WERAM Information

Tag Content
WERAM ID WERAM-Sot-0056
Ensembl Protein ID PGSC0003DMT400047656
Gene Name PGSC0003DMG400018520
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400018520 PGSC0003DMT400047656 PGSC0003DMT400047656
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT SET1 5.40e-29 102.2 362 483
Organism Solanum tuberosum
Domain Profile
  HMT SET1
              SET1.txt   2 elevakskikglglvakkeiekeelviEYvGevirsevadkrekeyekkeigvylfrldedaevvvdatkkgniarfi....nhsce.. 84 
                           +l+v++++++g++++a+  i+++++++EYvG+v   ++ ++re++ + ++++++l   d+++++v++++k++niarfi    nh ++  
  PGSC0003DMT400047656 362 PLMVVFDPKEGFTVEADAIIKDWTIITEYVGDV---DYLNNREAD-DGDSMMTLLTTNDPSKDLVICPDKHSNIARFInginNHTPAgk 446
                           799******************************...********9.9999****************************99999999899 PP
              SET1.txt  85 ..pNceakvvavdgekkiviyakraIekgeeltydYk 119
                             +N+++ ++ vdge++++++a+r+I+kge+l+ydY+
  PGSC0003DMT400047656 447 kkQNVKCARFDVDGECRVLLVANRDIRKGERLYYDYN 483
                           99**********************************7 PP
Protein Sequence
(Fasta)		MPSQNKLVFR LPGLHHKENS DKFRYNHCFR DTHACKAAPD LTFIPVLITK LCKRAWVLRD 60
AKKDVEVMPT SSTDIQRIEV EYFKDQAERK KTASMESVNT ESSPAEASLP TLVPGPSCIS 120
ITTATHDNTP ESFAVALPSR PTVVAVVSRP PLTQASLLRM GQLAHSAYHW AANLEAAVSG 180
MIHTALADAV TSLSTAIDTL ASKIVVLEIP DVSEMPQTTT GHGDRSEQII DLKFPLVQTK 240
IVDFFRIQRP SNSINEFSPG KDCQKKRKRG SSLVVSKKRR RLLPFNPTKD PTRRLEQMTS 300
LATALLAAGA DFSNELTYMP GMAPRSANHA ALEREGMQVL SKDDTETLQL CKNMMKQGEW 360
PPLMVVFDPK EGFTVEADAI IKDWTIITEY VGDVDYLNNR EADDGDSMMT LLTTNDPSKD 420
LVICPDKHSN IARFINGINN HTPAGKKKQN VKCARFDVDG ECRVLLVANR DIRKGERLYY 480
DYNGYENEYP TEHFV 495
Nucleotide Sequence
(Fasta)		ATGCCATCCC AGAACAAGTT AGTTTTTCGC CTGCCTGGGT TGCATCATAA AGAAAACTCG 60
GATAAATTTA GGTACAATCA TTGCTTCAGA GATACTCATG CGTGCAAGGC AGCGCCAGAC 120
CTCACTTTCA TTCCAGTATT AATCACGAAA CTGTGCAAAC GGGCTTGGGT ACTTCGAGAT 180
GCCAAGAAGG ATGTGGAAGT GATGCCCACA TCCTCTACTG ATATCCAGAG GATCGAAGTC 240
GAGTACTTTA AGGATCAAGC AGAAAGGAAG AAGACAGCCT CGATGGAGTC AGTGAACACA 300
GAATCATCAC CCGCAGAGGC ATCTTTGCCT ACTCTGGTCC CTGGGCCTTC ATGTATATCT 360
ATTACCACTG CTACTCATGA TAACACTCCA GAATCTTTTG CAGTTGCACT GCCTTCCAGA 420
CCTACTGTTG TTGCTGTTGT TTCCCGGCCT CCACTCACCC AGGCTTCCCT ACTCCGGATG 480
GGACAGCTGG CCCATTCTGC GTATCATTGG GCTGCCAACC TAGAGGCCGC TGTTTCGGGC 540
ATGATTCACA CTGCCCTCGC TGACGCTGTG ACATCACTAA GCACTGCCAT TGATACCCTA 600
GCATCCAAGA TAGTGGTGTT AGAGATTCCA GATGTGTCTG AGATGCCTCA GACCACCACC 660
GGACATGGGG ATAGATCGGA GCAGATAATC GATCTGAAAT TTCCTCTCGT GCAAACAAAG 720
ATTGTTGATT TTTTCCGGAT TCAGAGACCG TCAAACTCGA TTAATGAGTT TAGTCCAGGC 780
AAAGATTGCC AGAAAAAGAG AAAACGTGGT AGTAGCTTGG TAGTTTCAAA GAAGAGAAGA 840
AGATTATTGC CCTTCAATCC GACTAAGGAT CCTACCCGGA GATTAGAACA AATGACATCT 900
CTTGCTACTG CCTTGTTAGC AGCTGGAGCA GATTTCAGCA ATGAGCTTAC CTATATGCCA 960
GGCATGGCCC CACGATCAGC TAATCATGCA GCACTCGAGC GAGAGGGAAT GCAGGTATTA 1020
TCTAAAGACG ATACAGAAAC TTTACAGTTG TGCAAGAACA TGATGAAACA GGGTGAATGG 1080
CCACCACTCA TGGTTGTTTT TGATCCCAAG GAGGGATTTA CTGTTGAAGC AGATGCGATC 1140
ATAAAAGACT GGACAATAAT TACAGAGTAT GTTGGAGATG TTGATTACTT GAATAACCGG 1200
GAAGCTGATG ATGGAGATAG CATGATGACT CTTTTAACTA CTAATGATCC TTCAAAAGAC 1260
CTCGTCATTT GTCCTGACAA GCACAGTAAT ATTGCTCGCT TCATCAATGG GATAAACAAT 1320
CATACTCCCG CTGGGAAGAA GAAGCAGAAT GTGAAGTGTG CGAGGTTTGA TGTTGATGGT 1380
GAATGCCGTG TTTTATTGGT TGCAAACAGA GACATTCGAA AGGGAGAGAG GCTATATTAT 1440
GACTACAATG GTTATGAAAA TGAATATCCA ACTGAGCACT TTGTTTGA 1489
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0045 Solyc03g082860.2.1 Solanum lycopersicum 95 2e-143 506
WERAM-Viv-0102 VIT_16s0098g01510.t01 Vitis vinifera 77 3e-117 419
WERAM-Pot-0129 POPTR_0012s02530.1 Populus trichocarpa 76 2e-116 416
WERAM-Glm-0242 GLYMA18G52260.1 Glycine max 77 1e-113 407
WERAM-Thc-0039 EOY23615 Theobroma cacao 75 4e-111 399
WERAM-Orm-0019 OMERI02G01090.1 Oryza meridionalis 75 9e-110 394
WERAM-Prp-0117 EMJ20963 Prunus persica 74 1e-109 394
WERAM-Orni-0016 ONIVA02G01670.1 Oryza nivara 75 1e-109 394
WERAM-Mua-0074 GSMUA_Achr4P19780_001 Musa acuminata 73 3e-108 389
WERAM-Orb-0017 OBART02G01770.1 Oryza barthii 74 9e-108 387
WERAM-Orgl-0018 OGLUM02G01630.1 Oryza glumaepatula 74 1e-107 387
WERAM-Org-0017 ORGLA02G0016300.1 Oryza glaberrima 74 1e-107 387
WERAM-Orp-0018 OPUNC02G01240.1 Oryza punctata 74 2e-107 387
WERAM-Ori-0021 BGIOSGA007416-PA Oryza indica 74 2e-107 387
WERAM-Tra-0251 Traes_6AS_3BB0C3778.1 Triticum aestivum 74 8e-107 384
WERAM-Lep-0020 LPERR02G01570.1 Leersia perrieri 73 2e-106 383
WERAM-Aet-0004 EMT03211 Aegilops tauschii 73 2e-106 383
WERAM-Art-0128 AT5G24330.1 Arabidopsis thaliana 72 1e-105 380
WERAM-Bro-0133 Bo7g096970.1 Brassica oleracea 72 2e-104 377
WERAM-Arl-0094 fgenesh2_kg.6__ 2431__ AT5G24330.1 Arabidopsis lyrata 71 2e-104 377
WERAM-Met-0006 AES58731 Medicago truncatula 74 3e-104 376
WERAM-Hov-0029 MLOC_20462.1 Hordeum vulgare 72 4e-104 375
WERAM-Brr-0051 Bra009752.1-P Brassica rapa 72 5e-104 375
WERAM-Brd-0063 BRADI3G02220.1 Brachypodium distachyon 73 6e-104 375
WERAM-Sei-0071 Si017644m Setaria italica 71 2e-103 373
WERAM-Zem-0105 GRMZM2G305124_P01 Zea mays 71 3e-103 373
WERAM-Sob-0063 Sb04g001900.1 Sorghum bicolor 69 1e-102 370
WERAM-Orr-0015 ORUFI01G48490.1 Oryza rufipogon 65 2e-96 350
WERAM-Ors-0011 OS01T0965500-01 Oryza sativa 65 4e-96 349
WERAM-Tru-0048 TRIUR3_21302-P1 Triticum urartu 64 1e-95 347
WERAM-Orbr-0019 OB01G54220.1 Oryza brachyantha 64 2e-94 343
WERAM-Sem-0042 EFJ28497 Selaginella moellendorffii 59 5e-89 325
WERAM-Php-0094 PP1S403_14V6.1 Physcomitrella patens 60 9e-89 325
WERAM-Amt-0073 ERN19309 Amborella trichopoda 71 5e-81 299
Created Date 25-Jun-2016