WERAM - Writers, Erasers & Readers of Histone Acetylation and Methylation Database

Protein
Classification
Domain Profile
Sequence
Orthology
TOP

WERAM Information

Tag

Content

WERAM ID

WERAM-Php-0080

Ensembl Protein ID

PP1S323_30V6.1

Gene Name

PHYPADRAFT_81336

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S323_30V6	PP1S323_30V6.1	PP1S323_30V6.1

Status

Unreviewed

Classification

Type	Family	E-value	Score	Start	End
HDAC	Class-II	4.90e-117	391.6	156	463

Organism

Physcomitrella patens

Domain Profile

HDAC Class-II

     class-2.txt   2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeaglle.kleelkarkatkeelqlvHseehvelletaeklekeelesltvdsdsiyle 95 
                     +++ yd++ml h+ +    ++hpE+p+R++ai+  lq++gll+  ++++ ar+at+ el+lvH+++h+  ++ +   e ++l+     + ++y++
  PP1S312_11V6.1 156 TAIGYDDRMLLHEETG---KSHPERPDRLRAIMGGLQASGLLSgTCFTIPAREATQAELELVHTANHIGAVQAT---EGQDLSY---FTPDTYAN 241
                     78999*9999998765...458*****************987658***************************99...5555655...45678*** PP
     class-2.txt  96 sksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtqeifykdpkvly 190
                     ++s+ aarla+G +++l++++++g+++ngfa+vRPPGHHae+++ mGFCl+nn+ vaa+ +q   + kk+livDwDvHhGnGtqeif++dp vly
  PP1S312_11V6.1 242 EHSALAARLAAGICTDLASAIMTGKAHNGFAAVRPPGHHAEQEQVMGFCLHNNACVAARAAQAAGA-KKVLIVDWDVHHGNGTQEIFEQDPTVLY 335
                     ***********************************************************9998776.**************************** PP
     class-2.txt 191 lSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtakcyatlt 285
                     +SlHR++ g f+p  g+g +++vg+g+gegf vN++w++g++gd +yl af++vv+pia++F+Pd+ ++saGfDaa+gdplgg++vt+++ya++t
  PP1S312_11V6.1 336 ISLHRHEAGAFYP--GTGWAHQVGSGPGEGFCVNIPWSCGGIGDGDYLSAFQHVVMPIARQFEPDMTIISAGFDAARGDPLGGCDVTPEGYAQMT 428
                     *************..******************************************************************************** PP
     class-2.txt 286 kqllklaggrvvlvlEGGynlkaiaeaveavvkaL 320
                       l++l+ggr+++vlEGGynl++i+++++av+k++
  PP1S312_11V6.1 429 FLLSSLSGGRILVVLEGGYNLRSISASAAAVMKVI 463
                     *****************************999875 PP

Protein Sequence
(Fasta)

MAVPAPVPTP VIIPESVAED PANPNFQTAM DMEVGKGHQA VHKVVVARTE DGHEPSSKKL 60
KRVHGEVEMV LRQTAEIVMV LVGVAALRGG AQPSPLECQL AAEAYEKLGA LVAVSTPQDL 120
VSKDALQSLM QQLTVPPSPP ARPAAKPVII QSPPSTVAAV APPTQRSSSA PSPAPAAQVP 180
ALAITHSSSQ SSSPLPSTAS GSLSSNSKVS ALPAPLVASA PASETIPASA TALASVSKEA 240
APESKTAASA SKEAPSASKT ASVASKTASS APKAAAPAPK TVPKEISKAV ASATGKVKLL 300
EQVQTSPSLL VSESPSDTPS TAPGANINTS AAISITPIAV SKISKTGGST SPVNLQLNSI 360
VETQPTTTVV MKDQRGNQAP KALARQRGLK NMFNEQQTVL DPQQAHQQIA LGVQILLKPT 420
VVIPAFTQPL GGYMSTPIPC GICKLMMDST NDVLICDGCD AGSHLSCLQM RFNASIPKSD 480
WYCPKCVTTN CGRPQPPKYG PLRRGPAGQS GPKNSWTMQH GRGSDSSKSQ TSGKLLLESR 540
SKEVDSDQDS VEPNAAVKIP TSAFQDLSIP ETSGKRFDTE CLMGVVTNKD EYFRKHSRNA 600
RGRAQIISKK TSACSVEERG REIDPGKHAQ IGAAYDSMIL VEWLGPVVSA SHDRLHSSVC 660
SVGGVTIRVQ DTAFFRSKSL DVAPYIARIQ VLLGAFHEHD LPVNMCRPVI SDPREVYESN 720
HCDNNLVGSI QGPCLVLPPL QFQEEVERRS KITVEESYLP LFLCQVNAAA I 771

Nucleotide Sequence
(Fasta)

ATGGCTGTGC CAGCACCTGT TCCAACACCT GTGATTATAC CTGAGTCCGT GGCTGAGGAC 60
CCTGCAAATC CAAACTTCCA AACGGCAATG GACATGGAAG TTGGAAAAGG CCATCAAGCA 120
GTTCACAAAG TGGTAGTAGC AAGAACCGAG GATGGCCATG AGCCTTCATC TAAGAAGCTG 180
AAGAGAGTTC ACGGGGAAGT GGAGATGGTG TTAAGGCAGA CAGCGGAGAT AGTGATGGTC 240
TTGGTCGGGG TAGCTGCTCT TCGAGGTGGG GCTCAACCTA GCCCTCTGGA ATGTCAGTTG 300
GCTGCAGAGG CGTACGAGAA ATTAGGAGCT CTTGTAGCAG TCTCTACTCC GCAGGATTTG 360
GTGTCGAAGG ACGCTTTGCA ATCCTTGATG CAGCAGTTGA CTGTGCCGCC GTCTCCTCCT 420
GCTCGGCCAG CTGCCAAGCC TGTCATCATT CAATCACCAC CGTCTACGGT AGCAGCAGTA 480
GCACCACCAA CACAGCGTTC CTCATCAGCG CCATCTCCAG CACCAGCAGC TCAAGTTCCG 540
GCATTAGCAA TTACACATTC ATCATCGCAG TCATCTTCCC CATTGCCATC CACTGCTTCA 600
GGATCATTAT CTTCAAATTC CAAAGTATCC GCACTACCAG CACCTCTAGT CGCATCTGCT 660
CCAGCTTCTG AAACAATACC AGCGTCAGCA ACTGCATTGG CTTCTGTATC AAAAGAAGCT 720
GCCCCAGAAT CTAAAACAGC TGCTTCGGCA TCAAAAGAAG CTCCTTCAGC CTCAAAAACC 780
GCTTCTGTAG CATCAAAGAC AGCTTCTTCA GCACCAAAAG CAGCCGCTCC AGCACCGAAA 840
ACTGTACCGA AAGAAATATC TAAAGCTGTA GCATCAGCAA CTGGCAAAGT AAAATTGTTG 900
GAACAAGTGC AAACGTCACC CTCATTGCTT GTTAGCGAGT CTCCATCTGA CACGCCATCA 960
ACCGCACCAG GGGCCAATAT TAACACATCT GCGGCAATAT CAATCACTCC AATTGCTGTT 1020
TCAAAGATAT CGAAAACTGG AGGTTCCACT AGTCCAGTGA ATCTGCAATT GAATTCTATT 1080
GTAGAAACTC AACCCACAAC CACTGTGGTC ATGAAAGACC AAAGAGGGAA TCAGGCACCG 1140
AAGGCCCTAG CGAGGCAAAG GGGTTTGAAA AATATGTTCA ATGAGCAGCA GACTGTGTTG 1200
GATCCACAGC AAGCACACCA GCAAATAGCC TTGGGAGTGC AAATTCTCTT GAAGCCCACG 1260
GTTGTAATTC CAGCCTTTAC GCAACCACTT GGAGGTTATA TGAGTACCCC AATTCCGTGT 1320
GGCATATGTA AGCTGATGAT GGATTCGACA AATGATGTTC TGATTTGTGA CGGATGTGAC 1380
GCTGGCTCTC ATTTATCTTG CTTACAAATG AGGTTCAATG CGAGCATTCC AAAGAGTGAC 1440
TGGTATTGCC CGAAATGTGT GACGACAAAC TGTGGTCGGC CACAGCCTCC CAAGTATGGG 1500
CCCCTGCGCC GTGGACCTGC CGGACAGTCT GGGCCTAAGA ATTCATGGAC TATGCAGCAT 1560
GGCCGCGGAA GCGACTCATC CAAGAGTCAA ACTTCTGGAA AACTTCTGTT GGAATCCCGA 1620
AGTAAGGAGG TCGATTCAGA TCAGGATTCA GTTGAGCCCA ATGCAGCGGT GAAGATACCA 1680
ACATCTGCAT TTCAGGATCT CAGCATTCCT GAAACTTCAG GAAAGAGATT CGATACCGAG 1740
TGCCTCATGG GTGTAGTTAC GAACAAGGAC GAGTATTTCC GGAAACATTC ACGGAATGCT 1800
AGAGGTAGAG CTCAAATTAT CAGCAAGAAA ACATCAGCTT GTTCTGTCGA AGAACGCGGA 1860
CGGGAAATTG ATCCTGGAAA ACATGCACAG ATTGGGGCAG CATATGACAG CATGATTCTG 1920
GTGGAGTGGC TTGGCCCGGT GGTGAGTGCA AGTCACGATA GACTTCACTC CTCGGTGTGC 1980
TCTGTAGGAG GTGTAACTAT ACGTGTGCAG GACACTGCCT TCTTCCGATC AAAATCTCTG 2040
GATGTAGCGC CTTATATTGC TAGGATCCAG GTACTGTTGG GTGCTTTTCA CGAACATGAT 2100
CTTCCAGTTA ACATGTGCCG GCCAGTGATT AGCGACCCAA GAGAGGTATA TGAATCCAAC 2160
CATTGTGACA ACAATCTAGT GGGATCCATT CAGGGTCCTT GTCTGGTCCT GCCGCCTTTG 2220
CAATTCCAGG AGGAAGTGGA GCGACGTTCA AAGATCACAG TAGAGGAGTC TTATCTACCT 2280
CTATTTTTAT GCCAGGTGAA TGCTGCGGCT ATTTAA 2317

Nucleotide Fasta Sequence

>PP1S323_30V6.1|Class-II|Physcomitrella patens
ATGGCTGTGCCAGCACCTGTTCCAACACCTGTGATTATACCTGAGTCCGTGGCTGAGGACCCTGCAAATCCAAACTTCCAAACGGCAATGGACATGGAAGTTGGAAAAGGCCATCAAGCAGTTCACAAAGTGGTAGTAGCAAGAACCGAGGATGGCCATGAGCCTTCATCTAAGAAGCTGAAGAGAGTTCACGGGGAAGTGGAGATGGTGTTAAGGCAGACAGCGGAGATAGTGATGGTCTTGGTCGGGGTAGCTGCTCTTCGAGGTGGGGCTCAACCTAGCCCTCTGGAATGTCAGTTGGCTGCAGAGGCGTACGAGAAATTAGGAGCTCTTGTAGCAGTCTCTACTCCGCAGGATTTGGTGTCGAAGGACGCTTTGCAATCCTTGATGCAGCAGTTGACTGTGCCGCCGTCTCCTCCTGCTCGGCCAGCTGCCAAGCCTGTCATCATTCAATCACCACCGTCTACGGTAGCAGCAGTAGCACCACCAACACAGCGTTCCTCATCAGCGCCATCTCCAGCACCAGCAGCTCAAGTTCCGGCATTAGCAATTACACATTCATCATCGCAGTCATCTTCCCCATTGCCATCCACTGCTTCAGGATCATTATCTTCAAATTCCAAAGTATCCGCACTACCAGCACCTCTAGTCGCATCTGCTCCAGCTTCTGAAACAATACCAGCGTCAGCAACTGCATTGGCTTCTGTATCAAAAGAAGCTGCCCCAGAATCTAAAACAGCTGCTTCGGCATCAAAAGAAGCTCCTTCAGCCTCAAAAACCGCTTCTGTAGCATCAAAGACAGCTTCTTCAGCACCAAAAGCAGCCGCTCCAGCACCGAAAACTGTACCGAAAGAAATATCTAAAGCTGTAGCATCAGCAACTGGCAAAGTAAAATTGTTGGAACAAGTGCAAACGTCACCCTCATTGCTTGTTAGCGAGTCTCCATCTGACACGCCATCAACCGCACCAGGGGCCAATATTAACACATCTGCGGCAATATCAATCACTCCAATTGCTGTTTCAAAGATATCGAAAACTGGAGGTTCCACTAGTCCAGTGAATCTGCAATTGAATTCTATTGTAGAAACTCAACCCACAACCACTGTGGTCATGAAAGACCAAAGAGGGAATCAGGCACCGAAGGCCCTAGCGAGGCAAAGGGGTTTGAAAAATATGTTCAATGAGCAGCAGACTGTGTTGGATCCACAGCAAGCACACCAGCAAATAGCCTTGGGAGTGCAAATTCTCTTGAAGCCCACGGTTGTAATTCCAGCCTTTACGCAACCACTTGGAGGTTATATGAGTACCCCAATTCCGTGTGGCATATGTAAGCTGATGATGGATTCGACAAATGATGTTCTGATTTGTGACGGATGTGACGCTGGCTCTCATTTATCTTGCTTACAAATGAGGTTCAATGCGAGCATTCCAAAGAGTGACTGGTATTGCCCGAAATGTGTGACGACAAACTGTGGTCGGCCACAGCCTCCCAAGTATGGGCCCCTGCGCCGTGGACCTGCCGGACAGTCTGGGCCTAAGAATTCATGGACTATGCAGCATGGCCGCGGAAGCGACTCATCCAAGAGTCAAACTTCTGGAAAACTTCTGTTGGAATCCCGAAGTAAGGAGGTCGATTCAGATCAGGATTCAGTTGAGCCCAATGCAGCGGTGAAGATACCAACATCTGCATTTCAGGATCTCAGCATTCCTGAAACTTCAGGAAAGAGATTCGATACCGAGTGCCTCATGGGTGTAGTTACGAACAAGGACGAGTATTTCCGGAAACATTCACGGAATGCTAGAGGTAGAGCTCAAATTATCAGCAAGAAAACATCAGCTTGTTCTGTCGAAGAACGCGGACGGGAAATTGATCCTGGAAAACATGCACAGATTGGGGCAGCATATGACAGCATGATTCTGGTGGAGTGGCTTGGCCCGGTGGTGAGTGCAAGTCACGATAGACTTCACTCCTCGGTGTGCTCTGTAGGAGGTGTAACTATACGTGTGCAGGACACTGCCTTCTTCCGATCAAAATCTCTGGATGTAGCGCCTTATATTGCTAGGATCCAGGTACTGTTGGGTGCTTTTCACGAACATGATCTTCCAGTTAACATGTGCCGGCCAGTGATTAGCGACCCAAGAGAGGTATATGAATCCAACCATTGTGACAACAATCTAGTGGGATCCATTCAGGGTCCTTGTCTGGTCCTGCCGCCTTTGCAATTCCAGGAGGAAGTGGAGCGACGTTCAAAGATCACAGTAGAGGAGTCTTATCTACCTCTATTTTTATGCCAGGTGAATGCTGCGGCTATTTAA

Sequence Source

Ensembl

Orthology

WERAM ID	Ensembl Protein ID	Species	Identity	E-value	Score
WERAM-Orb-0064	OBART06G12320.1	Oryza barthii	26	1e-22	105
WERAM-Orp-0062	OPUNC06G11740.1	Oryza punctata	26	9e-21	99.8
WERAM-Orl-0102	KN541128.1_FGP003	Oryza longistaminata	25	4e-20	97.8
WERAM-Sob-0133	Sb10g011813.1	Sorghum bicolor	37	5e-19	94.4
WERAM-Thc-0083	EOY12217	Theobroma cacao	41	1e-18	92.8
WERAM-Pot-0015	POPTR_0001s36940.1	Populus trichocarpa	37	3e-18	91.7
WERAM-Ori-0067	BGIOSGA021368-PA	Oryza indica	25	4e-18	91.3
WERAM-Sot-0109	PGSC0003DMT400057154	Solanum tuberosum	38	4e-18	90.9
WERAM-Sol-0100	Solyc07g065000.2.1	Solanum lycopersicum	37	1e-17	89.7
WERAM-Brr-0178	Bra035795.1-P	Brassica rapa	40	2e-16	85.5
WERAM-Art-0075	AT3G20280.1	Arabidopsis thaliana	39	3e-16	85.1
WERAM-Bro-0096	Bo5g080030.1	Brassica oleracea	36	2e-14	79.0
WERAM-Xim-0017	ENSXMAP00000001734.1	Xiphophorus maculatus	44	4e-09	60.8
WERAM-Pof-0190	ENSPFOP00000016034.2	Poecilia formosa	44	5e-09	60.8
WERAM-Dar-0123	ENSDARP00000101556.2	Danio rerio	39	8e-09	60.1
WERAM-Cae-0003	ZK783.4	Caenorhabditis elegans	40	1e-08	59.7
WERAM-Orla-0108	ENSORLP00000012999.2	Oryzias latipes	49	1e-08	59.7
WERAM-Coi-0029	EAS31076	Coccidioides immitis	40	1e-08	59.3
WERAM-Gam-0159	ENSGMOP00000015657.1	Gadus morhua	49	2e-08	59.3
WERAM-Leo-0069	ENSLOCP00000008820.1	Lepisosteus oculatus	38	2e-08	58.5
WERAM-Ten-0111	ENSTNIP00000012344.1	Tetraodon nigroviridis	29	3e-08	58.5
WERAM-Tar-0092	ENSTRUP00000018575.1	Takifugu rubripes	49	3e-08	58.2
WERAM-Orn-0037	ENSONIP00000004107.1	Oreochromis niloticus	43	3e-08	58.2
WERAM-Xet-0040	ENSXETP00000013295.2	Xenopus tropicalis	43	6e-08	57.4
WERAM-Dio-0083	ENSDORP00000008289.1	Dipodomys ordii	47	8e-08	57.0
WERAM-Gaa-0034	ENSGACP00000005477.1	Gasterosteus aculeatus	47	8e-08	57.0
WERAM-Cap-0022	ENSCPOP00000001918.2	Cavia porcellus	36	1e-07	56.6
WERAM-Ora-0045	ENSOANP00000007088.2	Ornithorhynchus anatinus	37	1e-07	56.2
WERAM-Anc-0159	ENSACAP00000014763.2	Anolis carolinensis	43	1e-07	56.2
WERAM-Tas-0090	ENSTSYP00000009569.1	Tarsius syrichta	47	1e-07	56.2
WERAM-Sus-0205	ENSSSCP00000027610.1	Sus scrofa	37	1e-07	56.2
WERAM-Asm-0016	ENSAMXP00000002046.1	Astyanax mexicanus	35	1e-07	56.2
WERAM-Fec-0166	ENSFCAP00000025364.1	Felis catus	45	1e-07	56.2
WERAM-Mum-0137	ENSMUSP00000039757.6	Mus musculus	47	1e-07	56.2
WERAM-Ect-0049	ENSETEP00000005221.1	Echinops telfairi	45	2e-07	55.8
WERAM-Paa-0158	ENSPANP00000017595.1	Papio anubis	39	2e-07	55.8
WERAM-Chs-0188	ENSCSAP00000011667.1	Chlorocebus sabaeus	39	2e-07	55.8
WERAM-Bot-0172	ENSBTAP00000026857.5	Bos taurus	45	2e-07	55.8
WERAM-Tut-0130	ENSTTRP00000010567.1	Tursiops truncatus	38	2e-07	55.5
WERAM-Prc-0102	ENSPCAP00000009508.1	Procavia capensis	38	2e-07	55.5
WERAM-Ova-0065	ENSOARP00000007370.1	Ovis aries	45	2e-07	55.5
WERAM-Mam-0136	ENSMMUP00000019759.2	Macaca mulatta	39	2e-07	55.5
WERAM-Caf-0142	ENSCAFP00000019619.4	Canis familiaris	45	2e-07	55.5
WERAM-Aim-0174	ENSAMEP00000016377.1	Ailuropoda melanoleuca	45	2e-07	55.5
WERAM-Vip-0034	ENSVPAP00000003030.1	Vicugna pacos	45	2e-07	55.5
WERAM-Eqc-0039	ENSECAP00000006152.1	Equus caballus	45	2e-07	55.5
WERAM-Pes-0169	ENSPSIP00000020026.1	Pelodiscus sinensis	45	2e-07	55.5
WERAM-Myl-0077	ENSMLUP00000006119.2	Myotis lucifugus	45	2e-07	55.5
WERAM-Hos-0233	ENSP00000353458.1	Homo sapiens	45	2e-07	55.5
WERAM-Nol-0034	ENSNLEP00000004217.1	Nomascus leucogenys	45	2e-07	55.5
WERAM-Pat-0053	ENSPTRP00000010622.3	Pan troglodytes	45	2e-07	55.5
WERAM-Ict-0105	ENSSTOP00000010948.2	Ictidomys tridecemlineatus	45	2e-07	55.5
WERAM-Mup-0187	ENSMPUP00000016202.1	Mustela putorius furo	45	2e-07	55.5
WERAM-Ptv-0151	ENSPVAP00000012529.1	Pteropus vampyrus	45	2e-07	55.1
WERAM-Caj-0072	ENSCJAP00000012119.1	Callithrix jacchus	45	3e-07	55.1
WERAM-Soa-0035	ENSSARP00000003259.1	Sorex araneus	45	3e-07	55.1
WERAM-Orc-0125	ENSOCUP00000010852.2	Oryctolagus cuniculus	45	3e-07	55.1
WERAM-Mim-0090	ENSMICP00000008442.1	Microcebus murinus	45	3e-07	55.1
WERAM-Otg-0032	ENSOGAP00000001999.2	Otolemur garnettii	45	3e-07	55.1
WERAM-Lac-0014	ENSLACP00000002295.1	Latimeria chalumnae	31	3e-07	55.1
WERAM-Mod-0091	ENSMODP00000013694.3	Monodelphis domestica	41	3e-07	55.1
WERAM-Ran-0043	ENSRNOP00000009080.6	Rattus norvegicus	45	3e-07	54.7
WERAM-Tag-0145	ENSTGUP00000012299.1	Taeniopygia guttata	45	3e-07	54.7
WERAM-Dan-0180	ENSDNOP00000022618.1	Dasypus novemcinctus	41	4e-07	54.7
WERAM-Meg-0098	ENSMGAP00000009424.2	Meleagris gallopavo	41	4e-07	54.3
WERAM-Gaga-0165	ENSGALP00000038228.2	Gallus gallus	41	4e-07	54.3
WERAM-Mae-0078	ENSMEUP00000007759.1	Macropus eugenii	41	5e-07	54.3
WERAM-Gog-0089	ENSGGOP00000007521.2	Gorilla gorilla	43	5e-07	54.3
WERAM-Osl-0003	ABO94520	Ostreococcus lucimarinus	42	5e-07	54.3
WERAM-Ere-0114	ENSEEUP00000012051.1	Erinaceus europaeus	43	5e-07	54.3
WERAM-Pem-0023	ENSPMAP00000003298.1	Petromyzon marinus	46	6e-07	53.9
WERAM-Fia-0048	ENSFALP00000003379.1	Ficedula albicollis	38	6e-07	53.9
WERAM-Poa-0111	ENSPPYP00000014364.2	Pongo abelii	38	6e-07	53.9
WERAM-Loa-0002	ENSLAFP00000000253.2	Loxodonta africana	43	6e-07	53.9
WERAM-Sah-0049	ENSSHAP00000005524.1	Sarcophilus harrisii	43	7e-07	53.9
WERAM-Tub-0047	ENSTBEP00000005645.1	Tupaia belangeri	44	7e-07	53.5
WERAM-Anp-0124	ENSAPLP00000013805.1	Anas platyrhynchos	44	8e-07	53.5
WERAM-Chh-0094	ENSCHOP00000010801.1	Choloepus hoffmanni	44	8e-07	53.5
WERAM-Lab-0033	EDR12730	Laccaria bicolor	27	1e-06	52.8
WERAM-Orbr-0019	OB01G54220.1	Oryza brachyantha	34	2e-06	52.4

Created Date

25-Jun-2016

WERAM Information

Protein Fasta Sequence

Nucleotide Fasta Sequence