WERAM Information

Tag Content
WERAM ID WERAM-Sot-0007
Ensembl Protein ID PGSC0003DMT400006487
Gene Name PGSC0003DMG400002529
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400002529 PGSC0003DMT400006487 PGSC0003DMT400006487
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Me_Reader_other 3.00e-57 218
Organism Solanum tuberosum
Domain Profile
  Me_Reader Me_Reader_other
Query: 14  FTLAEAMEMTTFFKGLKGKSISQELCQEFATKFSSSPFRTGKSLIKGEQVQSWFLDKKKP 73
           FTL+E ++M   +K L  +S+ ++ CQ  A+ FS S  R GKS I  +QVQ WF +K K 
Sbjct: 14  FTLSEIVDMENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEKLKH 73
Query: 74  KAAXXXXXXXXXXXXXXXXXXXXKRRGRKPKSKNTSSS-LVVYKKYDACGYTRLPECAYD 132
           ++                          +PKSK   S  L ++   +   Y      A  
Sbjct: 74  QS--------------------------QPKSKTLPSPPLQIHDLSNPSSYASNASNATF 107
Query: 133 MPQRPRVSAAE-MAKELTGLAFEALSAKDLAWYDVASFLNFRVLYTGELEVRVRFAGFGN 191
           +     V   +  A +L  LAFEA SA+D AWYDV+SFL +RVL TGELEVRVRF+GF N
Sbjct: 108 VGNSTFVQTRKGKASDLADLAFEAKSARDYAWYDVSSFLTYRVLRTGELEVRVRFSGFDN 167
Query: 192 EEDEWVNVKRGVRERSVPLEPSECVKLSVGDPVMCFREDEYLAVYGDSEVVEIQRNLHDN 251
             DEWVNVK  VRERS+P+EPSEC +++VGD ++CF+E E  A+Y D  V+ I+R +HD+
Sbjct: 168 RHDEWVNVKTSVRERSIPVEPSECGRVNVGDLLLCFQEREDQALYCDGHVLNIKRGIHDH 227
Query: 252 TRCTCIFVVRYDLDKAEEKITLDKMCCRP 280
            RC C+F+VRY+LD  EE + L+++C RP
Sbjct: 228 ARCNCVFLVRYELDNTEESLGLERICRRP 256
Protein Sequence
(Fasta)		MDDLMETDEE LMDFTLAEAM EMTTFFKGLK GKSISQELCQ EFATKFSSSP FRTGKSLIKG 60
EQVQSWFLDK KKPKAAEVPV DDYVEHVDDY EEPVVPKRRG RKPKSKNTSS SLVVYKKYDA 120
CGYTRLPECA YDMPQRPRVS AAEMAKELTG LAFEALSAKD LAWYDVASFL NFRVLYTGEL 180
EVRVRFAGFG NEEDEWVNVK RGVRERSVPL EPSECVKLSV GDPVMCFRED EYLAVYGDSE 240
VVEIQRNLHD NTRCTCIFVV RYDLDKAEEK ITLDKMCCRP NFTYNKNNNN DNTPSEIPLV 300
ESEEDRM 307
Nucleotide Sequence
(Fasta)		TTTTTTTCCC AAACAAAGTC ACAACTCTGC TTCTCTCTCA GGCAGACAGC AGCACAAAAT 60
CCCACAAAAA CACTCTCTCT CTCTCTTCTC TTATTCTGTG TTTGGTTTAC ACAGAAAAAA 120
AAAATGGATG ACTTGATGGA AACAGATGAA GAATTAATGG ATTTCACCTT AGCTGAGGCT 180
ATGGAAATGA CCACTTTCTT TAAAGGATTG AAAGGAAAAT CAATCAGTCA AGAGTTGTGT 240
CAAGAATTTG CTACCAAGTT TAGTTCTTCG CCATTTCGTA CTGGAAAATC TTTAATAAAA 300
GGGGAACAGG TGCAAAGTTG GTTTCTTGAT AAGAAAAAAC CAAAAGCAGC TGAAGTCCCT 360
GTTGATGATT ATGTAGAACA TGTTGATGAT TATGAAGAAC CTGTTGTTCC TAAACGACGA 420
GGAAGAAAAC CAAAATCTAA AAACACAAGT TCATCTCTGG TGGTCTACAA AAAATACGAT 480
GCTTGTGGTT ACACAAGACT CCCAGAATGT GCATATGACA TGCCTCAGAG GCCCAGAGTT 540
TCTGCAGCAG AGATGGCCAA AGAACTCACA GGGTTGGCTT TTGAAGCTCT GTCAGCAAAG 600
GATTTAGCTT GGTATGATGT GGCCTCATTT CTCAACTTCA GAGTTCTTTA CACGGGCGAG 660
CTTGAAGTTC GTGTAAGATT TGCTGGCTTT GGTAATGAAG AAGATGAATG GGTGAATGTT 720
AAAAGGGGAG TACGTGAACG TTCTGTTCCC TTAGAGCCCT CAGAATGTGT CAAGCTGAGC 780
GTCGGAGATC CTGTGATGTG CTTCAGGGAA GATGAATATC TCGCAGTATA TGGTGACTCA 840
GAGGTTGTGG AGATCCAAAG GAATCTACAT GATAATACAA GATGCACGTG CATCTTTGTC 900
GTCCGCTATG ACTTAGATAA GGCTGAGGAG AAAATTACAC TCGACAAGAT GTGTTGCAGA 960
CCAAACTTCA CCTATAACAA GAACAACAAC AACGACAACA CACCGAGTGA AATTCCACTA 1020
GTGGAGTCTG AGGAGGATAG GATGTAGTAA ATTCGTGTCA ATGAGCTTCA GATGCCAGAT 1080
GGTTAAACAA AGAAAGTACA CCTTAGTCAC TAATCATCCA AACTTGGGAT AGCAGGATAA 1140
AGTGTTCAAA ACTCTACTCG TGTATTACGC TGAATTGTGT GTCTTGTACA AGTTTCATGA 1200
ATACAATGGT GAATAACTGT AACTCGATGG TTGGTAGAAT CTTGAACAGT GATAAACTCA 1260
CTGGGCCAGC ACATCCGGGG CGTTGTGCTG GAATTTTGGA TGTTGGAAGC AATGTAATAT 1320
TTAGCATTCC CTTTGCTTGT TCTTCTTTTC TGCCCACTTT TCTATCTTGC CTTTGTCTGT 1380
CGGAAACAAC TTCTCTACCT CACAAAGGTA GGGGTAAGGT GTATGTATAT GATATATCCC 1440
ACCCTTTCCA CACCTCACTT GTGAATTGCA CTAGGTATGT AGTTGTTCTA TATTGCCTCT 1500
TTGCTGAT 1509
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0058 Solyc03g120940.2.1 Solanum lycopersicum 95 1e-137 486
WERAM-Viv-0062 VIT_09s0002g03660.t01 Vitis vinifera 45 2e-59 226
WERAM-Art-0011 AT1G15215.2 Arabidopsis thaliana 43 5e-57 218
WERAM-Pot-0006 POPTR_0001s19000.1 Populus trichocarpa 44 1e-56 217
WERAM-Thc-0076 EOY26911 Theobroma cacao 43 8e-56 214
WERAM-Brr-0130 Bra026155.1-P Brassica rapa 42 1e-53 207
WERAM-Bro-0092 Bo5g020650.1 Brassica oleracea 42 4e-53 205
WERAM-Glm-0091 GLYMA08G21560.5 Glycine max 41 3e-52 202
WERAM-Arl-0017 fgenesh1_pg.C_scaffold_1001378 Arabidopsis lyrata 42 8e-52 201
WERAM-Prp-0090 EMJ17222 Prunus persica 63 4e-48 189
WERAM-Met-0171 KEH18213 Medicago truncatula 40 9e-47 184
WERAM-Org-0096 ORGLA09G0048600.1 Oryza glaberrima 35 4e-43 172
WERAM-Orgl-0096 OGLUM09G07230.2 Oryza glumaepatula 35 7e-43 171
WERAM-Orni-0098 ONIVA09G05900.1 Oryza nivara 35 7e-43 171
WERAM-Ori-0106 BGIOSGA029938-PA Oryza indica 35 7e-43 171
WERAM-Orr-0103 ORUFI09G07320.1 Oryza rufipogon 35 1e-42 170
WERAM-Orm-0090 OMERI09G05210.2 Oryza meridionalis 35 1e-41 167
WERAM-Orbr-0105 OB09G14330.1 Oryza brachyantha 36 1e-41 167
WERAM-Orb-0100 OBART09G06730.1 Oryza barthii 33 3e-37 153
Created Date 25-Jun-2016