WERAM Information

Tag Content
WERAM ID WERAM-Pot-0006
Ensembl Protein ID POPTR_0001s19000.1
Gene Name POPTR_0001s19000g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0001s19000 POPTR_0001s19000.1 POPTR_0001s19000.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Me_Reader_other 2.00e-69 258
Organism Populus trichocarpa
Domain Profile
  Me_Reader Me_Reader_other
Query: 4   EFTLSEMLEMENMFKELEEGPLAPQFCEKLASSFSLAPSRDGKQAITPRQVKSWFQDRLK 63
           EFTLSE+++MEN++KEL +  L   FC+ +AS+FS + +R+GK +IT +QV+ WFQ++LK
Sbjct: 13  EFTLSEIVDMENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEKLK 72
Query: 64  -KSQPRVASSNMALKLFADLSDAS--------ASF-GATESSQKLKGNASDLSELIFEAL 113
            +SQP+  +         DLS+ S        A+F G +   Q  KG ASDL++L FEA 
Sbjct: 73  HQSQPKSKTLPSPPLQIHDLSNPSSYASNASNATFVGNSTFVQTRKGKASDLADLAFEAK 132
Query: 114 SSKDNAWYDVASFLNYRVVCSGELEVRVRFAGFRNTDDEWVNVRRAVRERSIPLESSECQ 173
           S++D AWYDV+SFL YRV+ +GELEVRVRF+GF N  DEWVNV+ +VRERSIP+E SEC 
Sbjct: 133 SARDYAWYDVSSFLTYRVLRTGELEVRVRFSGFDNRHDEWVNVKTSVRERSIPVEPSECG 192
Query: 174 RVKVGDLVLCFQEREERAVYCDAHIVEINRKLHDINGCRCTFVVRYDHDDFEEEVRLDRL 233
           RV VGDL+LCFQERE++A+YCD H++ I R +HD   C C F+VRY+ D+ EE + L+R+
Sbjct: 193 RVNVGDLLLCFQEREDQALYCDGHVLNIKRGIHDHARCNCVFLVRYELDNTEESLGLERI 252
Query: 234 CGRP 237
           C RP
Sbjct: 253 CRRP 256
Protein Sequence
(Fasta)		MDFEFTLSEM LEMENMFKEL EEGPLAPQFC EKLASSFSLA PSRDGKQAIT PRQVKSWFQD 60
RLKKSQPRVA SSNMALKLFA DLSDASASFG ATESSQKLKG NASDLSELIF EALSSKDNAW 120
YDVASFLNYR VVCSGELEVR VRFAGFRNTD DEWVNVRRAV RERSIPLESS ECQRVKVGDL 180
VLCFQEREER AVYCDAHIVE INRKLHDING CRCTFVVRYD HDDFEEEVRL DRLCGRPTP 239
Nucleotide Sequence
(Fasta)		GGCAAGGCAA AACCCTTACT CTATCTGGTT CCCATTTCAT CACAGCCATG GATTTTGAAT 60
TCACACTTTC TGAGATGCTG GAAATGGAGA ATATGTTCAA GGAATTAGAG GAGGGACCAC 120
TAGCTCCGCA GTTTTGTGAG AAGCTTGCAA GCAGCTTTAG TTTAGCGCCA AGTCGTGATG 180
GAAAGCAAGC CATTACACCT CGACAGGTTA AAAGCTGGTT CCAGGATAGA CTAAAGAAGT 240
CACAACCTCG AGTTGCTTCT TCAAATATGG CTCTCAAATT ATTCGCTGAT CTCTCTGATG 300
CAAGTGCTTC TTTTGGTGCA ACTGAGAGTT CACAAAAGCT CAAAGGCAAT GCCTCTGATC 360
TTTCAGAGTT GATTTTTGAA GCTTTGTCCT CAAAAGATAA TGCTTGGTAT GATGTTGCTT 420
CTTTCCTCAA CTATAGAGTT GTTTGCTCTG GTGAACTTGA AGTGCGAGTA AGATTTGCTG 480
GGTTTCGTAA TACAGATGAT GAGTGGGTGA ATGTGAGAAG GGCAGTGCGG GAACGATCTA 540
TTCCTTTAGA ATCTTCAGAA TGTCAGAGGG TCAAAGTTGG TGATCTTGTG CTGTGCTTTC 600
AGGAAAGAGA AGAACGAGCA GTATACTGTG ATGCCCATAT TGTAGAGATC AACAGGAAAT 660
TACATGATAT AAATGGTTGT AGATGCACCT TTGTAGTTCG TTATGATCAT GACGACTTCG 720
AGGAAGAAGT TCGGTTGGAT AGGTTATGTG GCAGACCAAC GCCATAGATT CTCAGGCAGT 780
GGACAGAGGA TGAGAAGTGG AAATTGCATT TCTTTGTTTG TAAAAAGAAG GGTGCCTGTA 840
ATGTTCTTTG TAATTTATCG TTTTCATCAC ATAACAGTAA ATACTGGCCT TCATAAACTA 900
ATTTCTCCCA ACTTGAAATA AAACCATAAT TAAACAATTA TAATTTTTCA TCTT 955
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Viv-0062 VIT_09s0002g03660.t01 Vitis vinifera 59 1e-76 283
WERAM-Thc-0076 EOY26911 Theobroma cacao 59 5e-75 278
WERAM-Bro-0092 Bo5g020650.1 Brassica oleracea 53 2e-69 259
WERAM-Art-0011 AT1G15215.2 Arabidopsis thaliana 53 2e-69 258
WERAM-Brr-0130 Bra026155.1-P Brassica rapa 53 5e-69 257
WERAM-Met-0171 KEH18213 Medicago truncatula 51 2e-66 249
WERAM-Arl-0017 fgenesh1_pg.C_scaffold_1001378 Arabidopsis lyrata 50 3e-65 245
WERAM-Glm-0091 GLYMA08G21560.5 Glycine max 48 1e-58 223
WERAM-Sot-0007 PGSC0003DMT400006487 Solanum tuberosum 44 5e-57 218
WERAM-Sol-0058 Solyc03g120940.2.1 Solanum lycopersicum 44 9e-57 217
WERAM-Prp-0090 EMJ17222 Prunus persica 73 4e-56 214
WERAM-Org-0096 ORGLA09G0048600.1 Oryza glaberrima 43 1e-51 200
WERAM-Orni-0098 ONIVA09G05900.1 Oryza nivara 43 1e-51 199
WERAM-Ori-0106 BGIOSGA029938-PA Oryza indica 43 1e-51 199
WERAM-Orgl-0096 OGLUM09G07230.2 Oryza glumaepatula 43 2e-51 199
WERAM-Orr-0103 ORUFI09G07320.1 Oryza rufipogon 43 2e-51 199
WERAM-Orbr-0105 OB09G14330.1 Oryza brachyantha 44 6e-51 197
WERAM-Orm-0090 OMERI09G05210.2 Oryza meridionalis 43 9e-51 197
WERAM-Orb-0100 OBART09G06730.1 Oryza barthii 42 8e-47 184
Created Date 25-Jun-2016