WERAM Information


Tag Content
WERAM ID WERAM-Mua-0053
Ensembl Protein ID GSMUA_Achr3P06240_001
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GSMUA_Achr3G06240_001 GSMUA_Achr3T06240_001 GSMUA_Achr3P06240_001
Status Unreviewed
Classification
Type Family E-value Score Start End
HAT HAT_other 0.11 32
Organism Musa acuminata
Domain Profile
  HAT HAT_other

Query: 206 KYWLRGPKAATTEVFAELPRYPDNIRRTPGGEYWVALNGEKIDLNGAAKAEAATERPVAM 265
++W+ T + ELPR+PD+ P Y L EK D++ + T R
Sbjct: 196 RHWIESNAITTGKAVEELPRFPDD----PKCRYLCELQDEKSDMSVEEFWDTLTYR---- 247
Query: 266 RLSAEGKLV 274
+ + GKLV
Sbjct: 248 QECSSGKLV 256
Database: Schizosaccharomyces_pombe.ASM294v2.31.pep.all.fa
Posted date: Jun 9, 2016 10:46 AM
Number of letters in database: 2,387,764
Number of sequences in database: 5146

Lambda K H
0.320 0.139 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5146
Number of Hits to DB: 1,190,188
Number of extensions: 43584
Number of successful extensions: 68
Number of sequences better than 10.0: 1
Number of HSP's gapped: 68
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 2,387,764
Length adjustment: 88
Effective length of query: 222
Effective length of database: 1,934,916
Effective search space: 429551352
Effective search space used: 429551352
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)

Protein Sequence
(Fasta)
MNRLEGLERL ALRTVVGPES LAFDRHGRGP YTGVSGGRIL MWQDKGRGWT GYAVNAANRR 60
RECEGSDVSM ERVCGRPLGL QFHHATGVLY VADAYFGLLA VGPTGGAAEL LAASAEGVPF 120
NFTNGVDVDQ KTGVVYFTDS STQYQRQDYI LAVVTGDSTG RLMKYDPRTR KVTVLRRGLR 180
FPNGVALSGD GSFLLFAETG TCRVIKYWLR GPKAATTEVF AELPRYPDNI RRTPGGEYWV 240
ALNGEKIDLN GAAKAEAATE RPVAMRLSAE GKLVEALDGE ELASVSEVAE ESGSVWVGSV 300
EMPYVDVYKL
Nucleotide Sequence
(Fasta)
AAACGCTTCT GGATTCCGAA CCTTTCCACG TCCACCATGA GACTGGCTCT CCTCTTCGTT 60
GTCCTCATGG CGATCCTTTC GTGCACCGCT TGTTACAAGG AGATAGCCAT GAACAGGCTT 120
GAAGGGTTGG AGAGGCTTGC TTTAAGGACG GTGGTCGGGC CCGAGAGCCT GGCCTTCGAC 180
CGCCACGGCC GCGGCCCCTA CACCGGCGTC TCCGGCGGCC GCATCCTCAT GTGGCAAGAC 240
AAAGGCCGCG GCTGGACTGG GTACGCCGTC AATGCTGCAA ACAGGAGGAG GGAATGCGAG 300
GGTTCCGACG TCTCGATGGA GAGGGTGTGC GGGAGGCCAT TAGGGTTGCA GTTCCACCAC 360
GCAACCGGGG TTCTCTACGT CGCCGACGCC TACTTCGGCC TGCTGGCCGT CGGACCGACG 420
GGAGGAGCGG CAGAGCTGCT CGCCGCGAGC GCCGAAGGAG TGCCCTTCAA CTTCACCAAC 480
GGCGTGGACG TAGACCAGAA GACCGGGGTG GTGTACTTCA CTGATAGCAG CACGCAGTAC 540
CAGAGGCAGG ATTACATATT GGCCGTCGTG ACCGGCGACT CGACCGGACG ACTGATGAAG 600
TACGATCCGA GAACAAGAAA GGTGACGGTG CTGCGGCGGG GCCTCCGCTT CCCCAACGGA 660
GTCGCCTTAA GCGGCGACGG AAGCTTCCTC CTCTTTGCGG AGACGGGGAC TTGCAGGGTC 720
ATCAAGTACT GGCTTCGCGG CCCCAAGGCG GCCACCACGG AGGTGTTCGC GGAGCTCCCG 780
AGATACCCTG ACAACATCCG GAGGACGCCG GGGGGTGAGT ACTGGGTGGC GCTGAACGGC 840
GAGAAGATCG ACCTCAACGG TGCCGCCAAG GCGGAGGCAG CGACGGAGCG CCCGGTGGCG 900
ATGAGACTGA GCGCGGAGGG GAAGCTGGTG GAGGCGTTGG ACGGAGAGGA ATTGGCTTCT 960
GTGAGCGAAG TGGCGGAAGA GAGCGGAAGC GTATGGGTTG GTTCCGTTGA AATGCCTTAC 1020
GTCGATGTGT ACAAGCTCTA GCTTCATGTA TGCTTTAATG TTCGTACCAC CATCACCATG 1080
CAAGCTTTAA TGTT 1095
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orgl-0075 OGLUM07G17310.1 Oryza glumaepatula 51 6e-69 258
WERAM-Ori-0087 BGIOSGA025896-PA Oryza indica 51 6e-69 258
WERAM-Ors-0070 OS07T0543600-00 Oryza sativa 51 8e-69 257
WERAM-Orl-0109 KN542308.1_FGP001 Oryza longistaminata 51 1e-68 257
WERAM-Orp-0075 OPUNC07G16480.1 Oryza punctata 51 2e-68 256
WERAM-Orm-0074 OMERI07G14570.1 Oryza meridionalis 51 3e-68 256
WERAM-Orni-0077 ONIVA07G16000.1 Oryza nivara 50 1e-67 253
WERAM-Lep-0078 LPERR07G15140.1 Leersia perrieri 49 6e-67 251
WERAM-Aet-0065 EMT00978 Aegilops tauschii 51 8e-66 247
WERAM-Sot-0051 PGSC0003DMT400044684 Solanum tuberosum 45 2e-60 229
WERAM-Tra-0346 TRAES3BF072500110CFD_t1 Triticum aestivum 52 1e-59 227
WERAM-Orb-0078 OBART07G17700.1 Oryza barthii 48 1e-57 220
WERAM-Tru-0092 TRIUR3_32970-P1 Triticum urartu 46 2e-53 206
WERAM-Orr-0080 ORUFI07G18380.1 Oryza rufipogon 52 5e-42 169
Created Date 25-Jun-2016