Tag |
Content |
WERAM ID |
WERAM-Mua-0053 |
Ensembl Protein ID |
GSMUA_Achr3P06240_001 |
Gene Name |
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Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HAT |
HAT_other |
0.11 |
32 |
|
|
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Organism |
Musa acuminata |
Domain Profile |
HAT HAT_other
Query: 206 KYWLRGPKAATTEVFAELPRYPDNIRRTPGGEYWVALNGEKIDLNGAAKAEAATERPVAM 265 ++W+ T + ELPR+PD+ P Y L EK D++ + T R Sbjct: 196 RHWIESNAITTGKAVEELPRFPDD----PKCRYLCELQDEKSDMSVEEFWDTLTYR---- 247 Query: 266 RLSAEGKLV 274 + + GKLV Sbjct: 248 QECSSGKLV 256 Database: Schizosaccharomyces_pombe.ASM294v2.31.pep.all.fa Posted date: Jun 9, 2016 10:46 AM Number of letters in database: 2,387,764 Number of sequences in database: 5146 Lambda K H 0.320 0.139 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 5146 Number of Hits to DB: 1,190,188 Number of extensions: 43584 Number of successful extensions: 68 Number of sequences better than 10.0: 1 Number of HSP's gapped: 68 Number of HSP's successfully gapped: 1 Length of query: 310 Length of database: 2,387,764 Length adjustment: 88 Effective length of query: 222 Effective length of database: 1,934,916 Effective search space: 429551352 Effective search space used: 429551352 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 54 (25.4 bits)
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Protein Sequence (Fasta) | MNRLEGLERL ALRTVVGPES LAFDRHGRGP YTGVSGGRIL MWQDKGRGWT GYAVNAANRR 60 RECEGSDVSM ERVCGRPLGL QFHHATGVLY VADAYFGLLA VGPTGGAAEL LAASAEGVPF 120 NFTNGVDVDQ KTGVVYFTDS STQYQRQDYI LAVVTGDSTG RLMKYDPRTR KVTVLRRGLR 180 FPNGVALSGD GSFLLFAETG TCRVIKYWLR GPKAATTEVF AELPRYPDNI RRTPGGEYWV 240 ALNGEKIDLN GAAKAEAATE RPVAMRLSAE GKLVEALDGE ELASVSEVAE ESGSVWVGSV 300 EMPYVDVYKL Protein Fasta Sequence
>GSMUA_Achr3P06240_001|HAT_other|Musa acuminata MNRLEGLERLALRTVVGPESLAFDRHGRGPYTGVSGGRILMWQDKGRGWTGYAVNAANRRRECEGSDVSMERVCGRPLGLQFHHATGVLYVADAYFGLLAVGPTGGAAELLAASAEGVPFNFTNGVDVDQKTGVVYFTDSSTQYQRQDYILAVVTGDSTGRLMKYDPRTRKVTVLRRGLRFPNGVALSGDGSFLLFAETGTCRVIKYWLRGPKAATTEVFAELPRYPDNIRRTPGGEYWVALNGEKIDLNGAAKAEAATERPVAMRLSAEGKLVEALDGEELASVSEVAEESGSVWVGSVEMPYVDVYKL
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Nucleotide Sequence (Fasta) | AAACGCTTCT GGATTCCGAA CCTTTCCACG TCCACCATGA GACTGGCTCT CCTCTTCGTT 60 GTCCTCATGG CGATCCTTTC GTGCACCGCT TGTTACAAGG AGATAGCCAT GAACAGGCTT 120 GAAGGGTTGG AGAGGCTTGC TTTAAGGACG GTGGTCGGGC CCGAGAGCCT GGCCTTCGAC 180 CGCCACGGCC GCGGCCCCTA CACCGGCGTC TCCGGCGGCC GCATCCTCAT GTGGCAAGAC 240 AAAGGCCGCG GCTGGACTGG GTACGCCGTC AATGCTGCAA ACAGGAGGAG GGAATGCGAG 300 GGTTCCGACG TCTCGATGGA GAGGGTGTGC GGGAGGCCAT TAGGGTTGCA GTTCCACCAC 360 GCAACCGGGG TTCTCTACGT CGCCGACGCC TACTTCGGCC TGCTGGCCGT CGGACCGACG 420 GGAGGAGCGG CAGAGCTGCT CGCCGCGAGC GCCGAAGGAG TGCCCTTCAA CTTCACCAAC 480 GGCGTGGACG TAGACCAGAA GACCGGGGTG GTGTACTTCA CTGATAGCAG CACGCAGTAC 540 CAGAGGCAGG ATTACATATT GGCCGTCGTG ACCGGCGACT CGACCGGACG ACTGATGAAG 600 TACGATCCGA GAACAAGAAA GGTGACGGTG CTGCGGCGGG GCCTCCGCTT CCCCAACGGA 660 GTCGCCTTAA GCGGCGACGG AAGCTTCCTC CTCTTTGCGG AGACGGGGAC TTGCAGGGTC 720 ATCAAGTACT GGCTTCGCGG CCCCAAGGCG GCCACCACGG AGGTGTTCGC GGAGCTCCCG 780 AGATACCCTG ACAACATCCG GAGGACGCCG GGGGGTGAGT ACTGGGTGGC GCTGAACGGC 840 GAGAAGATCG ACCTCAACGG TGCCGCCAAG GCGGAGGCAG CGACGGAGCG CCCGGTGGCG 900 ATGAGACTGA GCGCGGAGGG GAAGCTGGTG GAGGCGTTGG ACGGAGAGGA ATTGGCTTCT 960 GTGAGCGAAG TGGCGGAAGA GAGCGGAAGC GTATGGGTTG GTTCCGTTGA AATGCCTTAC 1020 GTCGATGTGT ACAAGCTCTA GCTTCATGTA TGCTTTAATG TTCGTACCAC CATCACCATG 1080 CAAGCTTTAA TGTT
1095Nucleotide Fasta Sequence
>GSMUA_Achr3P06240_001|HAT_other|Musa acuminata AAACGCTTCTGGATTCCGAACCTTTCCACGTCCACCATGAGACTGGCTCTCCTCTTCGTTGTCCTCATGGCGATCCTTTCGTGCACCGCTTGTTACAAGGAGATAGCCATGAACAGGCTTGAAGGGTTGGAGAGGCTTGCTTTAAGGACGGTGGTCGGGCCCGAGAGCCTGGCCTTCGACCGCCACGGCCGCGGCCCCTACACCGGCGTCTCCGGCGGCCGCATCCTCATGTGGCAAGACAAAGGCCGCGGCTGGACTGGGTACGCCGTCAATGCTGCAAACAGGAGGAGGGAATGCGAGGGTTCCGACGTCTCGATGGAGAGGGTGTGCGGGAGGCCATTAGGGTTGCAGTTCCACCACGCAACCGGGGTTCTCTACGTCGCCGACGCCTACTTCGGCCTGCTGGCCGTCGGACCGACGGGAGGAGCGGCAGAGCTGCTCGCCGCGAGCGCCGAAGGAGTGCCCTTCAACTTCACCAACGGCGTGGACGTAGACCAGAAGACCGGGGTGGTGTACTTCACTGATAGCAGCACGCAGTACCAGAGGCAGGATTACATATTGGCCGTCGTGACCGGCGACTCGACCGGACGACTGATGAAGTACGATCCGAGAACAAGAAAGGTGACGGTGCTGCGGCGGGGCCTCCGCTTCCCCAACGGAGTCGCCTTAAGCGGCGACGGAAGCTTCCTCCTCTTTGCGGAGACGGGGACTTGCAGGGTCATCAAGTACTGGCTTCGCGGCCCCAAGGCGGCCACCACGGAGGTGTTCGCGGAGCTCCCGAGATACCCTGACAACATCCGGAGGACGCCGGGGGGTGAGTACTGGGTGGCGCTGAACGGCGAGAAGATCGACCTCAACGGTGCCGCCAAGGCGGAGGCAGCGACGGAGCGCCCGGTGGCGATGAGACTGAGCGCGGAGGGGAAGCTGGTGGAGGCGTTGGACGGAGAGGAATTGGCTTCTGTGAGCGAAGTGGCGGAAGAGAGCGGAAGCGTATGGGTTGGTTCCGTTGAAATGCCTTACGTCGATGTGTACAAGCTCTAGCTTCATGTATGCTTTAATGTTCGTACCACCATCACCATGCAAGCTTTAATGTT
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Sequence Source |
Ensembl |
Orthology |
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Created Date |
25-Jun-2016 |