WERAM Information

Tag Content
WERAM ID WERAM-Php-0073
Ensembl Protein ID PP1S3_506V6.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PP1S3_506V6 PP1S3_506V6.1 PP1S3_506V6.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 4.70e-29 102.8 177 375
Organism Physcomitrella patens
Domain Profile
  HDAC Class-I
     class-1.txt 100 eycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhk.r......vlyididlhhGDgveeafyttdrvmt 187
                       + ++tG++++a++++ ++++++a n aGG hha+  +  Gfc  nDi +a    l+ ++ +      +l +d+d+h G+g  + f++ drv+t
  PP1S34_438V6.1 177 RRSFASTGGTVAAMHTVMQGQRKVAANIAGGTHHAFAGHGEGFCVFNDIAVASAICLRDYPaKcnsqtpILVVDLDVHQGNGTSKLFENDDRVIT 271
                     556689*******************************************988766665443123334449************************* PP
     class-1.txt 188 vsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvk 282
                       +h  g+  +P   +++     +  +y + +P  dg +De+y + +   + ++ie ++P+ + +q G D+l +D +g   ++ +g+ +  ++v 
  PP1S34_438V6.1 272 FDMHGAGN--YPWKTKMK-----S--NYDIGFP--DGTKDEEYLAKLADWLPHLIELHDPSLIFFQAGVDALKEDSFGRLAMTRQGLLKRNNMVY 355
                     ****9999..78766554.....3..4766666..***************************************************998777665 PP
     class-1.txt 283 sf....nlpllvlGGGGYtl 298
                     s     nlpl++  GGGY+ 
  PP1S34_438V6.1 356 SAcmerNLPLVITMGGGYSR 375
                     5333449***********85 PP
Protein Sequence
(Fasta)		MGDLEELQQP QASFGGLGIP FQAVAVVGSP VFPNSIKWSQ DNLLAVASGH LVTILNPAEL 60
TGPKGFVPVT QSPVFDIGKV QPADFHDPEL MQFRLAREGR IGVRSIDWSP QGVASHGGCL 120
LAVCTTDSRV KLYREPFCDY TPEWVEVGDV TKLMHSCCVD DKFQGANAAY DVVTKDDRID 180
ENNLPVKAKK LQAQSQESLH RKVQRKEKIT QNTSENRYNI DDDDDCLTLI QAKKRAKKNL 240
LTTPPSSKNV FTRG 254
Nucleotide Sequence
(Fasta)		ATGGGAGACC TTGAAGAGCT CCAACAACCT CAGGCTAGCT TTGGCGGCCT AGGTATTCCC 60
TTCCAGGCCG TTGCAGTTGT GGGCTCTCCA GTTTTCCCCA ACTCTATCAA GTGGTCTCAG 120
GATAACCTTC TCGCCGTTGC GTCTGGCCAC CTGGTCACCA TCCTGAATCC AGCGGAGCTG 180
ACAGGTCCAA AAGGTTTTGT TCCAGTGACA CAAAGCCCAG TTTTTGATAT TGGAAAAGTG 240
CAACCTGCAG ACTTTCATGA CCCAGAGCTT ATGCAATTTC GATTGGCTAG AGAAGGGCGA 300
ATAGGGGTGC GATCAATAGA TTGGTCTCCA CAGGGTGTAG CATCTCATGG AGGCTGTTTA 360
TTGGCTGTCT GCACGACAGA CTCGAGAGTA AAGCTATATC GTGAACCATT TTGCGACTAC 420
ACCCCTGAAT GGGTGGAGGT TGGGGATGTA ACGAAACTCA TGCATTCTTG TTGTGTTGAT 480
GATAAGTTTC AAGGAGCAAA TGCAGCTTAT GATGTGGTTA CCAAGGATGA TAGGATTGAT 540
GAAAACAACT TGCCCGTTAA AGCAAAGAAA CTGCAAGCTC AATCTCAAGA ATCTCTACAT 600
AGAAAAGTGC AAAGGAAAGA GAAAATTACT CAAAACACAT CAGAGAATAG ATATAATATT 660
GACGATGATG ATGACTGTCT AACACTGATT CAAGCTAAAA AGAGAGCGAA AAAGAATCTC 720
TTGACAACTC CGCCGAGCTC CAAGAATGTG TTCACCAGGG GTTGA 766
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sem-0079 EFJ21331 Selaginella moellendorffii 50 1e-45 180
WERAM-Viv-0101 VIT_16s0098g01030.t01 Vitis vinifera 46 5e-36 148
WERAM-Sol-0083 Solyc06g073690.2.1 Solanum lycopersicum 45 8e-36 147
WERAM-Art-0085 AT3G49400.2 Arabidopsis thaliana 39 2e-35 145
WERAM-Hov-0033 MLOC_34719.9 Hordeum vulgare 51 5e-35 145
Created Date 25-Jun-2016