WERAM Information

Tag Content
WERAM ID WERAM-Zem-0152
Ensembl Protein ID GRMZM5G838910_P01
Gene Name cl43997_1 ZEAMMB73_317998
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GRMZM5G838910 GRMZM5G838910_T01 GRMZM5G838910_P01
GRMZM5G838910 GRMZM5G838910_T02 GRMZM5G838910_P02
GRMZM5G838910 GRMZM5G838910_T03 GRMZM5G838910_P03
GRMZM5G838910 GRMZM5G838910_T04 GRMZM5G838910_P04
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Tudor 0.042 15.7 195 230
Organism Zea mays
Domain Profile
  Me_Reader Tudor
          Tudor.txt   2 skvGlrVvakwssdGyfYsgkiVvkghrvesgeeyysiky 41 
                          +G +V+ +w  d+ fY+++i    +  ++++  y+  y
  GRMZM5G838910_P01 195 PLIGRKVMTRWPDDNSFYEAEI----TDYDASKDIYTLVY 230
                        5689******************....55554444444333 PP
Protein Sequence
(Fasta)		MGTLLSLHVI NLFTLVGLDF MESCKGLNSL SQEKESLITE LRKELQVSDK EHRELLNKVN 60
GDDIIRRIRK WRESTGGLMI NLVNNSQRTH DPIPSPTTSA RKRQKMSQPI LSACVPAPSA 120
MHSQPLTAPM QPSSSGAKKG AQPGTKVKKT KPGQKIPGGS AVKSMPSSAG PGGRGTIINR 180
NMSAGLPPES SQLNPLIGRK VMTRWPDDNS FYEAEITDYD ASKDIYTLVY DINTADETWE 240
WVDFKEMAPE DIRWDGEEPD LNLIGRGAPV HGMKSSSRGG PMSGTGRDRG PQKNSFKKDY 300
PSQNGIGKKS VDYIEILHTE TLIKEVERVF SSANPDPLEM ERAKKALKEH EQSLIDAIAR 360
LAEASDDDRV RSLEYNRGWR NQHGGRYADD MTMDGHMAGD ADAM 404
Nucleotide Sequence
(Fasta)		ACCCGTTGTC GCCTTCCCTC GCCTCCCGCA CGCCAGTCCC TGCTGCCCTG CCCTCTTCCG 60
CCGCGTCGTC CCCTCCTACG TTCCCCTCTC CCTCGGTCCG CCTAGATCTC GCCAGGGTTT 120
GCCGCGTCTC GTCTTGATTT TTGCTCCGGA ACCAGGGCTC CATCGGGGCA GAGAGGCAGG 180
AGGGGTAGGC CATCCCGGAA AGTGGCGGAT CTGGGTGTTA TCGGAGGAAG AGCATCGTGT 240
AGCGTTTCTG TCGGTGGCAG GCATCGACGA GGTGTGATTT AGAAGGCATT TGTGAGTACG 300
GCATGGACTG CGTCGGAGCT GTGGACAGCA GCGGAACCGA TGATGATCTT CCACAATCAT 360
ATCAGAACAG CAGAGGCATG AAAGGCAGTG GACGCATCAC TGGTAATGGA AGAGATAGTG 420
TTGGTGCTTC TCTGTATACT AGAGTTCAAC CTCAGACAGA CATGGAAACA CAAATACATG 480
AGCTTGAGCA AGAAGCATAT TGTTCAGTTC TTAGAGCATT CAAGGCTCAA TCTGATGCTA 540
TAACATGGGT ACACTCTTGT CTCTTCATGT AATTAATTTA TTTACTCTGG TTGGCCTAGA 600
TTTCATGGAG TCTTGTAAGG GTTTGAATTC ATTGTCTCAG GAAAAAGAAA GTCTCATTAC 660
TGAGCTTAGG AAGGAGCTAC AAGTATCTGA CAAGGAACAC AGGGAGTTGC TAAACAAAGT 720
TAATGGCGAT GATATTATTC GAAGAATAAG GAAATGGAGA GAGTCAACTG GTGGGCTTAT 780
GATTAATTTG GTGAATAATT CTCAGCGTAC ACATGACCCT ATTCCCAGCC CTACGACATC 840
TGCTCGCAAG AGGCAAAAGA TGTCTCAACC CATTCTCTCT GCATGTGTAC CTGCACCATC 900
TGCTATGCAT TCACAGCCTT TAACTGCACC GATGCAACCA TCATCTTCAG GAGCAAAAAA 960
GGGAGCTCAA CCCGGCACAA AAGTGAAGAA GACCAAACCA GGCCAGAAGA TACCTGGTGG 1020
CTCTGCAGTC AAATCTATGC CATCTTCTGC TGGTCCTGGT GGGCGAGGAA CTATTATCAA 1080
TAGGAATATG TCTGCTGGCC TTCCACCTGA AAGTTCACAA TTAAATCCAT TAATTGGTCG 1140
TAAAGTCATG ACTCGGTGGC CTGACGATAA TAGCTTTTAT GAAGCTGAAA TAACTGACTA 1200
TGATGCATCA AAGGATATCT ATACACTGGT TTATGACATA AATACAGCAG ACGAGACATG 1260
GGAATGGGTT GACTTCAAGG AGATGGCACC TGAGGATATA AGATGGGATG GCGAGGAGCC 1320
TGATTTAAAC CTTATAGGTC GTGGTGCTCC CGTCCATGGT ATGAAGTCAA GCAGTCGTGG 1380
TGGCCCCATG TCAGGTACCG GAAGAGACAG AGGTCCCCAA AAGAACTCAT TCAAGAAAGA 1440
TTATCCATCA CAAAACGGTA TTGGGAAGAA GAGTGTTGAC TACATAGAAA TTCTCCATAC 1500
AGAGACACTC ATAAAGGAGG TGGAGCGGGT TTTCAGTTCA GCCAACCCTG ACCCCCTTGA 1560
GATGGAGAGG GCTAAGAAAG CGCTAAAGGA GCACGAACAA TCATTAATTG ATGCGATTGC 1620
AAGGCTTGCT GAGGCGTCTG ATGATGATCG TGTGCGATCT TTGGAGTATA ACCGTGGATG 1680
GAGGAACCAA CATGGAGGAA GATATGCGGA TGATATGACC ATGGACGGCC ACATGGCTGG 1740
AGATGCAGAT GCCATGTAAA CCTGCCAATG TGTACACAAA ATTCCTTCAT TAGCTTATTT 1800
TTTGCCTGTT GTAAAATCTT GACGCTAATT TTTCTCTCTC TAGATTTAGC CGTAGGTACT 1860
TCTGATTGGT CCTAACCAAA GAAACAGTTA GGATCACCAC TCTGATTGTT CAGCTTTTGT 1920
AGTAGAATTA CGCCCAGCTC ATCCTTTACA CTGTAAATTT AGATTTGGAG CTGATTTTGT 1980
CGGTCGCTAG ACATTTGATA AGCATCTGCC GTGGCCTGTT TGGTTTCCTA GTGCAAA 2038
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sob-0101 Sb07g016770.1 Sorghum bicolor 88 0.0 684
WERAM-Sei-0050 Si013860m Setaria italica 83 2e-157 552
WERAM-Hov-0091 MLOC_68440.1 Hordeum vulgare 66 1e-126 450
WERAM-Tra-0189 Traes_5BL_19FF81B34.2 Triticum aestivum 66 1e-126 450
WERAM-Tru-0020 TRIUR3_09050-P1 Triticum urartu 66 1e-126 450
WERAM-Aet-0094 EMT19648 Aegilops tauschii 66 5e-126 448
WERAM-Bro-0066 Bo4g021690.1 Brassica oleracea 48 3e-73 273
WERAM-Brr-0021 Bra004832.1-P Brassica rapa 43 3e-57 219
Created Date 25-Jun-2016