Tag |
Content |
WERAM ID |
WERAM-Org-0102 |
Ensembl Protein ID |
ORGLA10G0160100.1 |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HMT |
SET2 |
4.00e-48 |
163.1 |
163 |
339 |
HMT |
SET1 |
6.70e-34 |
117.2 |
93 |
279 |
|
Organism |
Oryza glaberrima |
Domain Profile |
HMT SET2
SET2.txt 2 kveliktekkGyGlrakeeikkdefileYvGevidekeakkRlkeyeeekvkdfYlleldkdeviDatkkGnlaRfinhsCePncetqkwtv 93 k++liktek G G++a+e+ikk+ef++eYvGevid + +++Rl ++++++ ++fYl e+++++viDat+kGn++RfinhsCePn+e+qkwtv ORGLA10G0160100.1 163 KTKLIKTEKCGNGVVAEEDIKKGEFVIEYVGEVIDDRTCEQRLWKMKRQGDTNFYLCEVSSNMVIDATNKGNMSRFINHSCEPNTEMQKWTV 254 789***************************************************************************************** PP SET2.txt 94 egelrvglfakkkikkgeeltfdYn 118 ege+rvg+fa ++ik+geelt+dY+ ORGLA10G0160100.1 255 EGETRVGIFALRDIKTGEELTYDYK 279 ************************6 PP SET2.txt 23 kdefileYvGevid 36 +++++ + +Ge+++ ORGLA10G0160100.1 326 RKTYLENCIGEIVR 339 45677778888876 PP
HMT SET1
SET1.txt 44 ekeyekkeigvylfrldedaevvvdatkkgniarf 78 ++y +++ y+ r+ + + + + + ++ + ORGLA10G0160100.1 93 SNYYVPIKRNAYMTRKRVEDDGIFCSCTPSGSSAT 127 45788888889999888887777776655555444 PP SET1.txt 6 akskikglglvakkeiekeelviEYvGevirsevadkrekeyekkeig.vylfrldedaevvvdatkkgniarfinhscepNceakvvavdg 96 k ++ g g+va+++i+k+e+viEYvGevi + ++r + ++++ + yl ++ ++ +v+dat+kgn++rfinhscepN e + +v+g ORGLA10G0160100.1 167 IKTEKCGNGVVAEEDIKKGEFVIEYVGEVIDDRTCEQRLWKMKRQGDTnFYLCEVSSN--MVIDATNKGNMSRFINHSCEPNTEMQKWTVEG 256 5667789*****************************9999988888777999999999..******************************** PP SET1.txt 97 ekkiviyakraIekgeeltydYk 119 e++++i+a r+I++geeltydYk ORGLA10G0160100.1 257 ETRVGIFALRDIKTGEELTYDYK 279 **********************7 PP
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Protein Sequence (Fasta) | MIGRYGHPPN PLLLLRPHLA SFLRRLPPLR HCSLAYGLEL VADPRHRRDL CLPPMPRPAK 60 IRKKHENVFD QLIKAIKAPV DFDLPPVLKE WKSNYYVPIK RNAYMTRKRV EDDGIFCSCT 120 PSGSSATCDK DCQCGMLFSC CSSTCKCENK CANKPFQHRT LRKTKLIKTE KCGNGVVAEE 180 DIKKGEFVIE YVGEVIDDRT CEQRLWKMKR QGDTNFYLCE VSSNMVIDAT NKGNMSRFIN 240 HSCEPNTEMQ KWTVEGETRV GIFALRDIKT GEELTYDYKF VQFGADQDCH CGSSNCRKML 300 GITKPVNSIV LHNGNLSQDQ HVRKKRKTYL ENCIGEIVRL WHRRHSMYLA ASIYDFNERN 360 GIHTLLFTDA TIEEFDLTEE DWDFLPDPDG PEEV 394Protein Fasta Sequence
>ORGLA10G0160100.1|SET1|Oryza glaberrima MIGRYGHPPNPLLLLRPHLASFLRRLPPLRHCSLAYGLELVADPRHRRDLCLPPMPRPAKIRKKHENVFDQLIKAIKAPVDFDLPPVLKEWKSNYYVPIKRNAYMTRKRVEDDGIFCSCTPSGSSATCDKDCQCGMLFSCCSSTCKCENKCANKPFQHRTLRKTKLIKTEKCGNGVVAEEDIKKGEFVIEYVGEVIDDRTCEQRLWKMKRQGDTNFYLCEVSSNMVIDATNKGNMSRFINHSCEPNTEMQKWTVEGETRVGIFALRDIKTGEELTYDYKFVQFGADQDCHCGSSNCRKMLGITKPVNSIVLHNGNLSQDQHVRKKRKTYLENCIGEIVRLWHRRHSMYLAASIYDFNERNGIHTLLFTDATIEEFDLTEEDWDFLPDPDGPEEV
|
Nucleotide Sequence (Fasta) | ATGATAGGTA GGTACGGACA TCCCCCAAAT CCTCTTCTTC TGCTCCGACC TCACCTCGCC 60 TCCTTCCTCC GCCGACTCCC TCCCCTCCGC CATTGCAGCC TCGCCTACGG CCTTGAGCTC 120 GTCGCCGATC CCCGCCACCG CCGCGACCTC TGCCTGCCCC CCATGCCTCG GCCGGCGAAA 180 ATCAGGAAAA AACATGAAAA TGTGTTTGAT CAATTGATCA AGGCGATAAA AGCTCCTGTG 240 GACTTTGATC TGCCGCCTGT ATTGAAAGAA TGGAAATCAA ATTACTATGT GCCAATTAAG 300 CGGAATGCTT ATATGACTCG GAAACGCGTT GAGGATGATG GCATTTTTTG TTCCTGTACC 360 CCTTCTGGAT CATCCGCAAC TTGTGACAAA GATTGCCAAT GCGGGATGTT GTTCTCTTGT 420 TGTTCGTCGA CCTGTAAATG TGAGAATAAA TGTGCTAACA AACCGTTCCA GCATAGGACT 480 TTGAGGAAAA CCAAATTAAT TAAGACAGAG AAATGTGGCA ATGGGGTGGT AGCTGAGGAA 540 GATATTAAAA AAGGAGAATT TGTAATCGAA TATGTTGGAG AAGTTATTGA TGACAGAACA 600 TGTGAGCAGA GACTATGGAA AATGAAGAGG CAGGGTGACA CTAATTTCTA TCTTTGTGAG 660 GTCAGTAGTA ATATGGTGAT CGACGCGACC AACAAAGGAA ACATGTCGCG CTTCATAAAT 720 CATAGCTGTG AGCCAAACAC AGAGATGCAG AAATGGACTG TTGAGGGAGA GACAAGAGTT 780 GGAATTTTTG CTCTTCGTGA CATAAAAACG GGGGAGGAGC TGACCTATGA TTACAAGTTT 840 GTCCAATTTG GAGCTGATCA AGATTGTCAC TGTGGATCTT CAAACTGTCG AAAAATGCTT 900 GGCATCACAA AGCCTGTTAA CTCAATTGTA CTTCATAATG GAAATCTGTC ACAAGATCAG 960 CATGTCCGGA AGAAAAGAAA GACATATTTG GAGAATTGTA TTGGGGAGAT TGTCCGTTTG 1020 TGGCATCGAC GTCACAGCAT GTATCTCGCA GCAAGTATAT ATGACTTCAA TGAGCGCAAT 1080 GGAATACATA CATTGTTGTT TACCGATGCA ACTATTGAAG AATTTGATTT GACAGAGGAA 1140 GATTGGGACT TCTTACCGGA TCCAGATGGT CCTGAGGAAG TGTGA
1186Nucleotide Fasta Sequence
>ORGLA10G0160100.1|SET1|Oryza glaberrima ATGATAGGTAGGTACGGACATCCCCCAAATCCTCTTCTTCTGCTCCGACCTCACCTCGCCTCCTTCCTCCGCCGACTCCCTCCCCTCCGCCATTGCAGCCTCGCCTACGGCCTTGAGCTCGTCGCCGATCCCCGCCACCGCCGCGACCTCTGCCTGCCCCCCATGCCTCGGCCGGCGAAAATCAGGAAAAAACATGAAAATGTGTTTGATCAATTGATCAAGGCGATAAAAGCTCCTGTGGACTTTGATCTGCCGCCTGTATTGAAAGAATGGAAATCAAATTACTATGTGCCAATTAAGCGGAATGCTTATATGACTCGGAAACGCGTTGAGGATGATGGCATTTTTTGTTCCTGTACCCCTTCTGGATCATCCGCAACTTGTGACAAAGATTGCCAATGCGGGATGTTGTTCTCTTGTTGTTCGTCGACCTGTAAATGTGAGAATAAATGTGCTAACAAACCGTTCCAGCATAGGACTTTGAGGAAAACCAAATTAATTAAGACAGAGAAATGTGGCAATGGGGTGGTAGCTGAGGAAGATATTAAAAAAGGAGAATTTGTAATCGAATATGTTGGAGAAGTTATTGATGACAGAACATGTGAGCAGAGACTATGGAAAATGAAGAGGCAGGGTGACACTAATTTCTATCTTTGTGAGGTCAGTAGTAATATGGTGATCGACGCGACCAACAAAGGAAACATGTCGCGCTTCATAAATCATAGCTGTGAGCCAAACACAGAGATGCAGAAATGGACTGTTGAGGGAGAGACAAGAGTTGGAATTTTTGCTCTTCGTGACATAAAAACGGGGGAGGAGCTGACCTATGATTACAAGTTTGTCCAATTTGGAGCTGATCAAGATTGTCACTGTGGATCTTCAAACTGTCGAAAAATGCTTGGCATCACAAAGCCTGTTAACTCAATTGTACTTCATAATGGAAATCTGTCACAAGATCAGCATGTCCGGAAGAAAAGAAAGACATATTTGGAGAATTGTATTGGGGAGATTGTCCGTTTGTGGCATCGACGTCACAGCATGTATCTCGCAGCAAGTATATATGACTTCAATGAGCGCAATGGAATACATACATTGTTGTTTACCGATGCAACTATTGAAGAATTTGATTTGACAGAGGAAGATTGGGACTTCTTACCGGATCCAGATGGTCCTGAGGAAGTGTGA
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Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |