WERAM Information

Tag Content
WERAM ID WERAM-Pot-0013
Ensembl Protein ID POPTR_0001s36360.1
Gene Name POPTR_0001s36360g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0001s36360 POPTR_0001s36360.1 POPTR_0001s36360.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 1.40e-25 90.3 128 199
Organism Populus trichocarpa
Domain Profile
  Ac_Reader Bromodomain
           BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssvq 72 
                         +h++ ++F+ pvd   l+ipdYy++ik+PmdL tik+++ +g Yssp+ef++Dvrl f+Na+ yn+++s+ +
  POPTR_0001s36360.1 128 SHQYGWVFNSPVDIVkLNIPDYYTVIKNPMDLGTIKSKISSGAYSSPLEFMADVRLTFKNAMVYNPQGSDAY 199
                         7999**************************************************************999865 PP
Protein Sequence
(Fasta)		MAKKGKFSGR YHRNRFHTAE DTFGVPVQIF SPSHLSPSER KDLEQRLRWE LEQVRNLQKR 60
VDLQRTNGVT LSSSSDILSC SNGTNRPRIE TFRKSSVMTS GPGKKTTPIT PNIILMKQCE 120
TLLKRLMSHQ YGWVFNSPVD IVKLNIPDYY TVIKNPMDLG TIKSKISSGA YSSPLEFMAD 180
VRLTFKNAMV YNPQGSDAYI MADTLNKFFE MRWKAIEKKL PRAGGEVLEE NSGPHEDFET 240
AETSPAKKRK VTSFQHDIMP EPGKRGMTDE ERLNLGRELE SLLGEMPVNI IDFLREHCSS 300
GRHGGEEEIE IDIDELSDDT LFTLRKLLDD YLQEKRKNQT RGEPCEIELL NESGPSNSSM 360
QQKKGNDLGD EEIDIGGNGP PVSSYQPVEI EQEKDTGHKS SKISSDSSSE SVSGLDQLEQ 420
TSQEKLSSVE SDCQQDGESA PSDSQVSLEK RIRHALIKNR FADTILKAKE KSLSQGDKGD 480
PQKLQREREE LELHKKKEKA RLLAEAQAAE DAQRQAEAAA AAEARRKREL EREAARQALL 540
KMEKTVEINE NSQFLEDLEM LRVVPAEHVP ISVDETSPDP SQDGLGGFKF GACNPLEQLG 600
LFMKDDEEEE EGEPLNVLNP LNEVEEGEID
Nucleotide Sequence
(Fasta)		ATGGCAAAGA AAGGTAAATT CAGTGGAAGG TATCATAGAA ATAGATTTCA CACAGCAGAG 60
GACACTTTTG GTGTCCCTGT GCAGATATTT TCTCCATCGC ACCTGTCACC ATCTGAAAGG 120
AAGGATTTAG AACAAAGGTT GAGATGGGAA CTTGAACAAG TAAGGAATCT CCAAAAGAGA 180
GTTGATTTAC AGAGAACAAA TGGTGTTACA CTGTCATCTT CCAGTGACAT TCTTAGTTGT 240
AGCAATGGAA CAAATAGGCC TCGGATAGAA ACTTTTAGGA AGTCTTCGGT TATGACCTCT 300
GGGCCTGGGA AGAAAACAAC ACCAATCACT CCAAATATAA TATTGATGAA ACAGTGTGAG 360
ACGCTGTTGA AACGGTTGAT GTCTCATCAA TACGGTTGGG TCTTCAACAG CCCAGTTGAT 420
ATTGTGAAGT TGAACATCCC GGATTATTAC ACTGTTATTA AGAATCCAAT GGATTTGGGA 480
ACCATAAAGA GCAAGATATC TTCTGGTGCT TACTCAAGCC CTTTGGAGTT TATGGCTGAT 540
GTGAGGCTTA CTTTCAAAAA TGCTATGGTG TACAATCCAC AAGGGTCTGA TGCCTACATT 600
ATGGCAGATA CTCTTAATAA ATTTTTTGAA ATGAGATGGA AAGCTATTGA GAAGAAATTA 660
CCAAGGGCTG GTGGTGAAGT TTTGGAGGAA AATTCAGGTC CTCACGAAGA CTTTGAAACT 720
GCTGAAACAT CTCCTGCAAA AAAGAGAAAA GTAACCTCTT TCCAACATGA CATTATGCCA 780
GAGCCTGGAA AGCGAGGAAT GACAGATGAA GAGAGGCTCA ATTTAGGTAG AGAATTGGAG 840
TCTTTGTTGG GAGAAATGCC TGTAAATATT ATTGATTTCT TGAGGGAACA TTGTTCAAGT 900
GGGAGGCATG GTGGAGAGGA GGAAATTGAG ATAGATATTG ATGAACTCAG TGATGACACC 960
TTGTTCACAT TGCGGAAGCT CCTAGATGAC TATTTGCAAG AGAAACGAAA GAATCAAACC 1020
AGAGGGGAAC CTTGTGAAAT AGAGCTATTG AATGAATCTG GGCCAAGCAA TTCATCCATG 1080
CAACAGAAAA AAGGGAATGA CCTGGGAGAT GAGGAAATTG ACATTGGTGG CAACGGGCCT 1140
CCTGTTTCAA GCTATCAACC TGTGGAGATA GAACAGGAAA AGGATACAGG CCATAAGAGC 1200
AGCAAAATCA GCTCAGATAG CTCCAGTGAA TCTGTCAGTG GTTTGGATCA GCTCGAACAG 1260
ACTTCCCAGG AAAAGCTGAG TTCTGTTGAG TCTGATTGCC AGCAAGATGG GGAAAGTGCT 1320
CCAAGTGATA GCCAGGTCTC TCTTGAGAAG CGTATTAGGC ATGCTTTGAT CAAGAACCGT 1380
TTTGCCGATA CCATATTAAA AGCTAAAGAG AAGTCACTTT CACAGGGTGA CAAGGGGGAT 1440
CCTCAGAAAT TGCAGCGGGA GAGGGAGGAA CTTGAACTGC ATAAAAAGAA AGAAAAAGCA 1500
AGGTTGCTTG CTGAAGCACA AGCTGCCGAA GATGCTCAAA GGCAAGCCGA GGCAGCAGCT 1560
GCGGCTGAGG CTAGACGGAA GAGGGAGCTT GAAAGAGAGG CAGCGCGACA GGCGTTGCTG 1620
AAGATGGAAA AGACTGTTGA AATTAATGAG AACTCTCAGT TTCTTGAAGA CCTGGAAATG 1680
CTCAGGGTTG TCCCTGCTGA GCATGTACCA ATCTCTGTAG ATGAGACGAG CCCAGATCCC 1740
TCACAAGATG GCTTGGGTGG GTTCAAGTTT GGGGCGTGTA ACCCCTTAGA ACAACTTGGT 1800
TTGTTCATGA AAGATGATGA AGAGGAGGAA GAGGGTGAAC CGTTAAATGT TTTAAATCCT 1860
TTAAATGAAG TAGAAGAGGG AGAGATTGAC TGA 1894
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0044 EOY02687 Theobroma cacao 64 0.0 634
WERAM-Viv-0092 VIT_14s0171g00380.t01 Vitis vinifera 59 6e-161 565
WERAM-Glm-0208 GLYMA16G06710.1 Glycine max 56 3e-152 536
WERAM-Prp-0051 EMJ16706 Prunus persica 63 5e-147 518
WERAM-Sol-0038 Solyc02g093880.2.1 Solanum lycopersicum 53 4e-136 482
WERAM-Met-0001 KEH17395 Medicago truncatula 49 7e-127 452
WERAM-Art-0124 AT5G14270.1 Arabidopsis thaliana 48 3e-113 406
WERAM-Arl-0092 fgenesh2_kg.6__ 1398__ AT5G14270.1 Arabidopsis lyrata 49 1e-110 397
WERAM-Sot-0041 PGSC0003DMT400039290 Solanum tuberosum 54 3e-104 376
WERAM-Bro-0129 Bo7g084380.1 Brassica oleracea 42 6e-98 355
WERAM-Amt-0007 ERN06807 Amborella trichopoda 48 5e-95 346
WERAM-Mua-0049 GSMUA_Achr2P20970_001 Musa acuminata 42 1e-87 322
WERAM-Brr-0125 Bra025262.1-P Brassica rapa 50 1e-85 315
WERAM-Sei-0065 Si016501m Setaria italica 36 5e-67 253
WERAM-Tra-0322 Traes_7DL_977C0BE43.2 Triticum aestivum 35 2e-66 251
WERAM-Brd-0087 BRADI3G47960.1 Brachypodium distachyon 37 5e-66 249
WERAM-Lep-0030 LPERR02G18800.1 Leersia perrieri 43 1e-65 248
WERAM-Zem-0009 GRMZM2G006707_P01 Zea mays 37 5e-65 246
WERAM-Hov-0055 MLOC_54045.1 Hordeum vulgare 35 1e-64 245
WERAM-Tru-0075 TRIUR3_28030-P1 Triticum urartu 35 1e-63 242
WERAM-Aet-0046 EMT14126 Aegilops tauschii 42 1e-63 241
WERAM-Orr-0091 ORUFI08G01910.1 Oryza rufipogon 34 2e-62 238
WERAM-Orni-0086 ONIVA08G01570.1 Oryza nivara 34 2e-62 238
WERAM-Ori-0092 BGIOSGA027719-PA Oryza indica 34 2e-62 237
WERAM-Sob-0073 Sb04g025160.1 Sorghum bicolor 41 3e-62 237
WERAM-Orp-0024 OPUNC02G21060.1 Oryza punctata 37 1e-60 231
WERAM-Orl-0019 KN538715.1_FGP124 Oryza longistaminata 34 3e-60 230
WERAM-Ors-0023 OS02T0601800-01 Oryza sativa 40 4e-59 226
WERAM-Org-0025 ORGLA02G0198800.1 Oryza glaberrima 40 4e-59 226
WERAM-Orb-0025 OBART02G23090.1 Oryza barthii 40 5e-59 226
WERAM-Orm-0027 OMERI02G22640.1 Oryza meridionalis 40 7e-59 226
WERAM-Orgl-0026 OGLUM02G23450.1 Oryza glumaepatula 40 2e-58 224
WERAM-Orbr-0029 OB02G30530.1 Oryza brachyantha 41 4e-58 223
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 39 2e-45 181
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 41 6e-37 153
Created Date 25-Jun-2016