Tag |
Content |
WERAM ID |
WERAM-Orr-0119 |
Ensembl Protein ID |
ORUFI12G05460.1 |
Gene Name |
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Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
SIR2 |
3.70e-69 |
234.2 |
165 |
446 |
|
Organism |
Oryza rufipogon |
Domain Profile |
HDAC SIR2
SIR2.txt 3 lakllkkskkivvltGAGiStsaGIPDFRsseGlysklkkeelpspeaifdldffrkdpkv..fyalakelyp.lgsakPtktHyflaelekkg 93 l++++ +skk++vltGAG+St++GIPD+Rs++G ys+ ++++++++f+r+ +++ ++a++++ ++ + +a+P+ +Hy+la+le+ g ORUFI12G05460.1 165 LYRFIDQSKKLMVLTGAGMSTESGIPDYRSPNGAYSS-------GFKPLTHQEFVRSIRARrrYWARSYAGWRrFRRAQPNSAHYALASLERIG 251 67899*******************************9.......58899999*9999887778******************************* PP SIR2.txt 94 kllrlytQNiDgLerkaglkedklvelHGslatasCtkCkkefpreeikeklkak....................................... 148 +++ ++tQN+D+L+++ag+k velHGs++++ C++C+++++re ++e++k ORUFI12G05460.1 252 RVHSMVTQNVDRLHHRAGSK---PVELHGSVYEVACLDCGTSIDRESFQEQVKDLnpkwalaidslevgqpgsdksfgmqqrpdgdieidekfw 342 *******************7...*****************************9999************************************** PP SIR2.txt 149 ...ekvpkCekCkgvlkpdivffgenlpeefleeveedlkeadlllvlGtSlkvepvaslvkkavkkkvpvllvnleevkadkladlkllgdcd 239 +++p+C++C+gvlkpd+v+fg+n+pee++e+++e+++++d+llv+G++l+ +++++l++ a+++++p++ + ++e++ad++ +lk++++c+ ORUFI12G05460.1 343 eqdFDIPSCNQCGGVLKPDVVMFGDNVPEERAESTKEAARNCDALLVVGSALMTMSAFRLARLAHEANAPIAAITIGETRADSILSLKINARCG 436 ***9****************************************************************************************** PP SIR2.txt 240 evveellkll 249 e++ ++l+ ORUFI12G05460.1 437 EILPRILQMG 446 *****98865 PP
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Protein Sequence (Fasta) | MYIYIRLTTW AGLGPVGLIV LGLVFPLHVA LVYFPPNKKT KSPSSFAARH HVGRPPPPPP 60 PEREGLPDPP RQEGSNGGGG ARVARFGSGF SPQLCNFHAS VNNGLLHRRK IQLHFICSFR 120 SIQARYNHSS AVAPKDYCET YIQFLRDKQI VPDSDPPSAK DVDLLYRFID QSKKLMVLTG 180 AGMSTESGIP DYRSPNGAYS SGFKPLTHQE FVRSIRARRR YWARSYAGWR RFRRAQPNSA 240 HYALASLERI GRVHSMVTQN VDRLHHRAGS KPVELHGSVY EVACLDCGTS IDRESFQEQV 300 KDLNPKWALA IDSLEVGQPG SDKSFGMQQR PDGDIEIDEK FWEQDFDIPS CNQCGGVLKP 360 DVVMFGDNVP EERAESTKEA ARNCDALLVV GSALMTMSAF RLARLAHEAN APIAAITIGE 420 TRADSILSLK INARCGEILP RILQMGSLSV PNVS 454Protein Fasta Sequence
>ORUFI12G05460.1|SIR2|Oryza rufipogon MYIYIRLTTWAGLGPVGLIVLGLVFPLHVALVYFPPNKKTKSPSSFAARHHVGRPPPPPPPEREGLPDPPRQEGSNGGGGARVARFGSGFSPQLCNFHASVNNGLLHRRKIQLHFICSFRSIQARYNHSSAVAPKDYCETYIQFLRDKQIVPDSDPPSAKDVDLLYRFIDQSKKLMVLTGAGMSTESGIPDYRSPNGAYSSGFKPLTHQEFVRSIRARRRYWARSYAGWRRFRRAQPNSAHYALASLERIGRVHSMVTQNVDRLHHRAGSKPVELHGSVYEVACLDCGTSIDRESFQEQVKDLNPKWALAIDSLEVGQPGSDKSFGMQQRPDGDIEIDEKFWEQDFDIPSCNQCGGVLKPDVVMFGDNVPEERAESTKEAARNCDALLVVGSALMTMSAFRLARLAHEANAPIAAITIGETRADSILSLKINARCGEILPRILQMGSLSVPNVS
|
Nucleotide Sequence (Fasta) | ATGTACATAT ACATACGGTT GACCACTTGG GCTGGGCTGG GCCCCGTGGG CCTGATCGTC 60 CTTGGTCTCG TCTTCCCCCT CCACGTCGCC CTTGTTTATT TCCCACCAAA CAAAAAAACC 120 AAATCGCCGA GCAGCTTCGC GGCGAGGCAC CACGTCGGCC GGCCGCCGCC GCCGCCACCG 180 CCGGAGAGGG AGGGCCTCCC GGACCCTCCC CGCCAAGAAG GATCCAATGG CGGCGGGGGC 240 GCACGCGTCG CGCGCTTCGG CTCCGGATTT TCTCCTCAGT TATGCAACTT CCATGCGTCA 300 GTAAATAATG GACTTCTCCA CAGAAGGAAA ATACAACTCC ATTTTATATG CTCTTTTCGC 360 TCCATACAAG CAAGATATAA CCATTCGTCA GCTGTTGCAC CTAAGGACTA TTGCGAAACT 420 TACATCCAGT TTCTAAGAGA TAAACAGATA GTTCCTGATT CAGATCCTCC AAGTGCTAAG 480 GATGTGGACC TACTTTACCG GTTTATTGAT CAGAGTAAAA AACTCATGGT GTTAACTGGA 540 GCAGGAATGA GCACTGAATC AGGAATTCCT GATTATAGGA GCCCTAATGG TGCTTACAGT 600 TCTGGTTTTA AACCACTTAC TCATCAGGAG TTTGTTCGTT CTATTCGAGC CCGAAGGCGG 660 TACTGGGCTA GGAGCTATGC TGGATGGAGA AGGTTCAGGA GAGCACAACC AAACTCAGCC 720 CATTATGCTC TTGCATCACT GGAGAGAATT GGCCGGGTAC ACTCAATGGT TACTCAAAAC 780 GTGGATAGGT TGCATCATCG TGCTGGGAGT AAGCCAGTTG AATTGCATGG AAGTGTGTAT 840 GAGGTAGCAT GTTTAGACTG TGGTACATCC ATTGACCGAG AATCATTCCA GGAGCAGGTC 900 AAGGACCTCA ACCCAAAGTG GGCTCTAGCT ATTGACAGTT TGGAAGTAGG ACAACCGGGC 960 TCAGACAAAA GTTTCGGAAT GCAGCAGCGA CCTGATGGTG ATATTGAGAT TGATGAGAAG 1020 TTCTGGGAGC AAGATTTTGA TATTCCTAGT TGCAACCAAT GTGGTGGAGT GCTGAAACCT 1080 GATGTTGTGA TGTTTGGTGA TAATGTTCCT GAAGAGAGAG CTGAAAGCAC TAAGGAGGCT 1140 GCAAGAAATT GTGATGCTCT TCTAGTGGTT GGTTCAGCAC TAATGACAAT GTCTGCTTTT 1200 AGGCTCGCAA GGCTTGCACA TGAAGCGAAT GCTCCAATTG CAGCGATCAC CATTGGTGAG 1260 ACCAGGGCTG ATAGTATTTT GTCCTTGAAA ATTAATGCAA GATGTGGGGA GATACTGCCC 1320 AGAATACTTC AGATGGGAAG TCTATCTGTA CCAAATGTGA GTTAA
1366Nucleotide Fasta Sequence
>ORUFI12G05460.1|SIR2|Oryza rufipogon ATGTACATATACATACGGTTGACCACTTGGGCTGGGCTGGGCCCCGTGGGCCTGATCGTCCTTGGTCTCGTCTTCCCCCTCCACGTCGCCCTTGTTTATTTCCCACCAAACAAAAAAACCAAATCGCCGAGCAGCTTCGCGGCGAGGCACCACGTCGGCCGGCCGCCGCCGCCGCCACCGCCGGAGAGGGAGGGCCTCCCGGACCCTCCCCGCCAAGAAGGATCCAATGGCGGCGGGGGCGCACGCGTCGCGCGCTTCGGCTCCGGATTTTCTCCTCAGTTATGCAACTTCCATGCGTCAGTAAATAATGGACTTCTCCACAGAAGGAAAATACAACTCCATTTTATATGCTCTTTTCGCTCCATACAAGCAAGATATAACCATTCGTCAGCTGTTGCACCTAAGGACTATTGCGAAACTTACATCCAGTTTCTAAGAGATAAACAGATAGTTCCTGATTCAGATCCTCCAAGTGCTAAGGATGTGGACCTACTTTACCGGTTTATTGATCAGAGTAAAAAACTCATGGTGTTAACTGGAGCAGGAATGAGCACTGAATCAGGAATTCCTGATTATAGGAGCCCTAATGGTGCTTACAGTTCTGGTTTTAAACCACTTACTCATCAGGAGTTTGTTCGTTCTATTCGAGCCCGAAGGCGGTACTGGGCTAGGAGCTATGCTGGATGGAGAAGGTTCAGGAGAGCACAACCAAACTCAGCCCATTATGCTCTTGCATCACTGGAGAGAATTGGCCGGGTACACTCAATGGTTACTCAAAACGTGGATAGGTTGCATCATCGTGCTGGGAGTAAGCCAGTTGAATTGCATGGAAGTGTGTATGAGGTAGCATGTTTAGACTGTGGTACATCCATTGACCGAGAATCATTCCAGGAGCAGGTCAAGGACCTCAACCCAAAGTGGGCTCTAGCTATTGACAGTTTGGAAGTAGGACAACCGGGCTCAGACAAAAGTTTCGGAATGCAGCAGCGACCTGATGGTGATATTGAGATTGATGAGAAGTTCTGGGAGCAAGATTTTGATATTCCTAGTTGCAACCAATGTGGTGGAGTGCTGAAACCTGATGTTGTGATGTTTGGTGATAATGTTCCTGAAGAGAGAGCTGAAAGCACTAAGGAGGCTGCAAGAAATTGTGATGCTCTTCTAGTGGTTGGTTCAGCACTAATGACAATGTCTGCTTTTAGGCTCGCAAGGCTTGCACATGAAGCGAATGCTCCAATTGCAGCGATCACCATTGGTGAGACCAGGGCTGATAGTATTTTGTCCTTGAAAATTAATGCAAGATGTGGGGAGATACTGCCCAGAATACTTCAGATGGGAAGTCTATCTGTACCAAATGTGAGTTAA
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Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |