WERAM Information

Tag Content
WERAM ID WERAM-Sot-0097
Ensembl Protein ID PGSC0003DMT400082473
Gene Name PGSC0003DMG400032556
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400032556 PGSC0003DMT400082473 PGSC0003DMT400082473
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC SIR2 3.50e-70 237.8 64 344
Organism Solanum tuberosum
Domain Profile
  HDAC SIR2
              SIR2.txt   2 klakllkkskkivvltGAGiStsaGIPDFRsseGlysklkkeelpspeaifdldffrkdpkv..fyalakelyp.lgsakPtktHyfla 87 
                           +l++++ +s k+vvltGAG+St++GIPD+Rs++G ys+        +++i++++f+r+ +++  ++a++++ ++ +++a+P++ H +l+
  PGSC0003DMT400082473  64 SLYEFFDRSTKLVVLTGAGMSTESGIPDYRSPNGAYST-------GFKPITHQEFLRSIKARrrYWARSYAGWRrFTAAQPSTGHIALS 145
                           578999*******************************9.......5899*******99887778************************* PP
              SIR2.txt  88 elekkgkllrlytQNiDgLerkaglkedklvelHGslatasCtkCkkefpreeikeklkak............................ 148
                           +lek+g +++l+tQN+D+L+++ag++    +elHG+++ + Ct+C+ ++pr+ +++++ka+                            
  PGSC0003DMT400082473 146 SLEKAGHISFLITQNVDRLHHRAGSN---PLELHGTVYIVACTNCGFSLPRDLFQDQVKAHnpkwaeaiesldydsrsdksfgmkqrpd 231
                           *************************6...9*********************************************************** PP
              SIR2.txt 149 .............ekvpkCekCkgvlkpdivffgenlpeefleeveedlkeadlllvlGtSlkvepvaslvkkavkkkvpvllvnleev 224
                                        + +p+C++C+gvlkpd+vffg+n+p++++++++e++k +d++lvlG+Sl+ +++++l+k+a ++++ ++++n++ +
  PGSC0003DMT400082473 232 gdieidekfweenFYIPECQSCQGVLKPDVVFFGDNVPKSRADAAMEAAKGCDAFLVLGSSLMTMSAFRLIKAAREAGAATAIINIGAT 320
                           *************99************************************************************************** PP
              SIR2.txt 225 kadkladlkllgdcdevveellkl 248
                           +ad+++ lk++++++e++ +ll+ 
  PGSC0003DMT400082473 321 RADDIVPLKISARVGEILPRLLSI 344
                           *******************99875 PP
Protein Sequence
(Fasta)		MGKWFSGVKK FIPFEGYAKS VKTAARISFP KISSDCTDKE PSNFLSHKKM VPYSDPPSME 60
DVESLYEFFD RSTKLVVLTG AGMSTESGIP DYRSPNGAYS TGFKPITHQE FLRSIKARRR 120
YWARSYAGWR RFTAAQPSTG HIALSSLEKA GHISFLITQN VDRLHHRAGS NPLELHGTVY 180
IVACTNCGFS LPRDLFQDQV KAHNPKWAEA IESLDYDSRS DKSFGMKQRP DGDIEIDEKF 240
WEENFYIPEC QSCQGVLKPD VVFFGDNVPK SRADAAMEAA KGCDAFLVLG SSLMTMSAFR 300
LIKAAREAGA ATAIINIGAT RADDIVPLKI SARVGEILPR LLSIGSLSIP AP 352
Nucleotide Sequence
(Fasta)		CATATATAAA CTGAGAGGGA AAAAAAACCA TTGCAAATTC CCCTTTTTCA GTTGTGAGCG 60
GTGGAGAATT GTTCGACGTG GAAGACGATA CGTTCGATGG CGGAACAGCA GAGAACCTAA 120
AAATAAGGAA ATTGAGAGCA AAAATCTGAA ATTATAGTCC ATTTCTATGG CCATGTCAAT 180
GTCACTGCGA CTTTGTTGCA GACCTTCAAT TTCTGGCTTC AAGAATAAAA GAGATTTGTT 240
GGGCTTAGAA TTGGCAGCTT ATCAATCAAG TAATCCAATG GGGAAATGGT TTAGTGGAGT 300
GAAGAAGTTC ATCCCCTTTG AGGGATATGC TAAGTCTGTG AAAACAGCAG CACGAATATC 360
ATTTCCAAAG ATCTCATCAG ACTGTACAGA TAAAGAACCT TCAAATTTTT TGAGTCACAA 420
GAAGATGGTT CCTTATTCGG ACCCGCCTAG CATGGAAGAT GTGGAAAGTT TGTATGAATT 480
CTTTGATAGA AGTACCAAGC TTGTTGTATT GACGGGAGCT GGCATGAGCA CAGAGAGTGG 540
AATTCCGGAT TACAGAAGCC CAAACGGAGC TTATAGTACG GGTTTCAAAC CAATTACCCA 600
TCAGGAGTTT CTTCGATCAA TCAAGGCTCG AAGGCGCTAT TGGGCACGGA GCTATGCTGG 660
CTGGAGACGT TTCACTGCTG CTCAACCTAG TACAGGTCAT ATAGCTCTAT CATCTCTTGA 720
GAAAGCAGGC CATATAAGTT TTCTGATTAC ACAGAATGTG GACAGGCTGC ATCACCGAGC 780
TGGCAGCAAT CCTCTTGAAT TGCATGGGAC TGTCTACATT GTTGCCTGTA CAAATTGTGG 840
TTTTTCTTTA CCTCGAGATC TATTTCAAGA TCAAGTGAAG GCTCATAATC CCAAGTGGGC 900
AGAAGCTATT GAAAGTTTGG ACTATGACAG TCGATCAGAC AAGAGCTTTG GAATGAAACA 960
AAGGCCTGAT GGGGATATTG AGATTGATGA GAAATTCTGG GAAGAGAATT TCTACATTCC 1020
TGAATGTCAG AGCTGCCAAG GAGTTCTGAA ACCTGACGTT GTCTTCTTTG GGGATAATGT 1080
CCCCAAATCT AGGGCAGATG CTGCCATGGA AGCTGCAAAG GGATGTGATG CCTTCCTTGT 1140
ACTTGGTTCA TCTTTGATGA CCATGTCCGC TTTCCGGCTT ATCAAAGCTG CGCGTGAGGC 1200
AGGTGCTGCT ACTGCAATTA TAAATATTGG TGCTACACGA GCTGACGATA TTGTACCTTT 1260
GAAAATTAGT GCTCGAGTTG GAGAGATACT TCCAAGATTG CTCAGCATTG GATCGTTGAG 1320
TATCCCTGCT CCCTAGTTCC TGATGCAGAG AACTGTTAAT TAATAGCATC CAGATTCTTG 1380
TTCATCAGTT GCTGCAATGG AATGTACACT TGGACGGAAC ATGTAAGTTC GCTGCATTTC 1440
ACTTGTGGTA AATCCACTAA ATCCATCCCA ATGTTTGTAA TTCTTAAAAA TGCACTGCTC 1500
AAGTACCACA CACTAATGTG TGCGCGTCTG TATTTCCACA CAACTCGACT ACTTTGAATT 1560
TCTAATGAGT GAGTTGAAGC TGAAATGGCG CGAAAATACA CAGAATATTG CTTGGAAATG 1620
AAAAATTTTA GGATGGCCTT TTGCATCATT AAAGATTTAT TATGCTTGTA TAAGATTGTA 1680
GAGGAATAGG GGTGGGAATT TTT 1704
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0062 Solyc04g009430.2.1 Solanum lycopersicum 97 0.0 669
WERAM-Prp-0069 EMJ12669 Prunus persica 75 2e-145 512
WERAM-Thc-0008 EOX92647 Theobroma cacao 73 2e-140 495
WERAM-Viv-0046 VIT_07s0031g02510.t01 Vitis vinifera 72 2e-139 492
WERAM-Glm-0041 GLYMA04G38730.1 Glycine max 72 3e-139 492
WERAM-Pot-0061 POPTR_0005s06930.1 Populus trichocarpa 74 2e-138 489
WERAM-Art-0118 AT5G09230.7 Arabidopsis thaliana 72 6e-138 487
WERAM-Met-0074 AES72910 Medicago truncatula 72 3e-137 485
WERAM-Arl-0027 fgenesh1_pg.C_scaffold_6000741 Arabidopsis lyrata 71 1e-136 483
WERAM-Brr-0142 Bra028643.1-P Brassica rapa 72 2e-132 469
WERAM-Bro-0024 Bo2g009270.1 Brassica oleracea 71 2e-129 459
WERAM-Amt-0023 ERN08785 Amborella trichopoda 72 2e-126 449
WERAM-Mua-0095 GSMUA_Achr6P25880_001 Musa acuminata 69 2e-124 442
WERAM-Sei-0033 Si009965m Setaria italica 69 2e-123 439
WERAM-Sob-0114 Sb08g004900.1 Sorghum bicolor 68 4e-121 431
WERAM-Orl-0007 KN538685.1_FGP039 Oryza longistaminata 70 9e-121 430
WERAM-Ors-0107 OS12T0179800-01 Oryza sativa 69 1e-120 429
WERAM-Orm-0102 OMERI12G03010.1 Oryza meridionalis 69 1e-120 429
WERAM-Brd-0118 BRADI4G41127.1 Brachypodium distachyon 69 2e-120 429
WERAM-Orp-0109 OPUNC12G04720.1 Oryza punctata 69 3e-120 429
WERAM-Ori-0126 BGIOSGA036526-PA Oryza indica 69 4e-120 428
WERAM-Orr-0119 ORUFI12G05460.1 Oryza rufipogon 69 4e-120 428
WERAM-Lep-0113 LPERR12G04350.1 Leersia perrieri 69 7e-120 427
WERAM-Orbr-0122 OB12G14620.1 Oryza brachyantha 69 2e-119 426
WERAM-Tra-0230 Traes_5DL_84C49FB59.2 Triticum aestivum 67 2e-117 419
WERAM-Aet-0050 EMT19694 Aegilops tauschii 62 5e-116 414
WERAM-Zem-0150 GRMZM5G807054_P01 Zea mays 65 9e-113 404
WERAM-Orni-0118 ONIVA12G04440.1 Oryza nivara 71 2e-109 392
WERAM-Orgl-0114 OGLUM12G05580.1 Oryza glumaepatula 71 2e-109 392
WERAM-Php-0025 PP1S15_90V6.1 Physcomitrella patens 59 6e-99 358
WERAM-Sem-0074 EFJ28669 Selaginella moellendorffii 56 7e-88 321
WERAM-Chr-0008 EDP00705 Chlamydomonas reinhardtii 49 3e-63 239
WERAM-Lac-0179 ENSLACP00000020887.1 Latimeria chalumnae 46 2e-61 233
WERAM-Caj-0096 ENSCJAP00000015889.2 Callithrix jacchus 46 1e-60 230
WERAM-Ict-0083 ENSSTOP00000008774.2 Ictidomys tridecemlineatus 46 4e-60 229
WERAM-Orc-0113 ENSOCUP00000009744.3 Oryctolagus cuniculus 43 3e-59 226
WERAM-Pes-0110 ENSPSIP00000013404.1 Pelodiscus sinensis 45 6e-59 225
WERAM-Ocp-0148 ENSOPRP00000015399.1 Ochotona princeps 44 1e-58 224
WERAM-Fec-0171 ENSFCAP00000020847.1 Felis catus 46 1e-58 224
WERAM-Tas-0026 ENSTSYP00000002962.1 Tarsius syrichta 45 1e-58 224
WERAM-Caf-0113 ENSCAFP00000015057.3 Canis familiaris 46 1e-58 223
WERAM-Paa-0081 ENSPANP00000005490.1 Papio anubis 45 3e-58 223
WERAM-Chs-0026 ENSCSAP00000015768.1 Chlorocebus sabaeus 46 3e-58 223
WERAM-Bot-0183 ENSBTAP00000028210.3 Bos taurus 42 3e-58 223
WERAM-Mup-0031 ENSMPUP00000003126.1 Mustela putorius furo 46 6e-58 221
WERAM-Ova-0127 ENSOARP00000012850.1 Ovis aries 42 9e-58 221
WERAM-Otg-0098 ENSOGAP00000008496.1 Otolemur garnettii 46 1e-57 221
WERAM-Gog-0207 ENSGGOP00000025620.1 Gorilla gorilla 44 2e-57 220
WERAM-Pat-0044 ENSPTRP00000009383.4 Pan troglodytes 44 2e-57 219
WERAM-Aim-0062 ENSAMEP00000005483.1 Ailuropoda melanoleuca 46 3e-57 219
WERAM-Ran-0010 ENSRNOP00000001523.4 Rattus norvegicus 45 3e-57 219
WERAM-Poa-0046 ENSPPYP00000005727.2 Pongo abelii 43 3e-57 219
WERAM-Eqc-0095 ENSECAP00000011260.1 Equus caballus 41 3e-57 219
WERAM-Hos-0046 ENSP00000202967.4 Homo sapiens 44 4e-57 219
WERAM-Mum-0098 ENSMUSP00000107697.1 Mus musculus 45 4e-57 219
WERAM-Cap-0138 ENSCPOP00000011117.2 Cavia porcellus 44 7e-57 218
WERAM-Chh-0046 ENSCHOP00000005172.1 Choloepus hoffmanni 45 1e-56 217
WERAM-Sus-0071 ENSSSCP00000010568.2 Sus scrofa 41 2e-56 216
WERAM-Meg-0094 ENSMGAP00000009092.2 Meleagris gallopavo 43 6e-56 215
WERAM-Anp-0117 ENSAPLP00000013436.1 Anas platyrhynchos 45 8e-56 214
WERAM-Ora-0041 ENSOANP00000006568.2 Ornithorhynchus anatinus 45 8e-56 214
WERAM-Gaga-0078 ENSGALP00000011706.4 Gallus gallus 43 1e-55 214
WERAM-Drm-0032 FBpp0070817 Drosophila melanogaster 42 1e-55 214
WERAM-Xet-0032 ENSXETP00000009271.1 Xenopus tropicalis 43 1e-55 214
WERAM-Asm-0019 ENSAMXP00000002317.1 Astyanax mexicanus 43 1e-55 214
WERAM-Tag-0120 ENSTGUP00000009802.1 Taeniopygia guttata 44 2e-55 213
WERAM-Loa-0028 ENSLAFP00000001879.2 Loxodonta africana 43 4e-55 212
WERAM-Fia-0095 ENSFALP00000007922.1 Ficedula albicollis 43 7e-55 211
WERAM-Sah-0071 ENSSHAP00000008646.1 Sarcophilus harrisii 45 1e-54 211
WERAM-Dar-0026 ENSDARP00000027611.6 Danio rerio 42 7e-54 208
WERAM-Pof-0223 ENSPFOP00000018246.2 Poecilia formosa 42 2e-53 206
WERAM-Tut-0072 ENSTTRP00000005343.1 Tursiops truncatus 41 4e-53 206
WERAM-Orla-0208 ENSORLP00000024753.1 Oryzias latipes 42 4e-53 206
WERAM-Ect-0086 ENSETEP00000009903.1 Echinops telfairi 41 8e-53 204
WERAM-Cii-0061 ENSCINP00000027422.2 Ciona intestinalis 42 1e-52 204
WERAM-Nol-0169 ENSNLEP00000018942.2 Nomascus leucogenys 45 1e-52 204
WERAM-Xim-0194 ENSXMAP00000015621.1 Xiphophorus maculatus 41 1e-52 204
WERAM-Pem-0012 ENSPMAP00000001780.1 Petromyzon marinus 43 1e-52 204
WERAM-Gaa-0017 ENSGACP00000001945.1 Gasterosteus aculeatus 42 3e-52 202
WERAM-Tar-0187 ENSTRUP00000038866.1 Takifugu rubripes 42 3e-52 202
WERAM-Dan-0155 ENSDNOP00000033669.1 Dasypus novemcinctus 43 3e-51 199
WERAM-Gam-0012 ENSGMOP00000001231.1 Gadus morhua 42 3e-51 199
WERAM-Orn-0178 ENSONIP00000018093.1 Oreochromis niloticus 42 5e-51 198
WERAM-Ptv-0014 ENSPVAP00000002101.1 Pteropus vampyrus 42 1e-50 197
WERAM-Anc-0024 ENSACAP00000002561.3 Anolis carolinensis 43 6e-50 195
WERAM-Soa-0051 ENSSARP00000004940.1 Sorex araneus 42 1e-49 194
WERAM-Cae-0023 F46G10.7a Caenorhabditis elegans 39 2e-47 186
WERAM-Tub-0044 ENSTBEP00000005291.1 Tupaia belangeri 41 1e-46 184
WERAM-Ere-0059 ENSEEUP00000005136.1 Erinaceus europaeus 28 6e-21 99.0
WERAM-Ten-0147 ENSTNIP00000015282.1 Tetraodon nigroviridis 30 3e-20 96.7
WERAM-Mod-0008 ENSMODP00000000983.1 Monodelphis domestica 28 3e-19 93.2
WERAM-Scj-0035 EEB09012 Schizosaccharomyces japonicus 26 5e-19 92.4
WERAM-Scs-0014 EDN99996 Sclerotinia sclerotiorum 28 2e-18 90.9
WERAM-Myl-0161 ENSMLUP00000013308.2 Myotis lucifugus 29 2e-18 90.9
WERAM-Mam-0069 ENSMMUP00000011380.2 Macaca mulatta 28 7e-18 89.0
WERAM-Cis-0075 ENSCSAVP00000016120.1 Ciona savignyi 27 7e-18 89.0
WERAM-Dio-0050 ENSDORP00000004937.1 Dipodomys ordii 28 1e-17 87.8
WERAM-Org-0043 ORGLA04G0042700.1 Oryza glaberrima 29 3e-17 86.7
WERAM-Asfu-0001 CADAFUAP00000229 Aspergillus fumigatus 26 4e-17 86.3
WERAM-Mae-0123 ENSMEUP00000012391.1 Macropus eugenii 36 8e-17 85.1
WERAM-Fuo-0021 FOXG_06023P0 Fusarium oxysporum 27 4e-16 82.8
WERAM-Leo-0013 ENSLOCP00000002849.1 Lepisosteus oculatus 29 1e-15 81.3
WERAM-Trv-0012 EHK19002 Trichoderma virens 27 2e-15 80.9
WERAM-Trr-0018 EGR46788 Trichoderma reesei 27 3e-15 80.1
WERAM-Cag-0026 CAG62123 Candida glabrata 29 3e-15 80.1
WERAM-Gag-0013 GGTG_03219T0 Gaeumannomyces graminis 27 5e-15 79.3
WERAM-Chg-0039 EAQ84978 Chaetomium globosum 28 5e-15 79.3
WERAM-Kop-0003 CAY67751 Komagataella pastoris 24 5e-15 79.3
Created Date 25-Jun-2016