Tag |
Content |
WERAM ID |
WERAM-Tut-0103 |
Ensembl Protein ID |
ENSTTRP00000008572.1 |
Gene Name |
EYS |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
HD2 |
0.4 |
33 |
|
|
|
Organism |
Tursiops truncatus |
Domain Profile |
HDAC HD2
Query: 78 LAYSRVPDISYDYEFHLKFQLANNHSAVQDNLLFFTGQKGHGLSGDDFLA 127 L+ + P IS+D F +F+L+ HS + N+ F G K + DDF + Sbjct: 57 LSQDKFPQISFDLVFDKEFELS--HSGTKANVHFI-GYKSPNIEQDDFTS 103 Database: Arabidopsis_thaliana.TAIR10.31.pep.all.fa Posted date: Jun 9, 2016 10:44 AM Number of letters in database: 14,482,851 Number of sequences in database: 35,386 Lambda K H 0.321 0.137 0.457 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 35386 Number of Hits to DB: 10,075,869 Number of extensions: 433717 Number of successful extensions: 837 Number of sequences better than 10.0: 14 Number of HSP's gapped: 837 Number of HSP's successfully gapped: 19 Length of query: 343 Length of database: 14,482,851 Length adjustment: 101 Effective length of query: 242 Effective length of database: 10,908,865 Effective search space: 2639945330 Effective search space used: 2639945330 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 61 (28.1 bits)
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Protein Sequence (Fasta) | DSETWFCDCP RLHSGKQCQF ATCESNPCRN GATCVPKSGT DIVCLCPYGR SGLLCTEAVH 60 ITQPRLSGMD AFGYTSFLAY SRVPDISYDY EFHLKFQLAN NHSAVQDNLL FFTGQKGHGL 120 SGDDFLAVGL RSGRVVYSYN LGSGTASVSS DPLDLSHGIH TVLLGRSFRA GWLKVDDQQN 180 KSXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXCIFTLQV RTKKNGHFRS 240 LGTPEGHPNA GRSVGQCDAS PCRLMKCGNG GTCVEQGSTV YCNCPSGWKG AFCTETVSTC 300 DPEHDPPHHC SKGATCVSPH GYCHCPLGNT GVYCEQEAQL MLS 343Protein Fasta Sequence
>ENSTTRP00000008572.1|HD2|Tursiops truncatus DSETWFCDCPRLHSGKQCQFATCESNPCRNGATCVPKSGTDIVCLCPYGRSGLLCTEAVHITQPRLSGMDAFGYTSFLAYSRVPDISYDYEFHLKFQLANNHSAVQDNLLFFTGQKGHGLSGDDFLAVGLRSGRVVYSYNLGSGTASVSSDPLDLSHGIHTVLLGRSFRAGWLKVDDQQNKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCIFTLQVRTKKNGHFRSLGTPEGHPNAGRSVGQCDASPCRLMKCGNGGTCVEQGSTVYCNCPSGWKGAFCTETVSTCDPEHDPPHHCSKGATCVSPHGYCHCPLGNTGVYCEQEAQLMLS
|
Nucleotide Sequence (Fasta) | GATAGTGAAA CTTGGTTTTG TGACTGTCCA AGGCTGCACT CGGGCAAGCA GTGCCAGTTT 60 GCAACTTGTG AAAGCAACCC ATGTAGAAAT GGTGCCACCT GTGTTCCTAA ATCCGGGACA 120 GACATTGTCT GCCTCTGTCC GTATGGACGC TCTGGTCTCC TCTGCACTGA AGCTGTTCAC 180 ATCACCCAGC CCAGGCTCAG TGGGATGGAT GCCTTTGGAT ATACCTCGTT CCTGGCTTAT 240 TCACGGGTCC CAGACATCAG CTATGATTAT GAGTTCCACT TGAAGTTTCA GCTGGCAAAC 300 AACCACTCAG CAGTGCAAGA CAACTTGTTA TTTTTCACCG GACAGAAGGG CCATGGGCTG 360 AGTGGTGATG ACTTCCTGGC TGTGGGTCTG CGCAGCGGCC GCGTGGTTTA CAGTTACAAC 420 CTGGGGTCTG GCACAGCAAG TGTCAGCAGC GATCCCCTCG ATCTGAGCCA TGGGATCCAC 480 ACGGTCCTTC TGGGGAGGTC CTTCCGAGCA GGCTGGCTGA AGGTAGATGA TCAGCAAAAT 540 AAATCCATNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 600 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 660 NNNNNNNGTT GTATTTTTAC TCTGCAAGTT CGCACTAAGA AGAATGGCCA TTTCAGAAGC 720 CTGGGGACGC CTGAGGGCCA CCCAAATGCT GGGCGCAGCG TTGGCCAGTG TGATGCTTCT 780 CCCTGTCGCT TGATGAAATG TGGCAACGGT GGGACGTGTG TGGAGCAGGG ATCGACTGTT 840 TACTGTAACT GTCCTAGTGG ATGGAAAGGA GCCTTTTGCA CGGAGACAGT TTCCACCTGC 900 GACCCTGAGC ATGACCCTCC ACACCACTGC AGCAAAGGAG CAACTTGTGT CTCGCCTCAT 960 GGATACTGTC ACTGTCCACT AGGAAACACT GGAGTCTACT GTGAGCAAGA GGCTCAACTC 1020 ATGCTGTCC
Nucleotide Fasta Sequence
>ENSTTRP00000008572.1|HD2|Tursiops truncatus GATAGTGAAACTTGGTTTTGTGACTGTCCAAGGCTGCACTCGGGCAAGCAGTGCCAGTTTGCAACTTGTGAAAGCAACCCATGTAGAAATGGTGCCACCTGTGTTCCTAAATCCGGGACAGACATTGTCTGCCTCTGTCCGTATGGACGCTCTGGTCTCCTCTGCACTGAAGCTGTTCACATCACCCAGCCCAGGCTCAGTGGGATGGATGCCTTTGGATATACCTCGTTCCTGGCTTATTCACGGGTCCCAGACATCAGCTATGATTATGAGTTCCACTTGAAGTTTCAGCTGGCAAACAACCACTCAGCAGTGCAAGACAACTTGTTATTTTTCACCGGACAGAAGGGCCATGGGCTGAGTGGTGATGACTTCCTGGCTGTGGGTCTGCGCAGCGGCCGCGTGGTTTACAGTTACAACCTGGGGTCTGGCACAGCAAGTGTCAGCAGCGATCCCCTCGATCTGAGCCATGGGATCCACACGGTCCTTCTGGGGAGGTCCTTCCGAGCAGGCTGGCTGAAGGTAGATGATCAGCAAAATAAATCCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTGTATTTTTACTCTGCAAGTTCGCACTAAGAAGAATGGCCATTTCAGAAGCCTGGGGACGCCTGAGGGCCACCCAAATGCTGGGCGCAGCGTTGGCCAGTGTGATGCTTCTCCCTGTCGCTTGATGAAATGTGGCAACGGTGGGACGTGTGTGGAGCAGGGATCGACTGTTTACTGTAACTGTCCTAGTGGATGGAAAGGAGCCTTTTGCACGGAGACAGTTTCCACCTGCGACCCTGAGCATGACCCTCCACACCACTGCAGCAAAGGAGCAACTTGTGTCTCGCCTCATGGATACTGTCACTGTCCACTAGGAAACACTGGAGTCTACTGTGAGCAAGAGGCTCAACTCATGCTGTCC
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Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |