WERAM Information

Tag Content
WERAM ID WERAM-Pot-0012
Ensembl Protein ID POPTR_0001s35610.1
Gene Name POPTR_0001s35610g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0001s35610 POPTR_0001s35610.1 POPTR_0001s35610.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Tudor 0.0034 18.7 91 208
Organism Populus trichocarpa
Domain Profile
  Me_Reader Tudor
           Tudor.txt   5 GlrVvakwssdG....y 17 
                         G++V a+ + d+    +
  POPTR_0001s35610.1  91 GEQVAARVTGDNaekdE 107
                         77777776655544444 PP
           Tudor.txt   4 vGlrVvakwssdGyfYsgkiVvkghrvesgeeyysikyedqrk 46 
                         +G  V+a +  + + Y++++V++ ++v    +yy+ +++d+++
  POPTR_0001s35610.1 166 PGRHVLAVYPGTTALYKATVVSPLRKVTIPSTYYLLEFDDDEE 208
                         6889999999777***************************986 PP
Protein Sequence
(Fasta)		PEVVEKPGDT SLAKLKTLYT QAKELSESEV SVSSALLTQL DALLPSGPPG QQRRRIEGND 60
QKRKRIKADS DISRLSPAVR SQLEACASLK GEQVAARVTG DNAEKDEWFV VKVIHFDRET 120
KEFEVLDEEP GDDEESGGQR KYKLPMSCII PFPKRNDPSS APDFPPGRHV LAVYPGTTAL 180
YKATVVSPLR KVTIPSTYYL LEFDDDEEDG ALPQRIVPFY KVVPLPEGHR Q 231
Nucleotide Sequence
(Fasta)		CCTGAGGTGG TTGAGAAGCC TGGTGATACT TCGTTGGCAA AGCTCAAAAC TTTATATACT 60
CAGGCCAAAG AACTTTCAGA GAGTGAAGTA AGTGTTTCCA GTGCCCTGTT GACTCAATTG 120
GATGCTCTGT TACCATCTGG ACCTCCAGGT CAACAACGAA GAAGGATAGA AGGTAATGAT 180
CAGAAAAGGA AAAGAATCAA AGCCGATTCA GATATCTCAA GGCTCTCTCC TGCAGTAAGA 240
AGTCAACTTG AAGCATGTGC TAGTCTAAAG GGTGAACAGG TAGCAGCTAG GGTCACAGGT 300
GATAATGCTG AAAAGGATGA GTGGTTTGTT GTAAAAGTGA TTCATTTTGA TAGGGAAACA 360
AAAGAATTCG AAGTACTTGA TGAGGAGCCG GGAGATGACG AAGAGAGTGG TGGCCAAAGA 420
AAGTACAAGC TGCCCATGTC ATGTATTATA CCTTTCCCCA AGCGAAATGA TCCTTCTAGT 480
GCCCCAGATT TTCCTCCTGG GAGACATGTT TTGGCTGTCT ATCCAGGAAC AACAGCACTT 540
TATAAGGCAA CTGTTGTGAG CCCCCTTCGG AAGGTAACTA TTCCATCCAC CTATTATTTG 600
CTGGAGTTTG ATGACGATGA AGAAGATGGA GCCTTGCCTC AGAGGATTGT TCCCTTCTAT 660
AAGGTGGTTC CCTTACCAGA AGGGCATCGT CAATGA 697
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orni-0121 ONIVA12G08890.1 Oryza nivara 69 6e-67 251
WERAM-Orr-0122 ORUFI12G10040.1 Oryza rufipogon 68 1e-66 249
WERAM-Orgl-0118 OGLUM12G10350.1 Oryza glumaepatula 68 1e-66 249
WERAM-Amt-0061 ERN13844 Amborella trichopoda 66 3e-61 232
WERAM-Php-0040 PP1S19_93V6.3 Physcomitrella patens 56 9e-47 184
WERAM-Osl-0023 ABO96036 Ostreococcus lucimarinus 37 7e-13 71.2
WERAM-Asm-0027 ENSAMXP00000003470.1 Astyanax mexicanus 32 2e-06 49.7
Created Date 25-Jun-2016