Tag |
Content |
WERAM ID |
WERAM-Pot-0024 |
Ensembl Protein ID |
POPTR_0002s05280.1 |
Gene Name |
POPTR_0002s05280g |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
Me_Reader |
WD40 |
9.80e-92 |
308.9 |
18 |
313 |
|
Organism |
Populus trichocarpa |
Domain Profile |
Me_Reader WD40
WD40.txt 91 ikvlvgHknaiaelkFsPkdenlllsaSfdkrvrlWd 127 i++l+gH++a+ ++kFs +ll saS dk+++lW POPTR_0002s05280.1 18 IRTLRGHERAVSCVKFSND-GTLLASASLDKTLILWS 53 899*************987.9***************5 PP WD40.txt 41 eikllqkykghdeefysvawtadsnkrhslLasAgdrglirlldveagq.cikvlvgHknaiaelkFsPkdenlllsaSfdkrvrlWdikt 130 + l++++ gh e+++++aw++ds+ ++ sA+d++++r++d ++ + c+k l+gH++ +++++F+P+ +nl++s+Sfd+++r+W++kt POPTR_0002s05280.1 56 DFSLVHRLIGHSEGVSDLAWSSDSH----YICSASDDRTLRIWDARTPFdCLKILKGHSDFVFCVNFNPQ-SNLIVSGSFDETIRIWEVKT 141 567899*******************....9****************9754********************.******************** PP WD40.txt 131 dklkkifeahsdevldvdydlrgslivScgmdgslkiWdvrskrrvcevklvddenpeksnrrVdcvrfs.ngdlilsgsldntivlWdir 220 +k+++++ ahs +v++v+++++gslivS + dgs+kiW+ +++c ++l+dd+np V++v+fs ng++il+++ld t++lW+++ POPTR_0002s05280.1 142 GKCVRVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWE--ASSGTCLKTLIDDKNPA-----VSFVKFSpNGKFILVATLDSTLKLWNYS 225 ***************************************..999**************.....**************************** PP WD40.txt 221 kikqsevavvvLkrfeyskteiyyislsfsvdnkkilvsgdedgkvyvwdlsveaalkakelllklgkvtakimqtsvspnesiiiltalt 311 +k +Lk + ++ +++y+i++ fsv+n+k +vsg+ed++vy+wdl+ k++++kl+++t++ ++++++p+e+ i+++ l POPTR_0002s05280.1 226 TGK-------FLKIYSGHTNKVYCITSTFSVTNGKYIVSGSEDKCVYLWDLQ------QKTMVQKLEGHTDTAISVTCHPTENKIASAGLD 303 ***.......******************************************......9******************************** PP WD40.txt 312 ddnivkiWdr 321 d++++iW++ POPTR_0002s05280.1 304 GDKSIRIWHQ 313 ********97 PP
|
Protein Sequence (Fasta) | MASSGSQQTP PYKPYRHIRT LRGHERAVSC VKFSNDGTLL ASASLDKTLI LWSSPDFSLV 60 HRLIGHSEGV SDLAWSSDSH YICSASDDRT LRIWDARTPF DCLKILKGHS DFVFCVNFNP 120 QSNLIVSGSF DETIRIWEVK TGKCVRVIRA HSMPVTSVHF NRDGSLIVSG SHDGSCKIWE 180 ASSGTCLKTL IDDKNPAVSF VKFSPNGKFI LVATLDSTLK LWNYSTGKFL KIYSGHTNKV 240 YCITSTFSVT NGKYIVSGSE DKCVYLWDLQ QKTMVQKLEG HTDTAISVTC HPTENKIASA 300 GLDGDKSIRI WHQD 314Protein Fasta Sequence
>POPTR_0002s05280.1|WD40|Populus trichocarpa MASSGSQQTPPYKPYRHIRTLRGHERAVSCVKFSNDGTLLASASLDKTLILWSSPDFSLVHRLIGHSEGVSDLAWSSDSHYICSASDDRTLRIWDARTPFDCLKILKGHSDFVFCVNFNPQSNLIVSGSFDETIRIWEVKTGKCVRVIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWEASSGTCLKTLIDDKNPAVSFVKFSPNGKFILVATLDSTLKLWNYSTGKFLKIYSGHTNKVYCITSTFSVTNGKYIVSGSEDKCVYLWDLQQKTMVQKLEGHTDTAISVTCHPTENKIASAGLDGDKSIRIWHQD
|
Nucleotide Sequence (Fasta) | ATCTTCCATT GGAACTTTCA CTTGGGATTT GGTGATGGCC AGCAGTGGAT CGCAACAGAC 60 ACCACCATAC AAACCGTACA GGCACATACG AACCCTGAGG GGCCACGAGC GAGCAGTCTC 120 CTGCGTAAAA TTTTCAAACG ATGGAACGCT CCTGGCCTCA GCCTCCTTGG ACAAAACCCT 180 AATTCTCTGG TCGTCTCCCG ACTTCTCCCT TGTCCACCGC CTCATAGGGC ACTCCGAGGG 240 CGTATCCGAC CTCGCCTGGT CCTCTGACTC TCACTATATC TGCTCCGCCT CTGATGACCG 300 CACTCTCCGC ATCTGGGACG CACGCACCCC CTTCGATTGC CTTAAGATCC TCAAGGGCCA 360 CTCTGATTTT GTGTTCTGTG TGAATTTTAA TCCTCAGTCG AACTTAATCG TCTCGGGTTC 420 TTTTGATGAA ACGATTCGAA TTTGGGAGGT GAAGACAGGG AAATGCGTTA GGGTCATTAG 480 AGCTCATTCT ATGCCGGTAA CATCAGTGCA TTTTAATAGA GATGGTTCTT TGATTGTCTC 540 GGGGAGTCAT GATGGTTCTT GTAAGATTTG GGAGGCTTCT TCTGGTACTT GTTTGAAGAC 600 TCTCATTGAT GATAAGAACC CTGCTGTGTC CTTTGTTAAA TTCTCGCCTA ATGGAAAGTT 660 CATTCTCGTT GCTACTCTTG ATAGCACTCT TAAACTTTGG AATTACTCGA CGGGGAAGTT 720 CTTGAAGATT TACTCTGGTC ACACCAACAA AGTATACTGC ATAACCTCGA CATTCTCTGT 780 GACAAATGGG AAATACATCG TGAGTGGGTC TGAAGACAAG TGTGTTTACT TGTGGGATCT 840 CCAGCAAAAA ACCATGGTTC AGAAACTAGA AGGCCATACT GATACTGCCA TTTCTGTAAC 900 ATGCCACCCT ACAGAGAACA AGATAGCTTC TGCTGGCCTT GATGGTGATA AATCAATCAG 960 AATTTGGCAT CAAGATTAGA GAATCTTACA CCAAGTGCAT TGATATGTCA AAAGAGTGTT 1020 GATGATCAAC AAGTTAAAAA GGAAGTTCAT GATCTGAGGC ATTAACGTAT TATCTGATGA 1080 ATCCTAACAA CCATGTTATT ATCTGGTGGC CAGTGTATTG ATAAACATTT CTTATGAGTG 1140 AATCGTTTGG GCATCTTCAT TCCAAATGGG TATTGTAATG GCAAGGTCTA ATAGATCTCC 1200 AAATAATAAC AATTTGAAAC AAATATATAT TATTCTTTTT TGT
1244Nucleotide Fasta Sequence
>POPTR_0002s05280.1|WD40|Populus trichocarpa ATCTTCCATTGGAACTTTCACTTGGGATTTGGTGATGGCCAGCAGTGGATCGCAACAGACACCACCATACAAACCGTACAGGCACATACGAACCCTGAGGGGCCACGAGCGAGCAGTCTCCTGCGTAAAATTTTCAAACGATGGAACGCTCCTGGCCTCAGCCTCCTTGGACAAAACCCTAATTCTCTGGTCGTCTCCCGACTTCTCCCTTGTCCACCGCCTCATAGGGCACTCCGAGGGCGTATCCGACCTCGCCTGGTCCTCTGACTCTCACTATATCTGCTCCGCCTCTGATGACCGCACTCTCCGCATCTGGGACGCACGCACCCCCTTCGATTGCCTTAAGATCCTCAAGGGCCACTCTGATTTTGTGTTCTGTGTGAATTTTAATCCTCAGTCGAACTTAATCGTCTCGGGTTCTTTTGATGAAACGATTCGAATTTGGGAGGTGAAGACAGGGAAATGCGTTAGGGTCATTAGAGCTCATTCTATGCCGGTAACATCAGTGCATTTTAATAGAGATGGTTCTTTGATTGTCTCGGGGAGTCATGATGGTTCTTGTAAGATTTGGGAGGCTTCTTCTGGTACTTGTTTGAAGACTCTCATTGATGATAAGAACCCTGCTGTGTCCTTTGTTAAATTCTCGCCTAATGGAAAGTTCATTCTCGTTGCTACTCTTGATAGCACTCTTAAACTTTGGAATTACTCGACGGGGAAGTTCTTGAAGATTTACTCTGGTCACACCAACAAAGTATACTGCATAACCTCGACATTCTCTGTGACAAATGGGAAATACATCGTGAGTGGGTCTGAAGACAAGTGTGTTTACTTGTGGGATCTCCAGCAAAAAACCATGGTTCAGAAACTAGAAGGCCATACTGATACTGCCATTTCTGTAACATGCCACCCTACAGAGAACAAGATAGCTTCTGCTGGCCTTGATGGTGATAAATCAATCAGAATTTGGCATCAAGATTAGAGAATCTTACACCAAGTGCATTGATATGTCAAAAGAGTGTTGATGATCAACAAGTTAAAAAGGAAGTTCATGATCTGAGGCATTAACGTATTATCTGATGAATCCTAACAACCATGTTATTATCTGGTGGCCAGTGTATTGATAAACATTTCTTATGAGTGAATCGTTTGGGCATCTTCATTCCAAATGGGTATTGTAATGGCAAGGTCTAATAGATCTCCAAATAATAACAATTTGAAACAAATATATATTATTCTTTTTTGT
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |