGCAGTGGAGAATGTGATGCTCCTGGAATGTGTAACTGAGTGTTGTATTGTCTGCTCAGCAGCTCGGCGATGATTTTAGTGAACTCAATCAAAACGTTCTGTAGAGCTATTCATGGGAGGTTGGGATCATGTAAGAGACTTGACACAACAATGCTTAGACTTCATTTGTTGTGTTTCTGATTCTCTAATCTATGCGGAGCTGTTTTGTT
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
