WERAM Information

Tag Content
WERAM ID WERAM-Pot-0061
Ensembl Protein ID POPTR_0005s06930.1
Gene Name POPTR_0005s06930g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0005s06930 POPTR_0005s06930.1 POPTR_0005s06930.1
POPTR_0005s06930 POPTR_0005s06930.2 POPTR_0005s06930.2
POPTR_0005s06930 POPTR_0005s06930.3 POPTR_0005s06930.3
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC SIR2 5.00e-71 240.2 98 378
Organism Populus trichocarpa
Domain Profile
  HDAC SIR2
            SIR2.txt   3 lakllkkskkivvltGAGiStsaGIPDFRsseGlysklkkeelpspeaifdldffrkdpkv..fyalakelyp.lgsakPtktHyflaele 90 
                         l++++ +s k+vvltGAGiSt++GIPD+Rs++G ys+        +++i++++f+r+++++  ++a++++ ++ +++a+P+++H +la+le
  POPTR_0005s06930.1  98 LYQFFDRSTKLVVLTGAGISTECGIPDYRSPNGAYSS-------GFRPITHQEFVRSSRTRrrYWARSYAGWRrFHAAEPSAAHFALASLE 181
                         578999******************************9.......5899********9998889**************************** PP
            SIR2.txt  91 kkgkllrlytQNiDgLerkaglkedklvelHGslatasCtkCkkefpreeikeklkak................................. 148
                         k+g++ +++tQN+D+L+++ag++    +e+HG+++ ++C++C+ +fpr+ ++++lka                                  
  POPTR_0005s06930.1 182 KAGRIDFMITQNVDRLHHRAGSN---PLEIHGTVYSVTCLDCNFSFPRSSFQDQLKALnpkwaeaiesldngspgseksfgmkqrpdgdie 269
                         **********************6...9******************************9********************************* PP
            SIR2.txt 149 .........ekvpkCekCkgvlkpdivffgenlpeefleeveedlkeadlllvlGtSlkvepvaslvkkavkkkvpvllvnleevkadkla 230
                                   ++p C+kC+gvlkpd+vffg+n+p++++++++ ++k +d++lvlG+Sl+ +++++lv++a+++++ +++vnl+ ++ad+++
  POPTR_0005s06930.1 270 idekfweadYHIPACPKCNGVLKPDVVFFGDNVPKDRADKAMDAAKGCDAFLVLGSSLMTMSAFRLVRAAHEAGAATAIVNLGVTRADDIV 360
                         ********999******************************************************************************** PP
            SIR2.txt 231 dlkllgdcdevveellkl 248
                          lk++++++e++ ++l+ 
  POPTR_0005s06930.1 361 PLKINARLGEILPRVLNI 378
                         ************999765 PP
Protein Sequence
(Fasta)		MLLHTHFFQT LRTARRVLGN VMKDSVQLSN KNCMPLRRGK RVVSFQGSAV RFVQTSYRIS 60
LPAGNAFGNQ EKVSSKILKD KKTVPDSDPP SDRDVDLLYQ FFDRSTKLVV LTGAGISTEC 120
GIPDYRSPNG AYSSGFRPIT HQEFVRSSRT RRRYWARSYA GWRRFHAAEP SAAHFALASL 180
EKAGRIDFMI TQNVDRLHHR AGSNPLEIHG TVYSVTCLDC NFSFPRSSFQ DQLKALNPKW 240
AEAIESLDNG SPGSEKSFGM KQRPDGDIEI DEKFWEADYH IPACPKCNGV LKPDVVFFGD 300
NVPKDRADKA MDAAKGCDAF LVLGSSLMTM SAFRLVRAAH EAGAATAIVN LGVTRADDIV 360
PLKINARLGE ILPRVLNIGS LSIPALS 387
Nucleotide Sequence
(Fasta)		GAACACAAGT TACAAATAGA CAAAAACTTT TAAGACAACA TAACCACAAC ATCAACCTCC 60
AGTACCGGAG CTTCCAATGC TAAGACCAAC CACATAAATA CCCTCCAAGA CCAAGAATTT 120
CTCTTGCAAA TAAAAAAAAA AAATAGACCA AACTAGTTTT CTTACACAAT CACCATGCTT 180
TTGCACACAC ACTTCTTTCA GACTTTAAGA ACTGCAAGAA GGGTTCTTGG AAATGTAATG 240
AAAGATTCTG TTCAATTGAG CAACAAGAAT TGTATGCCAT TGAGAAGAGG CAAAAGGGTT 300
GTTTCTTTTC AAGGCTCTGC TGTAAGATTT GTACAAACAT CATACCGTAT TTCACTGCCT 360
GCTGGGAACG CATTTGGAAA CCAAGAAAAA GTCTCTTCAA AAATTTTGAA AGACAAGAAG 420
ACAGTTCCTG ATTCAGATCC TCCAAGTGAT AGAGATGTTG ATCTTTTGTA CCAGTTTTTT 480
GATCGAAGCA CCAAATTGGT GGTTTTGACT GGAGCTGGGA TTAGTACAGA ATGTGGAATT 540
CCTGATTATA GAAGTCCAAA TGGAGCCTAC AGTTCTGGTT TCAGACCTAT TACCCATCAG 600
GAGTTTGTCC GTTCAAGTCG AACACGTAGG CGATATTGGG CTAGGAGCTA TGCTGGATGG 660
AGACGGTTTC ATGCTGCAGA ACCTAGTGCA GCCCATTTTG CTTTGGCATC TTTAGAAAAA 720
GCTGGGCGGA TTGATTTTAT GATTACACAA AATGTTGATA GACTGCACCA TCGTGCTGGG 780
AGCAACCCAC TTGAAATACA TGGAACTGTA TACTCTGTGA CTTGTCTAGA TTGCAACTTT 840
TCCTTTCCGC GGAGTTCATT TCAAGATCAA CTGAAGGCCC TCAATCCAAA GTGGGCAGAA 900
GCAATTGAAA GTTTGGATAA TGGAAGTCCT GGATCGGAGA AGAGCTTTGG CATGAAGCAA 960
AGGCCTGATG GTGATATTGA GATTGATGAG AAATTCTGGG AGGCGGATTA CCACATACCT 1020
GCATGCCCAA AATGCAATGG AGTGCTCAAA CCTGATGTTG TTTTCTTCGG CGATAATGTC 1080
CCCAAGGATA GAGCAGACAA GGCAATGGAC GCTGCAAAAG GTTGTGATGC TTTCCTTGTA 1140
CTAGGATCAT CTCTAATGAC CATGTCTGCT TTTAGACTTG TCAGAGCTGC TCACGAGGCA 1200
GGTGCTGCTA CAGCAATTGT AAATTTAGGT GTGACGCGAG CTGATGATAT CGTGCCTTTA 1260
AAGATAAATG CCCGATTAGG AGAGATATTG CCTAGAGTAC TGAACATTGG ATCCCTCAGC 1320
ATCCCTGCTC TCTCCTGATG ATACGAGAAA GAGGTGGGGA TTGAAATGAA GAGGGGCTAT 1380
GAGCCTTCAA GTTCTATTTA AACGTCATGA TAGTTTTTTC GTTGGCATCG CTGCGCCATC 1440
CTATAGAATG ACTAGCGGAA CTTGTTGATC AAGAGTCCCC TTGAGATTCT GAGGGCATAT 1500
CTAGCTCAGG ATTTCACCAA TGTGAGTATC ATATAATTGT GCACGATACA TTTGTTTGGA 1560
GGCAACTTCA AGATGCCATC AAGCAAGCAA AGAATGGTGT ATACCATTAA CATTTCAATC 1620
GGTTTGTGGT CTTTCCAGTA AATTTATTAA TTTTGTTTGC TGTATTGGGT ATAAAATCCT 1680
GTTCATGTTG TAACGTTTAA GGTGTATATG TATGGTGGAT GACATGTTGA TTTATTTGAT 1740
GGAAAAGGAT TCCAATGAAC AATAATGGCT AATGTGTGAG CAGCTAATTC CCAGCAC 1798
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0008 EOX92647 Theobroma cacao 75 2e-144 509
WERAM-Prp-0069 EMJ12669 Prunus persica 79 9e-141 497
WERAM-Glm-0041 GLYMA04G38730.1 Glycine max 77 4e-140 494
WERAM-Art-0118 AT5G09230.7 Arabidopsis thaliana 72 6e-138 488
WERAM-Bro-0024 Bo2g009270.1 Brassica oleracea 75 1e-137 486
WERAM-Brr-0142 Bra028643.1-P Brassica rapa 74 6e-137 484
WERAM-Arl-0027 fgenesh1_pg.C_scaffold_6000741 Arabidopsis lyrata 74 2e-135 479
WERAM-Viv-0046 VIT_07s0031g02510.t01 Vitis vinifera 73 6e-135 478
WERAM-Met-0074 AES72910 Medicago truncatula 73 9e-134 474
WERAM-Sol-0062 Solyc04g009430.2.1 Solanum lycopersicum 75 2e-124 442
WERAM-Sot-0097 PGSC0003DMT400082473 Solanum tuberosum 74 4e-122 435
WERAM-Amt-0023 ERN08785 Amborella trichopoda 73 2e-116 416
WERAM-Sei-0033 Si009965m Setaria italica 71 1e-115 414
WERAM-Mua-0095 GSMUA_Achr6P25880_001 Musa acuminata 75 3e-115 412
WERAM-Sob-0114 Sb08g004900.1 Sorghum bicolor 70 4e-115 412
WERAM-Orp-0109 OPUNC12G04720.1 Oryza punctata 71 6e-115 411
WERAM-Orm-0102 OMERI12G03010.1 Oryza meridionalis 71 1e-114 410
WERAM-Ors-0107 OS12T0179800-01 Oryza sativa 71 1e-114 410
WERAM-Orr-0119 ORUFI12G05460.1 Oryza rufipogon 71 2e-114 409
WERAM-Ori-0126 BGIOSGA036526-PA Oryza indica 71 3e-114 409
WERAM-Orbr-0122 OB12G14620.1 Oryza brachyantha 71 5e-114 408
WERAM-Orl-0007 KN538685.1_FGP039 Oryza longistaminata 71 6e-114 408
WERAM-Brd-0118 BRADI4G41127.1 Brachypodium distachyon 71 1e-113 407
WERAM-Lep-0113 LPERR12G04350.1 Leersia perrieri 71 1e-113 407
WERAM-Tra-0230 Traes_5DL_84C49FB59.2 Triticum aestivum 70 7e-113 404
WERAM-Aet-0050 EMT19694 Aegilops tauschii 65 3e-111 399
WERAM-Orni-0118 ONIVA12G04440.1 Oryza nivara 71 3e-109 392
WERAM-Orgl-0114 OGLUM12G05580.1 Oryza glumaepatula 71 3e-109 392
WERAM-Zem-0150 GRMZM5G807054_P01 Zea mays 67 6e-109 391
WERAM-Php-0025 PP1S15_90V6.1 Physcomitrella patens 62 2e-96 349
WERAM-Sem-0008 EFJ20604 Selaginella moellendorffii 59 3e-82 303
WERAM-Chr-0008 EDP00705 Chlamydomonas reinhardtii 49 6e-59 225
WERAM-Lac-0179 ENSLACP00000020887.1 Latimeria chalumnae 44 4e-56 216
WERAM-Pes-0110 ENSPSIP00000013404.1 Pelodiscus sinensis 45 2e-55 214
WERAM-Caj-0096 ENSCJAP00000015889.2 Callithrix jacchus 45 4e-55 213
WERAM-Orc-0113 ENSOCUP00000009744.3 Oryctolagus cuniculus 45 6e-55 212
WERAM-Ict-0083 ENSSTOP00000008774.2 Ictidomys tridecemlineatus 44 8e-55 211
WERAM-Tas-0026 ENSTSYP00000002962.1 Tarsius syrichta 44 1e-54 211
WERAM-Ova-0127 ENSOARP00000012850.1 Ovis aries 43 2e-54 210
WERAM-Paa-0081 ENSPANP00000005490.1 Papio anubis 44 2e-54 209
WERAM-Chs-0026 ENSCSAP00000015768.1 Chlorocebus sabaeus 44 3e-54 209
WERAM-Otg-0098 ENSOGAP00000008496.1 Otolemur garnettii 44 4e-54 209
WERAM-Cap-0138 ENSCPOP00000011117.2 Cavia porcellus 44 8e-54 208
WERAM-Bot-0183 ENSBTAP00000028210.3 Bos taurus 43 1e-53 207
WERAM-Ocp-0148 ENSOPRP00000015399.1 Ochotona princeps 45 3e-53 206
WERAM-Xet-0032 ENSXETP00000009271.1 Xenopus tropicalis 44 3e-53 206
WERAM-Chh-0046 ENSCHOP00000005172.1 Choloepus hoffmanni 43 3e-53 206
WERAM-Gog-0207 ENSGGOP00000025620.1 Gorilla gorilla 44 4e-53 206
WERAM-Mup-0031 ENSMPUP00000003126.1 Mustela putorius furo 43 5e-53 205
WERAM-Poa-0046 ENSPPYP00000005727.2 Pongo abelii 43 6e-53 205
WERAM-Caf-0113 ENSCAFP00000015057.3 Canis familiaris 43 8e-53 205
WERAM-Pat-0044 ENSPTRP00000009383.4 Pan troglodytes 44 9e-53 204
WERAM-Aim-0062 ENSAMEP00000005483.1 Ailuropoda melanoleuca 44 1e-52 204
WERAM-Hos-0046 ENSP00000202967.4 Homo sapiens 44 1e-52 204
WERAM-Sus-0071 ENSSSCP00000010568.2 Sus scrofa 42 2e-52 203
WERAM-Ran-0010 ENSRNOP00000001523.4 Rattus norvegicus 43 4e-52 202
WERAM-Ora-0041 ENSOANP00000006568.2 Ornithorhynchus anatinus 44 4e-52 202
WERAM-Mum-0098 ENSMUSP00000107697.1 Mus musculus 43 4e-52 202
WERAM-Meg-0094 ENSMGAP00000009092.2 Meleagris gallopavo 43 8e-52 201
WERAM-Sah-0071 ENSSHAP00000008646.1 Sarcophilus harrisii 44 8e-52 201
WERAM-Cii-0061 ENSCINP00000027422.2 Ciona intestinalis 44 8e-52 201
WERAM-Tag-0120 ENSTGUP00000009802.1 Taeniopygia guttata 42 9e-52 201
WERAM-Fec-0171 ENSFCAP00000020847.1 Felis catus 44 1e-51 201
WERAM-Fia-0095 ENSFALP00000007922.1 Ficedula albicollis 42 2e-51 200
WERAM-Anp-0117 ENSAPLP00000013436.1 Anas platyrhynchos 44 3e-51 199
WERAM-Gaga-0078 ENSGALP00000011706.4 Gallus gallus 43 4e-51 199
WERAM-Eqc-0095 ENSECAP00000011260.1 Equus caballus 42 7e-51 198
WERAM-Dar-0026 ENSDARP00000027611.6 Danio rerio 42 7e-51 198
WERAM-Asm-0019 ENSAMXP00000002317.1 Astyanax mexicanus 43 7e-51 198
WERAM-Nol-0169 ENSNLEP00000018942.2 Nomascus leucogenys 45 9e-51 198
WERAM-Drm-0032 FBpp0070817 Drosophila melanogaster 44 2e-50 197
WERAM-Loa-0028 ENSLAFP00000001879.2 Loxodonta africana 41 2e-50 196
WERAM-Pem-0012 ENSPMAP00000001780.1 Petromyzon marinus 43 7e-50 195
WERAM-Orla-0208 ENSORLP00000024753.1 Oryzias latipes 41 2e-49 193
WERAM-Pof-0223 ENSPFOP00000018246.2 Poecilia formosa 41 3e-49 192
WERAM-Gam-0012 ENSGMOP00000001231.1 Gadus morhua 42 5e-49 192
WERAM-Xim-0194 ENSXMAP00000015621.1 Xiphophorus maculatus 41 2e-48 190
WERAM-Tar-0187 ENSTRUP00000038866.1 Takifugu rubripes 41 6e-48 188
WERAM-Gaa-0017 ENSGACP00000001945.1 Gasterosteus aculeatus 41 9e-48 188
WERAM-Orn-0178 ENSONIP00000018093.1 Oreochromis niloticus 41 3e-47 186
WERAM-Ptv-0014 ENSPVAP00000002101.1 Pteropus vampyrus 41 1e-46 184
WERAM-Anc-0024 ENSACAP00000002561.3 Anolis carolinensis 43 3e-46 183
WERAM-Ect-0086 ENSETEP00000009903.1 Echinops telfairi 41 6e-46 182
WERAM-Cae-0023 F46G10.7a Caenorhabditis elegans 40 8e-44 175
WERAM-Soa-0051 ENSSARP00000004940.1 Sorex araneus 40 3e-42 170
WERAM-Tub-0044 ENSTBEP00000005291.1 Tupaia belangeri 40 1e-41 167
WERAM-Tut-0072 ENSTTRP00000005343.1 Tursiops truncatus 43 2e-41 167
WERAM-Dan-0155 ENSDNOP00000033669.1 Dasypus novemcinctus 43 6e-40 162
WERAM-Ere-0059 ENSEEUP00000005136.1 Erinaceus europaeus 26 4e-19 93.2
WERAM-Ten-0147 ENSTNIP00000015282.1 Tetraodon nigroviridis 28 1e-18 91.7
WERAM-Org-0043 ORGLA04G0042700.1 Oryza glaberrima 29 2e-18 91.3
WERAM-Myl-0161 ENSMLUP00000013308.2 Myotis lucifugus 26 2e-18 90.5
WERAM-Mam-0185 ENSMMUP00000026241.2 Macaca mulatta 26 5e-18 89.4
WERAM-Mod-0008 ENSMODP00000000983.1 Monodelphis domestica 26 7e-18 89.0
WERAM-Dio-0050 ENSDORP00000004937.1 Dipodomys ordii 27 3e-17 86.7
WERAM-Cis-0081 ENSCSAVP00000017799.1 Ciona savignyi 28 2e-16 84.3
WERAM-Asfu-0001 CADAFUAP00000229 Aspergillus fumigatus 30 6e-16 82.4
WERAM-Cag-0026 CAG62123 Candida glabrata 29 7e-16 82.4
WERAM-Ast-0001 CADATEAP00000292 Aspergillus terreus 28 2e-15 80.9
WERAM-Asg-0028 AAS54472 Ashbya gossypii 30 5e-15 79.7
WERAM-Mae-0123 ENSMEUP00000012391.1 Macropus eugenii 33 1e-14 78.6
WERAM-Gag-0013 GGTG_03219T0 Gaeumannomyces graminis 29 1e-14 77.8
WERAM-Miv-0014 MVLG_02300T0 Microbotryum violaceum 26 3e-14 77.0
WERAM-Coi-0012 EAS36287 Coccidioides immitis 28 3e-14 77.0
WERAM-Trv-0037 EHK18208 Trichoderma virens 26 6e-14 75.9
Created Date 25-Jun-2016