WERAM Information

Tag Content
WERAM ID WERAM-Pot-0063
Ensembl Protein ID POPTR_0005s09360.1
Gene Name POPTR_0005s09360g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0005s09360 POPTR_0005s09360.1 POPTR_0005s09360.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 6.50e-75 252.5 831 1057
Organism Populus trichocarpa
Domain Profile
  HDM JHDM2
           JHDM2.txt    2 Yc.krdgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy............vgilkkkwaeedlkell 77  
                          Y+ +r g+lNLa++lp+n+++pd+gPk+y AyG  +e +r++++t+lh+d+sdavn+l++            +  lk k+ e+d++el 
  POPTR_0005s09360.1  831 YThPRSGPLNLAVRLPENSLKPDMGPKTYIAYGYPEELGRGDSVTKLHCDMSDAVNVLTHtadvsnkthyteIQKLKLKHFEQDQRELF 919 
                          652479*********************************************************************************** PP
           JHDM2.txt   78 ksieeeeldevtrkrvqdpkekpgalWhifaakdaekirellekvskeqga....evppdhdpihdqswyldrklrkrLfeeyGvegwt 162 
                           + ++++ ++   +  +    + ga+W+if+++d++k++e+l+k+ ke+++    + p++++pihdq+++ + +++++L+eeyG+e+wt
  POPTR_0005s09360.1  920 GNNQNDGPLKCGDESEWMDALDGGAVWDIFRREDVPKLQEYLNKHFKEFRHihcsPLPKVVHPIHDQTFFFTLEHKRKLKEEYGIEPWT 1008
                          ******9999999999999999****************************999999999****************************** PP
           JHDM2.txt  163 lvQklgdavlipagapHqvqnlkscvkvaedFvsPEnvkecfrltkeyr 211 
                          +vQklgdav+ipag+pHqv+nlksc+kva dFvsPEnv ec+rlt+e+r
  POPTR_0005s09360.1 1009 FVQKLGDAVFIPAGCPHQVRNLKSCIKVAMDFVSPENVGECIRLTEEFR 1057
                          ***********************************************98 PP
Protein Sequence
(Fasta)		MARVRKRQKP AQSEAGLVEE AVENGGSEEG VKENGGLDQS SEIGEGKVEE SRDIDKGNGA 60
SKMGNRKRKV KKSEIGAVEE EREGNGVEKG EEGDLKEDVR RGRKKKKGKK KESDREEEKV 120
KEENVEDDEK GVSSAVEGKK RVDFVGNEGE KEVESGDEDG LGEKSEVDFV KKEERGVDGK 180
MDGKSRKAKQ EVDAEEGEKE VENGKEGKLD GRREEKGAEK RGREGGKFSV DNEERKEIGE 240
LGVGGKEKVR FVKNEEESEG VKESEGAVAR ENKGGKKESE SGNEEVESEV GKENGGDVEE 300
NGDSLNKRPR RTDKKVNYAE LDAALDEAVL GEKRRKRRKK NGVSESDGLE SVQNSKNGDV 360
NRGKKKVSRK GKKNQEEENI EGEEEKEESG EGDCLMMSSE TGYGLRTRKE QVDQGSKSRR 420
DNEFIENVCL MCHQCQRNDK GRVVRCLKCK RKRYCIPCLT KWYPKMTEDE IANACPVCLG 480
NCNCKSCLRL DAPIKVLSKE EVVRYSKFFL RALLPFLKQL DEEQMMEREI EARREGVPLA 540
GLQIENAECP ADERMFCDNC RTSIFDYHRS CSNCSSDLCL ACCREIRAGH LQGGGPDTES 600
KDFMGPKSGW KANEDGSIHC ACDSGNLELK CLFPNKKVNF AVSVSELVKK VEEMSKKWET 660
DSANAPDERC ACFNSNGDLD ISNGNRLLKA ACREDSDDNY LFYPIAEDIT EDDLKHFQFH 720
WKRAEPVIVR NVLETASGLS WEPMVMWRAF RQIKNEKHDT LLDVKAIECL DYCEVNINVH 780
QFFIGYTEGR FDGKNWPQIL KLKDWPPSKT FGESLPRHDA EFTCCLPFKE YTHPRSGPLN 840
LAVRLPENSL KPDMGPKTYI AYGYPEELGR GDSVTKLHCD MSDAVNVLTH TADVSNKTHY 900
TEIQKLKLKH FEQDQRELFG NNQNDGPLKC GDESEWMDAL DGGAVWDIFR REDVPKLQEY 960
LNKHFKEFRH IHCSPLPKVV HPIHDQTFFF TLEHKRKLKE EYGIEPWTFV QKLGDAVFIP 1020
AGCPHQVRNL KSCIKVAMDF VSPENVGECI RLTEEFRLLP PNHRAKEDKL EVFLIFTFMS 1080
I 1081
Nucleotide Sequence
(Fasta)		AAAACAAAAA TGCTTAAAAA AAATCCCAGT TTCTCTTTAT AAAAGGAAAA CAGACCCTTC 60
TTGTCCAACC ACTGTAAAAA TAAAACCGAA AAAGTCTCCT TTTATCCTCT GCTAATAAAA 120
GCTTCAACCT TTTGTGATGG CGAGAGTGAG GAAGCGGCAG AAACCGGCGC AATCGGAGGC 180
GGGGTTGGTG GAGGAAGCGG TGGAGAATGG CGGGTCAGAG GAGGGGGTTA AGGAGAATGG 240
GGGGTTAGAT CAAAGTAGTG AAATTGGTGA AGGGAAAGTA GAGGAAAGTC GTGATATTGA 300
TAAAGGAAAC GGGGCCTCGA AGATGGGAAA TAGGAAGAGG AAGGTAAAGA AGAGTGAGAT 360
TGGAGCTGTT GAAGAGGAAA GGGAAGGTAA TGGTGTGGAG AAAGGGGAAG AAGGTGATTT 420
GAAGGAGGAT GTCAGAAGGG GTAGGAAAAA AAAGAAGGGA AAGAAGAAAG AAAGTGATCG 480
TGAGGAGGAG AAGGTGAAAG AAGAGAATGT GGAGGATGAT GAAAAGGGGG TTTCTTCAGC 540
TGTGGAGGGG AAGAAAAGGG TGGACTTTGT TGGGAATGAA GGAGAGAAAG AGGTGGAGAG 600
TGGGGACGAA GATGGATTAG GTGAGAAAAG TGAAGTGGAT TTCGTCAAGA AGGAAGAGAG 660
AGGGGTTGAT GGAAAGATGG ATGGGAAGTC TAGGAAGGCA AAACAGGAGG TGGATGCCGA 720
AGAAGGAGAG AAAGAGGTAG AAAATGGTAA AGAAGGAAAA TTGGACGGGA GAAGGGAAGA 780
GAAAGGGGCA GAGAAGAGGG GGCGGGAGGG AGGTAAATTC AGTGTGGATA ACGAGGAAAG 840
GAAAGAGATT GGAGAACTGG GTGTTGGAGG AAAGGAGAAG GTGAGATTTG TTAAGAATGA 900
GGAAGAAAGC GAGGGGGTTA AGGAAAGTGA AGGGGCTGTT GCTAGAGAGA ATAAGGGCGG 960
GAAGAAGGAA AGTGAATCGG GTAATGAGGA GGTGGAGAGC GAGGTAGGGA AGGAGAATGG 1020
TGGTGATGTG GAAGAGAATG GCGATTCATT AAATAAGAGG CCGAGGAGAA CTGATAAAAA 1080
GGTAAACTAT GCTGAGCTTG ATGCTGCATT AGATGAGGCA GTGCTTGGGG AGAAGCGCAG 1140
GAAGAGGAGG AAGAAGAATG GAGTCTCAGA GAGTGATGGA TTGGAAAGTG TGCAAAATAG 1200
TAAAAATGGT GATGTCAATC GTGGAAAAAA GAAAGTTAGT CGAAAAGGAA AAAAGAATCA 1260
GGAGGAGGAG AATATCGAGG GAGAAGAAGA GAAGGAAGAG AGTGGCGAAG GAGATTGTTT 1320
GATGATGAGC TCTGAAACAG GTTATGGGCT CAGGACTCGG AAAGAGCAAG TGGATCAGGG 1380
AAGCAAATCC AGGCGTGATA ATGAGTTTAT TGAGAATGTG TGTTTAATGT GTCATCAATG 1440
CCAGAGAAAT GACAAGGGCC GTGTTGTTCG GTGTCTGAAA TGTAAAAGGA AGCGCTATTG 1500
CATACCATGC TTGACGAAAT GGTATCCTAA GATGACAGAG GATGAAATTG CCAATGCTTG 1560
TCCTGTCTGT CTTGGAAATT GCAACTGTAA ATCTTGTTTG CGTCTGGATG CGCCGATTAA 1620
GGTATTAAGC AAAGAAGAAG TAGTGCGATA CTCTAAGTTT TTCCTTCGTG CGCTTCTTCC 1680
ATTTTTGAAG CAGTTAGATG AAGAACAAAT GATGGAGAGA GAGATTGAGG CCAGGAGAGA 1740
AGGTGTACCA CTTGCAGGCT TACAAATAGA GAATGCTGAA TGCCCTGCAG ATGAGCGCAT 1800
GTTCTGTGAT AATTGCAGAA CTTCTATTTT TGATTATCAC AGAAGTTGCT CAAATTGCTC 1860
TTCTGATCTT TGTCTTGCCT GTTGTCGGGA GATCCGTGCT GGGCACTTGC AAGGTGGTGG 1920
GCCAGATACT GAATCTAAGG ATTTTATGGG GCCAAAGTCT GGATGGAAAG CAAATGAAGA 1980
TGGAAGCATT CATTGTGCTT GTGATAGTGG CAATTTGGAA CTAAAATGTT TGTTCCCAAA 2040
CAAAAAAGTC AATTTTGCAG TTTCAGTGTC AGAGTTGGTA AAGAAAGTTG AAGAAATGTC 2100
CAAAAAATGG GAAACTGACT CTGCTAATGC TCCTGATGAA CGATGTGCTT GTTTTAACTC 2160
CAATGGTGAT CTTGATATCA GTAATGGTAA CAGGTTATTA AAAGCAGCAT GCCGAGAAGA 2220
TTCTGATGAT AACTATTTAT TCTATCCAAT AGCCGAAGAT ATCACAGAGG ATGATTTGAA 2280
GCATTTTCAG TTTCATTGGA AGAGAGCTGA GCCTGTGATT GTTCGCAATG TGCTTGAAAC 2340
TGCATCTGGT TTGAGTTGGG AGCCAATGGT CATGTGGCGT GCCTTCCGCC AGATCAAAAA 2400
TGAAAAACAC GACACACTAT TGGATGTAAA GGCAATTGAG TGTCTGGATT ACTGTGAGGT 2460
CAATATTAAT GTCCATCAAT TCTTCATTGG TTACACAGAG GGAAGGTTTG ATGGTAAAAA 2520
TTGGCCTCAG ATACTGAAGC TGAAAGACTG GCCCCCATCT AAAACATTTG GTGAAAGTCT 2580
TCCACGACAT GATGCTGAAT TTACCTGTTG TTTGCCCTTT AAGGAGTATA CACATCCACG 2640
CAGTGGACCT TTAAACCTTG CTGTCAGATT GCCTGAGAAT TCTTTGAAGC CAGATATGGG 2700
GCCAAAGACA TATATTGCCT ATGGATATCC TGAAGAGCTT GGGCGTGGAG ATTCGGTCAC 2760
TAAGCTTCAC TGTGACATGT CTGATGCGGT AAATGTCTTG ACGCATACTG CTGATGTGTC 2820
CAATAAAACT CATTATACTG AAATACAAAA GTTGAAGCTA AAGCACTTTG AACAAGACCA 2880
AAGAGAGCTT TTTGGAAATA ATCAGAATGA TGGACCTTTA AAGTGTGGAG ATGAGTCAGA 2940
ATGGATGGAT GCTTTAGATG GAGGTGCTGT TTGGGACATT TTCCGAAGAG AAGATGTTCC 3000
TAAGTTGCAG GAGTATCTCA ACAAGCACTT CAAGGAATTT AGGCATATCC ACTGTAGCCC 3060
ATTACCAAAG GTGGTTCACC CCATTCATGA CCAGACATTT TTTTTTACTC TAGAGCACAA 3120
GAGGAAGCTA AAAGAGGAAT ATGGCATTGA ACCATGGACA TTTGTCCAGA AACTTGGAGA 3180
CGCTGTCTTC ATTCCTGCAG GCTGTCCTCA TCAAGTGAGA AACTTGAAGT CTTGCATTAA 3240
GGTAGCAATG GACTTTGTCT CACCTGAAAA TGTAGGTGAG TGCATACGTC TGACAGAGGA 3300
ATTCCGTTTG CTTCCTCCAA ATCATCGGGC TAAAGAGGAC AAGTTGGAGG TATTTCTAAT 3360
TTTTACTTTC ATGTCTATAT AA 3383
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0088 EOY14163 Theobroma cacao 58 0.0 798
WERAM-Met-0036 AES62955 Medicago truncatula 57 0.0 791
WERAM-Bro-0103 Bo5g141320.1 Brassica oleracea 54 0.0 742
WERAM-Brr-0149 Bra029664.1-P Brassica rapa 55 0.0 738
WERAM-Viv-0065 VIT_10s0042g00830.t01 Vitis vinifera 53 0.0 729
WERAM-Glm-0118 GLYMA10G43080.2 Glycine max 50 0.0 719
WERAM-Arl-0040 fgenesh1_pm.C_scaffold_8000499 Arabidopsis lyrata 52 0.0 701
WERAM-Zem-0137 GRMZM2G417089_P01 Zea mays 49 0.0 672
WERAM-Sob-0006 Sb01g015210.1 Sorghum bicolor 49 0.0 668
WERAM-Sol-0031 Solyc02g082400.2.1 Solanum lycopersicum 51 0.0 657
WERAM-Sei-0128 Si034182m Setaria italica 49 0.0 655
WERAM-Sot-0046 PGSC0003DMT400042379 Solanum tuberosum 50 5e-179 625
WERAM-Art-0009 AT1G11950.1 Arabidopsis thaliana 49 5e-178 622
WERAM-Orgl-0039 OGLUM03G23040.1 Oryza glumaepatula 48 2e-172 604
WERAM-Prp-0037 EMJ15852 Prunus persica 49 4e-172 603
WERAM-Orl-0076 KN539615.1_FGP001 Oryza longistaminata 47 2e-171 600
WERAM-Tra-0176 Traes_5AL_C9FC195D1.2 Triticum aestivum 48 1e-160 565
WERAM-Aet-0048 EMT13865 Aegilops tauschii 48 9e-159 558
WERAM-Ori-0112 BGIOSGA030706-PA Oryza indica 48 2e-152 537
WERAM-Orr-0107 ORUFI09G09860.1 Oryza rufipogon 47 3e-152 536
WERAM-Orm-0040 OMERI03G20080.1 Oryza meridionalis 44 7e-149 526
WERAM-Lep-0100 LPERR09G06290.1 Leersia perrieri 43 2e-145 514
WERAM-Mua-0058 GSMUA_Achr3P14190_001 Musa acuminata 52 5e-144 509
WERAM-Brd-0103 BRADI4G27417.1 Brachypodium distachyon 50 1e-139 495
WERAM-Tru-0042 TRIUR3_19853-P1 Triticum urartu 48 4e-138 490
WERAM-Orbr-0035 OB02G45020.1 Oryza brachyantha 48 7e-138 489
WERAM-Ors-0026 OS02T0828900-01 Oryza sativa 47 8e-138 489
WERAM-Org-0029 ORGLA02G0333900.1 Oryza glaberrima 47 2e-135 481
WERAM-Amt-0041 ERN17369 Amborella trichopoda 48 2e-133 474
WERAM-Orp-0097 OPUNC09G07740.1 Oryza punctata 44 7e-133 472
WERAM-Orb-0104 OBART09G09130.1 Oryza barthii 44 5e-132 469
WERAM-Orni-0101 ONIVA09G08110.1 Oryza nivara 45 1e-130 465
WERAM-Hov-0012 MLOC_12624.1 Hordeum vulgare 47 2e-127 454
WERAM-Php-0101 PP1S444_19V6.1 Physcomitrella patens 47 1e-126 452
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 38 1e-57 223
WERAM-Sus-0108 ENSSSCP00000015245.2 Sus scrofa 39 2e-55 216
WERAM-Orn-0157 ENSONIP00000016309.1 Oreochromis niloticus 38 2e-55 215
WERAM-Orc-0080 ENSOCUP00000007280.2 Oryctolagus cuniculus 39 3e-55 214
WERAM-Fec-0021 ENSFCAP00000001589.3 Felis catus 39 3e-55 214
WERAM-Caf-0016 ENSCAFP00000001774.3 Canis familiaris 39 3e-55 214
WERAM-Aim-0189 ENSAMEP00000017468.1 Ailuropoda melanoleuca 39 3e-55 214
WERAM-Ova-0174 ENSOARP00000017606.1 Ovis aries 39 3e-55 214
WERAM-Mup-0101 ENSMPUP00000009333.1 Mustela putorius furo 39 3e-55 214
WERAM-Bot-0099 ENSBTAP00000013278.4 Bos taurus 39 3e-55 214
WERAM-Pat-0141 ENSPTRP00000029560.2 Pan troglodytes 39 4e-55 214
WERAM-Gog-0012 ENSGGOP00000000822.2 Gorilla gorilla 39 4e-55 214
WERAM-Orla-0053 ENSORLP00000006841.1 Oryzias latipes 38 4e-55 214
WERAM-Hos-0102 ENSP00000326563.5 Homo sapiens 39 4e-55 214
WERAM-Loa-0020 ENSLAFP00000001269.3 Loxodonta africana 39 4e-55 214
WERAM-Dan-0091 ENSDNOP00000009144.3 Dasypus novemcinctus 39 4e-55 214
WERAM-Nol-0092 ENSNLEP00000010895.1 Nomascus leucogenys 39 4e-55 214
WERAM-Otg-0093 ENSOGAP00000008081.2 Otolemur garnettii 39 4e-55 214
WERAM-Ptv-0087 ENSPVAP00000007885.1 Pteropus vampyrus 39 4e-55 214
WERAM-Eqc-0143 ENSECAP00000015928.1 Equus caballus 39 4e-55 214
WERAM-Leo-0085 ENSLOCP00000011676.1 Lepisosteus oculatus 38 4e-55 214
WERAM-Myl-0184 ENSMLUP00000015336.2 Myotis lucifugus 39 4e-55 214
WERAM-Mim-0018 ENSMICP00000001555.1 Microcebus murinus 39 5e-55 214
WERAM-Poa-0141 ENSPPYP00000017696.1 Pongo abelii 39 5e-55 214
WERAM-Mam-0003 ENSMMUP00000000618.2 Macaca mulatta 39 5e-55 214
WERAM-Ten-0123 ENSTNIP00000013426.1 Tetraodon nigroviridis 37 6e-55 214
WERAM-Cap-0028 ENSCPOP00000002138.2 Cavia porcellus 39 6e-55 214
WERAM-Mum-0157 ENSMUSP00000037628.7 Mus musculus 39 6e-55 213
WERAM-Chs-0157 ENSCSAP00000009298.1 Chlorocebus sabaeus 39 6e-55 213
WERAM-Paa-0043 ENSPANP00000002578.1 Papio anubis 39 9e-55 213
WERAM-Asm-0165 ENSAMXP00000016507.1 Astyanax mexicanus 38 1e-54 213
WERAM-Mod-0100 ENSMODP00000015209.4 Monodelphis domestica 39 1e-54 212
WERAM-Ran-0218 ENSRNOP00000067649.2 Rattus norvegicus 39 1e-54 212
WERAM-Sah-0129 ENSSHAP00000013821.1 Sarcophilus harrisii 39 2e-54 212
WERAM-Gaa-0189 ENSGACP00000023958.1 Gasterosteus aculeatus 37 2e-54 212
WERAM-Caj-0074 ENSCJAP00000012191.1 Callithrix jacchus 39 2e-54 212
WERAM-Xet-0043 ENSXETP00000014664.3 Xenopus tropicalis 38 2e-54 212
WERAM-Gam-0008 ENSGMOP00000000972.1 Gadus morhua 37 2e-54 211
WERAM-Anc-0075 ENSACAP00000007027.2 Anolis carolinensis 38 4e-54 211
WERAM-Anp-0111 ENSAPLP00000012780.1 Anas platyrhynchos 38 4e-54 211
WERAM-Meg-0102 ENSMGAP00000010078.1 Meleagris gallopavo 38 4e-54 211
WERAM-Fia-0049 ENSFALP00000003539.1 Ficedula albicollis 38 5e-54 211
WERAM-Gaga-0080 ENSGALP00000012399.4 Gallus gallus 38 5e-54 211
Created Date 25-Jun-2016