WERAM Information

Tag Content
WERAM ID WERAM-Zem-0086
Ensembl Protein ID GRMZM2G155123_P01
Gene Name LOC100272532 ZEAMMB73_564303
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GRMZM2G155123 GRMZM2G155123_T01 GRMZM2G155123_P01
GRMZM2G155123 GRMZM2G155123_T02 GRMZM2G155123_P02
GRMZM2G155123 GRMZM2G155123_T03 GRMZM2G155123_P03
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 2.10e-07 32.6 116 169
Organism Zea mays
Domain Profile
  Me_Reader PHD
            PHD.txt   3 iClvCgkddegekemvqCde..CddwfHlkCvklplsslp.eg......kswyCpsCk 51 
                         Cl C+ +  +++ m++C+   C+ w H++Cv +p    p eg       ++yC+ C+
  GRMZM2G155123_P01 116 RCL-CNSTLLNDN-MIKCEDgkCQVWQHITCVLIP--DKPtEGagpdipPHFYCELCR 169
                        699.*88878876.*****999*************..44435567999889******8 PP
Protein Sequence
(Fasta)		MSDLASSCKD KLAYFRIKEL KDILNQLGLP KQGKKQDLVD RVLAILSDEQ GQHHHGWGRK 60
NALTREAVAK VVDDTYRKMQ VCAPDLPSRS HSGSDFSHFR PKEEAPDFYH VDTKVRCLCN 120
STLLNDNMIK CEDGKCQVWQ HITCVLIPDK PTEGAGPDIP PHFYCELCRL KRADPFWVTT 180
GNPLLPVKFM SSGVGNDGAS VPQIVEKTFQ LSRADRETVQ RQEYDLQVWC ILINDKVQFR 240
MQWPQYAELQ VNGIPVRVMT RPGSQLLGIN GRDDGPLVTT CSREGINKIS LSRVDARTFC 300
FGVRIVRRRT VPQVLSI 317
Nucleotide Sequence
(Fasta)		TCACCCTTTC TCGACGAACC CGTCCCACAA GCACGCGCGA CGCGAGCCAA GGAAGACGAG 60
AGCGAGGTGG AGAGAGAGAG AGAGAGGAAA ACCCTGCCCC GTCCAGGCAG CCGTCGTCGA 120
CGCAAACGGC GGAGGCCACA GAGACGCCAC GCGAGGGAGC CCCGCCGCAG CAGCACCCGC 180
GCCGTCCCAA TTCGGCGCCC CGATCGCCGG ATCTCCTCGC CGGCGCCGGG GCCCTCGATC 240
GCCCTCTCCC CATGCCCGTG CCCCTCCGGG GGTTTCATTG CGCGGGCGCC GGCCATGTCG 300
GACCTCGCTT CCAGCTGCAA GGATAAACTT GCGTATTTTA GAATAAAGGA GCTCAAAGAT 360
ATCTTAAATC AGCTGGGGTT ACCGAAGCAA GGAAAGAAGC AGGACCTTGT TGACAGGGTA 420
TTGGCTATTT TATCAGATGA GCAAGGTCAA CATCATCATG GATGGGGAAG GAAAAATGCT 480
CTTACAAGGG AGGCGGTGGC AAAAGTTGTT GATGACACAT ACAGGAAAAT GCAAGTATGT 540
GCTCCTGACC TTCCCTCTAG AAGCCACAGT GGATCAGATT TCAGTCATTT CAGGCCCAAA 600
GAGGAAGCGC CTGACTTCTA CCATGTGGAT ACTAAGGTCC GCTGCCTTTG CAATAGCACA 660
TTGCTAAATG ACAATATGAT TAAGTGCGAA GATGGCAAAT GCCAGGTGTG GCAGCATATT 720
ACCTGCGTAC TCATTCCAGA TAAGCCCACG GAGGGTGCTG GCCCTGATAT TCCACCTCAT 780
TTTTATTGTG AACTGTGCCG ACTGAAACGG GCAGACCCGT TTTGGGTGAC TACCGGAAAT 840
CCATTACTAC CTGTGAAATT TATGTCATCT GGTGTTGGAA ATGATGGAGC AAGTGTACCT 900
CAAATTGTGG AGAAGACTTT CCAACTTTCC CGAGCAGATA GAGAAACAGT TCAGAGACAA 960
GAATATGATC TCCAGGTTTG GTGCATCCTT ATAAATGACA AAGTCCAGTT CAGGATGCAA 1020
TGGCCTCAAT ATGCAGAATT GCAAGTGAAC GGTATTCCTG TACGAGTAAT GACCAGGCCC 1080
GGTTCTCAGT TACTAGGGAT AAATGGGCGG GATGATGGGC CACTGGTAAC CACATGCAGT 1140
AGAGAAGGGA TCAACAAAAT TAGCTTATCT AGAGTGGATG CTCGAACCTT TTGCTTTGGA 1200
GTTCGAATTG TTAGGAGGAG GACTGTTCCT CAGGTTTTGT CCATTTAGCT TTCTACTTAT 1260
CATATAGTTG AAATGACTAG GTTCACATGA TTTTCTGTTT TGTAAATGGT CCCTATGTAT 1320
TGTGAACTTT TATCTTGTTT CATGTTAAAT ATCATCTAGA CAGCAATATT TTGTGTTGAC 1380
AA 1383
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orp-0048 OPUNC05G02000.1 Oryza punctata 82 7e-158 553
WERAM-Orl-0083 KN539825.1_FGP005 Oryza longistaminata 82 2e-157 552
WERAM-Orni-0108 ONIVA10G12200.1 Oryza nivara 81 1e-156 549
WERAM-Orr-0050 ORUFI05G01890.1 Oryza rufipogon 81 1e-156 549
WERAM-Org-0050 ORGLA05G0017700.1 Oryza glaberrima 82 5e-156 547
WERAM-Orb-0050 OBART05G01770.1 Oryza barthii 82 6e-153 537
WERAM-Orgl-0049 OGLUM05G01840.1 Oryza glumaepatula 81 2e-132 469
WERAM-Mua-0008 GSMUA_Achr10P13170_001 Musa acuminata 67 3e-122 435
WERAM-Sol-0139 Solyc11g069160.1.1 Solanum lycopersicum 62 8e-117 417
WERAM-Viv-0034 VIT_06s0004g03180.t01 Vitis vinifera 65 1e-116 416
WERAM-Arl-0112 fgenesh2_kg.8__ 2005__ AT5G60410.5 Arabidopsis lyrata 60 5e-115 411
WERAM-Art-0145 AT5G60410.1 Arabidopsis thaliana 59 9e-114 407
WERAM-Met-0101 AES88651 Medicago truncatula 59 1e-111 400
WERAM-Brr-0105 Bra020249.1-P Brassica rapa 56 2e-107 386
WERAM-Glm-0129 GLYMA11G15880.1 Glycine max 59 1e-105 380
WERAM-Tra-0135 Traes_4AL_96A137452.1 Triticum aestivum 50 2e-91 332
WERAM-Hov-0075 MLOC_60545.2 Hordeum vulgare 50 5e-91 331
WERAM-Tru-0081 TRIUR3_29937-P1 Triticum urartu 49 3e-90 328
WERAM-Php-0135 PP1S94_39V6.1 Physcomitrella patens 47 6e-90 327
WERAM-Aet-0041 EMT28925 Aegilops tauschii 48 4e-85 311
WERAM-Sem-0107 EFJ20543 Selaginella moellendorffii 52 8e-85 311
WERAM-Sot-0100 PGSC0003DMT400088246 Solanum tuberosum 58 8e-56 214
WERAM-Brd-0102 BRADI4G26730.1 Brachypodium distachyon 43 7e-23 105
Created Date 25-Jun-2016