| Tag |
Content |
| WERAM ID |
WERAM-Pot-0067 |
| Ensembl Protein ID |
POPTR_0005s19230.1 |
| Gene Name |
POPTR_0005s19230g |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| Me_Reader |
WD40 |
1.40e-100 |
338 |
20 |
315 |
|
| Organism |
Populus trichocarpa |
| Domain Profile |
Me_Reader WD40
WD40.txt 2 hekelsavkfepaseegaslvaatvgseavtvydcqtq....geikllqkykghdeefysvawtadsnkrhslLasAgdrglirlldveag 88
h+ ++s+vkf s +g+ l+ ++++++++++y + + i l+ ++gh+++++++a+++ds+ +++sA+d++++rl+dv +g
POPTR_0005s19230.1 20 HKSPISSVKF---SADGR-LLGSSSADKTLRTYSISLSnpptSPITHLHDFHGHEQGVSDLAFSSDSR----FIVSASDDKTLRLWDVTTG 102
999*******...*****.****************9888887789999********************....9****************** PP
WD40.txt 89 qcikvlvgHknaiaelkFsPkdenlllsaSfdkrvrlWdiktdklkkifeahsdevldvdydlrgslivScgmdgslkiWdvrskrrvcev 179
+ ik+l gH+n++++++F+P+ +n+++s+Sfd++vr+Wd+k +k++k+++ahsd+v++vd++++gslivS+++dg+++iWd +++c +
POPTR_0005s19230.1 103 HTIKTLHGHTNYVFCVNFNPQ-SNMIVSGSFDETVRIWDVKSGKCLKVLPAHSDPVTAVDFNREGSLIVSSSYDGLCRIWD--AGTGHCIK 190
*********************.***********************************************************..9******* PP
WD40.txt 180 klvddenpeksnrrVdcvrfs.ngdlilsgsldntivlWdirkikqsevavvvLkrfeyskteiyyislsfsvdnkkilvsgdedgkvyvw 269
+l+ddenp+ V++v+fs ng++il+g+ldn ++lW+++ +k +Lk+++++ + +++is fsv+n+k +v g+ed +vy+w
POPTR_0005s19230.1 191 TLIDDENPP-----VSFVKFSpNGKFILVGTLDNNLRLWNFSTGK-------FLKTYTGHVNTKFCISPTFSVTNGKYIVGGSEDSCVYLW 269
*********.....*******************************.......*************************************** PP
WD40.txt 270 dlsveaalkakelllklgkvtakimqtsvspnesiiiltaltddnivkiWdr 321
+l+ ++++++kl+++t+++++++++p+++ii+++al +d++vkiW++
POPTR_0005s19230.1 270 ELQ------SRKIVQKLEGHTDTVISVACHPTQNIIASGALGNDKTVKIWTQ 315
***......*****************************************97 PP
|
Protein Sequence
(Fasta) | MSAPTESYKP YTLTQTLTGH KSPISSVKFS ADGRLLGSSS ADKTLRTYSI SLSNPPTSPI 60
THLHDFHGHE QGVSDLAFSS DSRFIVSASD DKTLRLWDVT TGHTIKTLHG HTNYVFCVNF 120
NPQSNMIVSG SFDETVRIWD VKSGKCLKVL PAHSDPVTAV DFNREGSLIV SSSYDGLCRI 180
WDAGTGHCIK TLIDDENPPV SFVKFSPNGK FILVGTLDNN LRLWNFSTGK FLKTYTGHVN 240
TKFCISPTFS VTNGKYIVGG SEDSCVYLWE LQSRKIVQKL EGHTDTVISV ACHPTQNIIA 300
SGALGNDKTV KIWTQEI 317Protein Fasta Sequence
>POPTR_0005s19230.1|WD40|Populus trichocarpa
MSAPTESYKPYTLTQTLTGHKSPISSVKFSADGRLLGSSSADKTLRTYSISLSNPPTSPITHLHDFHGHEQGVSDLAFSSDSRFIVSASDDKTLRLWDVTTGHTIKTLHGHTNYVFCVNFNPQSNMIVSGSFDETVRIWDVKSGKCLKVLPAHSDPVTAVDFNREGSLIVSSSYDGLCRIWDAGTGHCIKTLIDDENPPVSFVKFSPNGKFILVGTLDNNLRLWNFSTGKFLKTYTGHVNTKFCISPTFSVTNGKYIVGGSEDSCVYLWELQSRKIVQKLEGHTDTVISVACHPTQNIIASGALGNDKTVKIWTQEI |
Nucleotide Sequence
(Fasta) | GTGGAGTGTC TCTGACTCTG TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCCAGTTCTC 60
CCTCCTGAAG GCCAAATAAA GGCTAAAGGC TAATAAACCC TTAGAAAAGG CAAATGTCAG 120
CCCCAACCGA ATCCTACAAA CCTTACACCC TAACCCAAAC CCTAACAGGC CACAAATCCC 180
CCATATCATC CGTCAAATTC TCCGCCGATG GCCGTCTCCT CGGCTCTTCC TCCGCTGACA 240
AAACCCTCAG AACCTATTCC ATCTCCCTTT CTAATCCTCC TACATCTCCA ATCACTCATC 300
TCCATGACTT CCACGGGCAC GAACAAGGCG TCTCCGACCT CGCCTTCTCC TCTGATTCCC 360
GCTTCATTGT CTCTGCATCC GACGATAAAA CCCTCCGCCT ATGGGACGTC ACAACAGGGC 420
ACACAATCAA AACCCTTCAT GGGCACACCA ATTATGTGTT TTGCGTCAAT TTTAACCCGC 480
AATCGAATAT GATTGTTTCG GGTTCTTTTG ATGAGACTGT TAGAATTTGG GATGTGAAGA 540
GTGGCAAGTG TTTGAAGGTA TTGCCTGCCC ATTCGGATCC AGTCACAGCT GTCGATTTTA 600
ATAGAGAGGG TTCGCTTATT GTATCGAGTA GTTATGATGG ATTGTGTAGA ATTTGGGACG 660
CTGGGACTGG TCATTGTATC AAGACCTTGA TTGATGATGA AAACCCACCT GTTTCCTTCG 720
TCAAGTTTTC GCCTAATGGA AAGTTCATTC TTGTTGGCAC CTTGGATAAC AATTTGAGGC 780
TTTGGAATTT TTCAACTGGG AAATTTCTGA AGACATACAC TGGGCATGTC AATACAAAAT 840
TCTGTATTTC GCCCACCTTT TCCGTAACAA ATGGAAAGTA CATTGTTGGT GGTTCGGAGG 900
ATAGTTGTGT ATACCTGTGG GAGCTTCAAA GCAGGAAAAT AGTGCAGAAA TTGGAAGGTC 960
ACACAGATAC AGTTATATCA GTAGCATGTC ATCCCACCCA AAATATTATT GCATCTGGTG 1020
CACTGGGCAA TGACAAGACC GTGAAGATTT GGACTCAGGA AATATGATTT CTCTGCTAGC 1080
AGTTTTTTTA ACCTGATTTG GCCTGTGCAT AGGAGAAGAC CTTGAGTTAC AAAGAGGGAA 1140
ATATTTTGCT CGATGGCTGA AGCTTCTGCT TTTTCCCAGA CACTTGTCCT CTTTGATATG 1200
CATGTAGTTT TGATTCATTT AACCACTGTT TATGTATCTG AGGAACAAAT TTGATGGAAG 1260
TCGTGTGATC TTTTTTAACT CCCTTGATTC CCATCTCTGT CCCCTTCACG TTTATAACTG 1320
GACCAGTGTG TAGCTTCTGT TTAACTGAGA AGAAAACCAG CAGTCCTTTA TTTATTTATT 1380
TTGACTTAAT ATAAGCACTG CTTTTGTGGA CCATTGCTGT GATTATTATT GAAGGACGAC 1440
GGTAGCCTTA CTACAAGGAT CATGAAAGGA AAGAAAGTTC GGAGGACAGG TAAAAGGAAA 1500
ATGGATGACT TAATGAGAGC CTTGTGAGTG GAGGTCATCC AGCAGGCCTA ATACAGCTAA 1560
TCTTAGGACC CAGCGCCTGT CGATGTAGTC ATCCAATCAA TAAATTTAGC ACTGTCTGGA 1620
AATCCGATAG AAAAGTCATG CCAAGAATAA CTAGAACAAG TCAAGCACAA GAGGTGAGGT 1680
GAGAAAGCCC TGTTATCAAG ATCCACGCCC AAAACAGCAA CAGAAAGAGG TCGGCGTGGG 1740
TGGTCTGTAG GGTGACAATA AGCAGCTAAG AGTAAACGAG GGCTCTGGTC AAGGTCGAGA 1800
GGACCCAGCG CCACCAGGAA TCCTTGTGGG TAGGGAGCAC GTGTTCAAGA GTTCCTAGAT 1860
CATAACTAAT TGCCAAGTAG AAGCAGATGC CATATGTAAC AACAACCCTT ATTCAAATCT 1920
AAGAAAATAG GTGACATAGC CCTTTTATAC ACACACACAC ACACACACAC ACACACATAC 1980
ACATACATAC AATGTATCAG ATTATTGAAG AATATTAATT GTTCATTATG AAACAAGGAG 2040
AAAGAGGGTA ACATTTTTAT GTCTAGAAAG AGCCCAGATT GATTACAAAA GACAAGGAAA 2100
TGATCGATTA TAACAACAAG AGTTTACGTA AATGATTAGA GATTCACATC TACTCAGAGT 2160
AGGAGTATTC AATAGAATAA ATTGATATTT ACATGTTAAG TTAGAATTCA TGTAATTACT 2220
AGAAATAAGA CATGTAATAA ATTAGAATTT AGTTTGTATT ATGATTCGTT ATGTAATTTC 2280
CTCATTTGAG TAGAAAAGTA TGTATAATAA TAGATTTAGA AGTTTATATG AAACTAACAA 2340
TATACGAATA TAAATAGATC ATTTAGAGCT GAATAAGATA GACAGTAATA TATATACAAT 2400
TTTTTTAATG CAATTTATAG C
2422Nucleotide Fasta Sequence
>POPTR_0005s19230.1|WD40|Populus trichocarpa
GTGGAGTGTCTCTGACTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAGTTCTCCCTCCTGAAGGCCAAATAAAGGCTAAAGGCTAATAAACCCTTAGAAAAGGCAAATGTCAGCCCCAACCGAATCCTACAAACCTTACACCCTAACCCAAACCCTAACAGGCCACAAATCCCCCATATCATCCGTCAAATTCTCCGCCGATGGCCGTCTCCTCGGCTCTTCCTCCGCTGACAAAACCCTCAGAACCTATTCCATCTCCCTTTCTAATCCTCCTACATCTCCAATCACTCATCTCCATGACTTCCACGGGCACGAACAAGGCGTCTCCGACCTCGCCTTCTCCTCTGATTCCCGCTTCATTGTCTCTGCATCCGACGATAAAACCCTCCGCCTATGGGACGTCACAACAGGGCACACAATCAAAACCCTTCATGGGCACACCAATTATGTGTTTTGCGTCAATTTTAACCCGCAATCGAATATGATTGTTTCGGGTTCTTTTGATGAGACTGTTAGAATTTGGGATGTGAAGAGTGGCAAGTGTTTGAAGGTATTGCCTGCCCATTCGGATCCAGTCACAGCTGTCGATTTTAATAGAGAGGGTTCGCTTATTGTATCGAGTAGTTATGATGGATTGTGTAGAATTTGGGACGCTGGGACTGGTCATTGTATCAAGACCTTGATTGATGATGAAAACCCACCTGTTTCCTTCGTCAAGTTTTCGCCTAATGGAAAGTTCATTCTTGTTGGCACCTTGGATAACAATTTGAGGCTTTGGAATTTTTCAACTGGGAAATTTCTGAAGACATACACTGGGCATGTCAATACAAAATTCTGTATTTCGCCCACCTTTTCCGTAACAAATGGAAAGTACATTGTTGGTGGTTCGGAGGATAGTTGTGTATACCTGTGGGAGCTTCAAAGCAGGAAAATAGTGCAGAAATTGGAAGGTCACACAGATACAGTTATATCAGTAGCATGTCATCCCACCCAAAATATTATTGCATCTGGTGCACTGGGCAATGACAAGACCGTGAAGATTTGGACTCAGGAAATATGATTTCTCTGCTAGCAGTTTTTTTAACCTGATTTGGCCTGTGCATAGGAGAAGACCTTGAGTTACAAAGAGGGAAATATTTTGCTCGATGGCTGAAGCTTCTGCTTTTTCCCAGACACTTGTCCTCTTTGATATGCATGTAGTTTTGATTCATTTAACCACTGTTTATGTATCTGAGGAACAAATTTGATGGAAGTCGTGTGATCTTTTTTAACTCCCTTGATTCCCATCTCTGTCCCCTTCACGTTTATAACTGGACCAGTGTGTAGCTTCTGTTTAACTGAGAAGAAAACCAGCAGTCCTTTATTTATTTATTTTGACTTAATATAAGCACTGCTTTTGTGGACCATTGCTGTGATTATTATTGAAGGACGACGGTAGCCTTACTACAAGGATCATGAAAGGAAAGAAAGTTCGGAGGACAGGTAAAAGGAAAATGGATGACTTAATGAGAGCCTTGTGAGTGGAGGTCATCCAGCAGGCCTAATACAGCTAATCTTAGGACCCAGCGCCTGTCGATGTAGTCATCCAATCAATAAATTTAGCACTGTCTGGAAATCCGATAGAAAAGTCATGCCAAGAATAACTAGAACAAGTCAAGCACAAGAGGTGAGGTGAGAAAGCCCTGTTATCAAGATCCACGCCCAAAACAGCAACAGAAAGAGGTCGGCGTGGGTGGTCTGTAGGGTGACAATAAGCAGCTAAGAGTAAACGAGGGCTCTGGTCAAGGTCGAGAGGACCCAGCGCCACCAGGAATCCTTGTGGGTAGGGAGCACGTGTTCAAGAGTTCCTAGATCATAACTAATTGCCAAGTAGAAGCAGATGCCATATGTAACAACAACCCTTATTCAAATCTAAGAAAATAGGTGACATAGCCCTTTTATACACACACACACACACACACACACACACATACACATACATACAATGTATCAGATTATTGAAGAATATTAATTGTTCATTATGAAACAAGGAGAAAGAGGGTAACATTTTTATGTCTAGAAAGAGCCCAGATTGATTACAAAAGACAAGGAAATGATCGATTATAACAACAAGAGTTTACGTAAATGATTAGAGATTCACATCTACTCAGAGTAGGAGTATTCAATAGAATAAATTGATATTTACATGTTAAGTTAGAATTCATGTAATTACTAGAAATAAGACATGTAATAAATTAGAATTTAGTTTGTATTATGATTCGTTATGTAATTTCCTCATTTGAGTAGAAAAGTATGTATAATAATAGATTTAGAAGTTTATATGAAACTAACAATATACGAATATAAATAGATCATTTAGAGCTGAATAAGATAGACAGTAATATATATACAATTTTTTTAATGCAATTTATAGC
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
