WERAM Information

Tag Content
WERAM ID WERAM-Php-0079
Ensembl Protein ID PP1S32_275V6.1
Gene Name PHYPADRAFT_161409
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PP1S32_275V6 PP1S32_275V6.1 PP1S32_275V6.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 2.10e-33 117.1 164 454
Organism Physcomitrella patens
Domain Profile
  HDAC Class-I
     class-1.txt  10 dvgeyhygqkhpmkpkrlsltheLvlnygl.skkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycq 103
                     ++++ ++g++hp +p rl+ +   + + gl s +   + +++a+++el  +h+ ++i  ++  e ++ + ++     ++ ++ +         c+
  PP1S312_11V6.1 164 MLLHEETGKSHPERPDRLRAIMGGLQASGLlSGTCFTIPAREATQAELELVHTANHIGAVQATEGQDLSYFTP--DTYANEHSALAARLAAGICT 256
                     4566677888888888888776655555540445556666788888888888888888888887777777763..34554444444433344454 PP
     class-1.txt 104 litGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellk.khkrvlyididlhhGDgveeafyttdrvmtvsfhkyge.e 196
                       + a +++ ++    +   a+      hha +++  Gfc  n+  +a    +    k+vl +d d+hhG+g +e f++   v+ +s+h+++   
  PP1S312_11V6.1 257 DLASAIMTGKAH----NGFAAVRP--PGHHAEQEQVMGFCLHNNACVAARAAQAaGAKKVLIVDWDVHHGNGTQEIFEQDPTVLYISLHRHEAgA 345
                     444444444322....22233333..34****************99999887775899*********************************9735 PP
     class-1.txt 197 ffPgtGdlsdvgaekgkyyavnvPlk.dgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf.nlpll 289
                     f+PgtG  ++vg + g  ++vn+P +  gi D  y + f++v+ ++ + feP++ ++  G D+  gD+lg  +++ +g+a++  ++ s     +l
  PP1S312_11V6.1 346 FYPGTGWAHQVGSGPGEGFCVNIPWScGGIGDGDYLSAFQHVVMPIARQFEPDMTIISAGFDAARGDPLGGCDVTPEGYAQMTFLLSSLsGGRIL 440
                     9***********************98368*****************************************************99999997789** PP
     class-1.txt 290 vlGGGGYtlrnvaR 303
                     v+  GGY+lr ++ 
  PP1S312_11V6.1 441 VVLEGGYNLRSISA 454
                     *********99875 PP
Protein Sequence
(Fasta)		MEVRPEAGDA SPAKKMKREV LGVEMILKQT AEIGMVLVGM AALRDGAPPT SLERHLAIKA 60
YSNLEGLVEC VAPNDLVSKK SLQSLIQQFS SPQDSTLRPV SLPIPAQDVS TPASVTLPAP 120
ASTKAASTSG KKSSTTSITA TLKPADKLGA SKTPMTPLKD FSNVSIVAVE DRVEKGPPAL 180
VFKTPSKDSS NVSIIAMEKS VEKVPTGLVF KTPISPLRDS PNVSITAMEE KVEKGRTALV 240
SKTAVSSLRD SSNVSITAME EKVEKGPTAL VFTTPISPSK DSSNVSITAM KEKVEEGPTA 300
PEAEIVERAR EVEAVEPQVD QKKYLQEIAL EVGLLESEVV TTVLPEMASA YMNSPITCGI 360
CKVLVNDSAS VLICDGCETG FHLICLQAQK VLDIPGKDWY CTKCLTANGG RPRQPIYGPI 420
RRGPGRPGSR TTWILKRRVR NTGASHERES LNFTKASLEV HTAKDSHLDS SKASASLS 478
Nucleotide Sequence
(Fasta)		TATTTGCTTG TGCACGTGCG GGATTCACGA TTGAGGGAAT GGAATCGAAA TTGCGGTAAA 60
CTCGATTCAA AGGATAATAG ATTCTGTGTT CCGGAAAGCT TGGTTTTGAA GACAGACGGC 120
GAGCTTTCAA GCGAACGGAA AGAGCAGGTT GAGCGACAGA CTAGACCTTG GTCTCGAATT 180
TCGCGGGGTT TGAGTAGGTT CAATTTCGAG CGATGGGAGG TTCGTGCATG CTTGGCGAAT 240
CGTATCATTT TTAGGATTCG CTGGATTGAA CATGGCAGGT TGCGAGGGGC CTTAAGAAAG 300
TGAGGCGACT TTAGAGAAGA CGAATTGTAG GTGAATTGTT TGCTGAGCGT GGGCTTTTCA 360
CTCAGGTTCT GTTGAAGATA AGCTCGCACG TTAAGGGATG GAAGTAAGGC CTGAAGCTGG 420
TGATGCATCT CCTGCGAAGA AAATGAAGAG GGAAGTCTTG GGAGTAGAGA TGATTTTGAA 480
GCAGACCGCG GAGATAGGGA TGGTATTGGT TGGCATGGCA GCCCTTCGAG ACGGTGCTCC 540
GCCTACTTCA TTGGAACGCC ATTTAGCGAT CAAGGCTTAT TCGAATTTGG AAGGGCTGGT 600
AGAATGTGTG GCACCTAATG ATTTGGTGTC GAAGAAATCC TTGCAATCCT TGATTCAGCA 660
ATTTAGCTCG CCACAGGATT CCACCTTGCG ACCTGTGTCG TTACCAATAC CAGCGCAGGA 720
TGTTTCGACC CCCGCCTCGG TAACTTTACC AGCACCAGCA TCTACGAAGG CTGCAAGTAC 780
TTCTGGAAAA AAATCAAGTA CTACCTCTAT TACCGCAACA TTGAAGCCTG CAGATAAACT 840
AGGTGCCTCC AAAACTCCCA TGACTCCCTT AAAAGATTTT TCAAATGTTT CGATTGTTGC 900
CGTAGAAGAT AGAGTTGAGA AAGGACCACC AGCCCTTGTC TTTAAAACTC CCTCAAAAGA 960
TTCTTCAAAT GTTTCAATTA TTGCAATGGA AAAAAGTGTT GAGAAAGTAC CAACGGGCCT 1020
TGTCTTTAAA ACCCCTATTT CTCCCTTAAG AGATTCTCCA AATGTTTCAA TTACTGCCAT 1080
GGAAGAAAAA GTTGAGAAAG GACGAACAGC TCTTGTCTCT AAAACTGCTG TGTCTTCCTT 1140
AAGAGATTCT TCAAATGTTT CAATTACTGC CATGGAAGAA AAAGTTGAGA AAGGACCAAC 1200
AGCCCTTGTC TTTACAACTC CCATATCTCC CTCAAAAGAT TCTTCAAATG TTTCAATTAC 1260
TGCCATGAAA GAAAAAGTCG AGGAGGGGCC AACAGCCCCT GAAGCAGAGA TTGTGGAACG 1320
AGCACGTGAA GTAGAGGCTG TTGAACCTCA AGTTGACCAA AAGAAATATC TCCAGGAGAT 1380
TGCCCTCGAA GTAGGCTTGT TAGAATCGGA AGTTGTCACG ACGGTGTTAC CAGAAATGGC 1440
GAGTGCATAT ATGAATTCGC CAATCACATG TGGCATTTGC AAGGTACTGG TAAATGATTC 1500
AGCAAGTGTC TTGATTTGTG ATGGATGTGA AACTGGGTTC CACTTGATCT GCCTTCAAGC 1560
TCAAAAGGTC TTGGATATTC CTGGAAAGGA CTGGTATTGC ACAAAATGTT TGACGGCTAA 1620
CGGGGGTCGA CCAAGGCAGC CTATATATGG TCCCATACGC CGAGGACCAG GAAGGCCTGG 1680
TTCCAGAACT ACGTGGATTT TGAAGAGGAG AGTTCGTAAT ACTGGCGCAT CTCACGAAAG 1740
GGAAAGTCTT AATTTCACAA AGGCATCACT GGAAGTTCAT ACTGCGAAGG ATTCTCATTT 1800
GGATTCGTCA AAGGCATCAG CAAGCCTTTC ATGA 1835
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0083 EOY12217 Theobroma cacao 50 6e-15 79.7
WERAM-Bro-0096 Bo5g080030.1 Brassica oleracea 42 2e-13 74.3
WERAM-Brr-0151 Bra030481.1-P Brassica rapa 42 2e-13 74.3
WERAM-Sol-0100 Solyc07g065000.2.1 Solanum lycopersicum 37 2e-13 74.3
WERAM-Art-0075 AT3G20280.1 Arabidopsis thaliana 40 1e-12 72.0
WERAM-Sot-0109 PGSC0003DMT400057154 Solanum tuberosum 37 1e-12 71.6
WERAM-Pot-0015 POPTR_0001s36940.1 Populus trichocarpa 44 7e-12 69.7
WERAM-Ori-0067 BGIOSGA021368-PA Oryza indica 46 1e-10 65.5
WERAM-Orb-0064 OBART06G12320.1 Oryza barthii 46 1e-10 65.5
WERAM-Orl-0102 KN541128.1_FGP003 Oryza longistaminata 46 2e-10 64.3
WERAM-Sob-0133 Sb10g011813.1 Sorghum bicolor 43 3e-10 64.3
WERAM-Orp-0062 OPUNC06G11740.1 Oryza punctata 44 7e-10 62.8
WERAM-Asm-0016 ENSAMXP00000002046.1 Astyanax mexicanus 42 3e-09 60.8
WERAM-Orn-0205 ENSONIP00000021515.1 Oreochromis niloticus 42 1e-08 58.9
WERAM-Dar-0224 ENSDARP00000130087.1 Danio rerio 40 2e-08 57.8
WERAM-Ten-0152 ENSTNIP00000015568.1 Tetraodon nigroviridis 40 4e-08 57.0
WERAM-Tar-0030 ENSTRUP00000007135.1 Takifugu rubripes 40 5e-08 56.6
WERAM-Pof-0142 ENSPFOP00000011949.1 Poecilia formosa 40 6e-08 56.2
WERAM-Leo-0069 ENSLOCP00000008820.1 Lepisosteus oculatus 43 8e-08 56.2
WERAM-Coi-0029 EAS31076 Coccidioides immitis 43 9e-08 55.8
WERAM-Ect-0075 ENSETEP00000008287.1 Echinops telfairi 43 1e-07 55.8
WERAM-Xim-0215 ENSXMAP00000017489.1 Xiphophorus maculatus 40 1e-07 55.8
WERAM-Ora-0045 ENSOANP00000007088.2 Ornithorhynchus anatinus 39 1e-07 55.5
WERAM-Crn-0020 AAW43237 Cryptococcus neoformans 45 5e-07 53.5
WERAM-Hov-0069 MLOC_5844.1 Hordeum vulgare 42 9e-07 52.4
WERAM-Mua-0076 GSMUA_Achr4P21300_001 Musa acuminata 46 1e-06 52.0
WERAM-Glm-0170 GLYMA13G34641.1 Glycine max 42 3e-06 50.8
WERAM-Amt-0073 ERN19309 Amborella trichopoda 39 4e-06 50.1
Created Date 25-Jun-2016