WERAM Information

Tag Content
WERAM ID WERAM-Pot-0002
Ensembl Protein ID POPTR_0001s05120.1
Gene Name POPTR_0001s05120g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0001s05120 POPTR_0001s05120.1 POPTR_0001s05120.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 7.10e-06 27.2 2 46
Organism Populus trichocarpa
Domain Profile
  Ac_Reader Bromodomain
           BROMO.txt 26 ikePmdLstikerleegnYss.peefvkDvrlifnNakaynenks 69
                        ++++mdL+ i++rl++g Ys+  ++f kD+  ++nNa  + +++s
  POPTR_0001s05120.1  2 VRQHMDLQMIQSRLNKGVYSNcFQKFFKDLLILLNNAIVFFRKNS 46
                        789******************9***************99987765 PP
Protein Sequence
(Fasta)		MVRQHMDLQM IQSRLNKGVY SNCFQKFFKD LLILLNNAIV FFRKNSPENL AANELRAVVL 60
KEVKEKLRKP KPQPVDAKPA TEQHSAALSR PNKSSSSTLV ACCKHSSMKA ISGGAGKKGD 120
KEMEGKHKVN EKKVEVSIDR IEEKGLKKKT TKERSVSGRR NSKTSNKNGE IKHQYGGNEL 180
SSHDALEIKV DRKEHTGRKK QGAASFLKRM KQNSPSRVTE EDSSSSEEDE SKDGRKDDKK 240
RRGREADGIA KRVRGGRPPK KQMESGSGTG KRGRDNEDSE VGVGGGGRVK KRSKRW 296
Nucleotide Sequence
(Fasta)		ATGGTTCGGC AGCACATGGA TCTTCAAATG ATTCAATCTA GGCTGAATAA AGGGGTTTAC 60
TCCAATTGCT TCCAAAAGTT CTTCAAGGAT CTCCTGATTT TATTAAACAA TGCAATTGTT 120
TTCTTTAGAA AAAACTCACC GGAAAATCTT GCCGCGAATG AACTTCGAGC TGTTGTTTTG 180
AAGGAAGTGA AGGAGAAGCT TCGGAAACCA AAACCTCAAC CTGTGGATGC CAAGCCTGCA 240
ACTGAACAAC ATTCTGCTGC GCTTTCAAGA CCGAACAAAT CTTCTTCATC TACCTTGGTA 300
GCCTGTTGCA AACACAGTTC CATGAAAGCA ATATCTGGAG GTGCTGGTAA AAAAGGTGAT 360
AAAGAGATGG AAGGAAAACA TAAGGTAAAT GAGAAGAAGG TTGAAGTTTC AATTGATAGG 420
ATTGAGGAGA AGGGTTTAAA GAAGAAAACA ACAAAAGAGA GGTCGGTCTC GGGTCGTAGA 480
AACTCAAAGA CAAGCAACAA GAATGGAGAG ATAAAGCATC AATATGGTGG TAATGAATTA 540
AGTTCACATG ATGCGTTGGA GATTAAGGTG GATAGGAAAG AACACACAGG GAGGAAGAAG 600
CAAGGAGCAG CGAGCTTCTT GAAAAGGATG AAGCAAAATT CTCCAAGTCG AGTGACGGAG 660
GAGGACTCCT CCTCCTCGGA GGAGGATGAA AGTAAAGATG GTAGAAAGGA TGATAAAAAG 720
AGGAGAGGAA GGGAGGCAGA TGGGATAGCT AAGAGGGTAA GAGGAGGAAG GCCGCCGAAG 780
AAGCAAATGG AGTCAGGCAG TGGGACGGGG AAGAGGGGGA GAGATAATGA GGATTCCGAG 840
GTAGGGGTTG GGGGTGGCGG AAGAGTAAAA AAGAGGTCAA AGAGGTGGTG A 892
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0108 EOY32463 Theobroma cacao 52 4e-58 222
WERAM-Viv-0085 VIT_13s0156g00340.t01 Vitis vinifera 37 1e-17 87.4
WERAM-Sol-0008 Solyc01g073950.2.1 Solanum lycopersicum 55 1e-13 74.3
WERAM-Prp-0043 EMJ22101 Prunus persica 57 1e-13 74.3
WERAM-Amt-0030 ERN11592 Amborella trichopoda 56 2e-13 73.6
WERAM-Arl-0077 fgenesh2_kg.4__ 2627__ AT2G44430.1 Arabidopsis lyrata 29 1e-12 71.2
WERAM-Art-0091 AT3G57980.1 Arabidopsis thaliana 28 1e-12 71.2
WERAM-Glm-0202 GLYMA15G42440.2 Glycine max 36 2e-12 70.1
WERAM-Sem-0102 EFJ33930 Selaginella moellendorffii 50 1e-11 68.2
WERAM-Sot-0018 PGSC0003DMT400016153 Solanum tuberosum 52 3e-11 66.2
WERAM-Brr-0072 Bra014512.1-P Brassica rapa 31 8e-11 65.1
WERAM-Bro-0157 Bo8g094870.1 Brassica oleracea 27 5e-10 62.4
WERAM-Aet-0108 EMT21081 Aegilops tauschii 45 2e-09 60.8
WERAM-Tru-0078 TRIUR3_28812-P1 Triticum urartu 43 3e-09 59.7
WERAM-Hov-0028 MLOC_20426.3 Hordeum vulgare 45 4e-09 59.3
WERAM-Sob-0110 Sb07g027680.1 Sorghum bicolor 44 4e-09 59.3
WERAM-Php-0024 PP1S148_42V6.1 Physcomitrella patens 44 6e-09 58.9
WERAM-Lep-0092 LPERR08G16990.1 Leersia perrieri 44 2e-08 57.0
WERAM-Met-0045 AES66032 Medicago truncatula 48 2e-08 57.0
WERAM-Sei-0046 Si013408m Setaria italica 43 3e-08 56.6
WERAM-Zem-0018 GRMZM2G022499_P01 Zea mays 43 3e-08 56.6
WERAM-Mua-0126 GSMUA_Achr8P25530_001 Musa acuminata 44 4e-08 55.8
WERAM-Orp-0090 OPUNC08G18190.1 Oryza punctata 38 6e-08 55.5
WERAM-Org-0093 ORGLA08G0177200.1 Oryza glaberrima 37 4e-06 49.7
WERAM-Orni-0095 ONIVA08G22660.1 Oryza nivara 36 4e-06 49.3
WERAM-Orgl-0092 OGLUM08G21320.1 Oryza glumaepatula 36 4e-06 49.3
Created Date 25-Jun-2016