Tag |
Content |
WERAM ID |
WERAM-Sus-0152 |
Ensembl Protein ID |
ENSSSCP00000027742.1 |
Gene Name |
NCAPD3 |
Ensembl Information |
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Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
Me_Reader |
Me_Reader_other |
0 |
1101 |
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Organism |
Sus scrofa |
Domain Profile |
Me_Reader Me_Reader_other
Query: 1 GSVANQVFHPVMFDKCVQILKKSWPQESSLSQKRKKEQPKNSQANPRGNKKRGRPLRKXX 60 GSVANQVFHPVMFDKC+Q LKKSWPQES+L++KRKKEQPK+SQANP ++KRG+P R+ Sbjct: 128 GSVANQVFHPVMFDKCIQTLKKSWPQESNLNRKRKKEQPKSSQANPGRHRKRGKPPRRED 187 Query: 61 XXXXXXXXXXXXXXXXFFSAWDLCQIRNAIFDLLKNFLRLLPRFSLKEKPQCVQNCIEVF 120 F SA DL QIRNAIF LLKNFLRLLP+FSLKEKPQCVQNCIEVF Sbjct: 188 IEMDEIIEEQEDENICF-SARDLSQIRNAIFHLLKNFLRLLPKFSLKEKPQCVQNCIEVF 246 Query: 121 VALTNLEPVPREFHVTQARNPNQAKYIPELAYHGLYLMCSPFHGEGDKVIRCVFHQMLYL 180 V+LTN EPV E HVTQAR NQAKYIPELAY+GLYL+CSP HGEGDKVI CVFHQML + Sbjct: 247 VSLTNFEPVLHECHVTQARALNQAKYIPELAYYGLYLLCSPIHGEGDKVISCVFHQMLSV 306 Query: 181 ILMLEVGEGSHHAPLTITPTVINGRNLAVQFISSLVDELKEGIFPVLRILLQHICVKVVD 240 ILMLEVGEGSH APL +T VIN RN AVQFIS+LVDELKE IFPV+RILLQHIC KVVD Sbjct: 307 ILMLEVGEGSHRAPLAVTSQVINCRNQAVQFISALVDELKESIFPVVRILLQHICAKVVD 366 Query: 241 KSEYRTYAAQSLVQLLNKLPCAEYASFIAWFYGCSRNPKTSRRVFTLDVALALLELPERE 300 KSEYRT+AAQSLVQLL+KLPC EYA FIAW Y SR+ K RVFTLDV LALLELPERE Sbjct: 367 KSEYRTFAAQSLVQLLSKLPCGEYAMFIAWLYKYSRSSKIPHRVFTLDVVLALLELPERE 426 Query: 301 VEGTLPPEHQKFLKHKFLVQEILFARCVDKAPAVRSKALSSFAHCLEFSSTATSESVLGL 360 V+ TL EHQKFLKHKFLVQEI+F RC+DKAP VRSKALSSFAHCLE + T+ SES+L L Sbjct: 427 VDNTLSLEHQKFLKHKFLVQEIMFDRCLDKAPTVRSKALSSFAHCLELTVTSASESILEL 486 Query: 361 LIDSPTISGIESN-----RDTXXXXXXXXXXXXXXXXKQNRRLNNSFKISSTEMCLMTML 415 LI+SPT S IES+ R++ + ++ + S E C+M ML Sbjct: 487 LINSPTFSVIESHPGTLLRNSSAFSYQRQTSNRSEPSGEINIDSSGETVGSGERCVMAML 546 Query: 416 KSRMGDEKANVRKSALQVLVSVLKHCDVSGLKEELSILQDHCRDIALSVRKQALQSLTEL 475 + R+ DEK NVRKSALQVLVS+LKHCDVSG+KE+L ILQD CRD A+SVRKQALQSLTEL Sbjct: 547 RRRIRDEKTNVRKSALQVLVSILKHCDVSGMKEDLWILQDQCRDPAVSVRKQALQSLTEL 606 Query: 476 LVAQPRCVQIQKAWLWGVIPAVMDSERTVQDKALECLDQLLLQNIQHHSQFHHEDDSQVL 535 L+AQPRCVQIQKAWL GV+P VMD E TVQ+KALE LDQLLLQNI+HHS FH DDSQVL Sbjct: 607 LMAQPRCVQIQKAWLRGVVPVVMDCESTVQEKALEFLDQLLLQNIRHHSHFHSGDDSQVL 666 Query: 536 TWAXXXXXXXXXXXXITFVGQSLHIWGEKSFFLMDFLNKVIEHSHQRLVGNV-VLCKEGP 594 WA ++ ++ HIW +K F F+N VI H+ +L + Sbjct: 667 AWALLTLLTTESQELSRYLNKAFHIWSKKEKFSPTFINNVISHTGTEHSAPAWMLLSKIA 726 Query: 595 NALEKLEQLTQIYGQWELKRKGVKVSPSMDFRSSPDMVAGHAHKRVLVFGQCKVTTIXXX 654 + +L+ ++I WE + + +P+ + V GH K + + KVT Sbjct: 727 GSSPRLD-YSRIIQSWE--KISSQQNPNSNTLGHILCVIGHIAKHLPKSTRDKVTDAVKC 783 Query: 655 XXXXXXXXXXXMNGSLDDLSFERLCRTXXPEIGRHEKLLAQVCGDILSTCVHCLSDVLLK 714 ++ ++D L +RLCR ++LL QVCGD+LSTC H LS+++LK Sbjct: 784 KLNGFQWSLEVISSAVDAL--QRLCRASAETPAEEQELLTQVCGDVLSTCEHRLSNIVLK 841 Query: 715 EDGTRRMNEDLVVKYIFTLGDVAQLCPARVDKRAFLLIQSILAASPSTDHLPASDPGGSE 774 E+GT M+EDL+VKYIFTLGD+AQLCPARV+KR FLLIQS+LA+S DH P+S G SE Sbjct: 842 ENGTGNMDEDLLVKYIFTLGDIAQLCPARVEKRIFLLIQSVLASSADADHSPSSQ-GSSE 900 Query: 775 ATASQPLPGIHSSIMPSVIRAHAVIALGKLCLQHEDLAKRSIPALVRELEVCSDMAVRNN 834 A ASQP P + S+MPSVIRAHA+I LGKLCLQHEDLAK+SIPALVRELEVC D+AVRNN Sbjct: 901 APASQPPPQVRGSVMPSVIRAHAIITLGKLCLQHEDLAKKSIPALVRELEVCEDVAVRNN 960 Query: 835 VVITMCDLCKRYTAMVDKYIPNISACLKDSEPFIRRQXXXXXXXXXQEDFVKWKGPLFFR 894 V+I MCDLC RYT MVDKYIPNIS CLKDS+PFIR+Q QE+FVKWKG LFFR Sbjct: 961 VIIVMCDLCIRYTIMVDKYIPNISMCLKDSDPFIRKQTLILLTNLLQEEFVKWKGSLFFR 1020 Query: 895 FVSTLVD--PDLA 905 FVSTL+D PD+A Sbjct: 1021 FVSTLIDSHPDIA 1033
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Protein Sequence (Fasta) | GSVANQVFHP VMFDKCVQIL KKSWPQESSL SQKRKKEQPK NSQANPRGNK KRGRPLRKES 60 LEMDEIIEEQ EDEESIFFSA WDLCQIRNAI FDLLKNFLRL LPRFSLKEKP QCVQNCIEVF 120 VALTNLEPVP REFHVTQARN PNQAKYIPEL AYHGLYLMCS PFHGEGDKVI RCVFHQMLYL 180 ILMLEVGEGS HHAPLTITPT VINGRNLAVQ FISSLVDELK EGIFPVLRIL LQHICVKVVD 240 KSEYRTYAAQ SLVQLLNKLP CAEYASFIAW FYGCSRNPKT SRRVFTLDVA LALLELPERE 300 VEGTLPPEHQ KFLKHKFLVQ EILFARCVDK APAVRSKALS SFAHCLEFSS TATSESVLGL 360 LIDSPTISGI ESNRDTSLKN SSELLSSPPP YSKQNRRLNN SFKISSTEMC LMTMLKSRMG 420 DEKANVRKSA LQVLVSVLKH CDVSGLKEEL SILQDHCRDI ALSVRKQALQ SLTELLVAQP 480 RCVQIQKAWL WGVIPAVMDS ERTVQDKALE CLDQLLLQNI QHHSQFHHED DSQVLTWALL 540 SLLSTESQEL ITFVGQSLHI WGEKSFFLMD FLNKVIEHSH QRLVGNVVLC KEGPNALEKL 600 EQLTQIYGQW ELKRKGVKVS PSMDFRSSPD MVAGHAHKRV LVFGQCKVTT ILSSKVLHVL 660 LSVKLMNGSL DDLSFERLCR TXXPEIGRHE KLLAQVCGDI LSTCVHCLSD VLLKEDGTRR 720 MNEDLVVKYI FTLGDVAQLC PARVDKRAFL LIQSILAASP STDHLPASDP GGSEATASQP 780 LPGIHSSIMP SVIRAHAVIA LGKLCLQHED LAKRSIPALV RELEVCSDMA VRNNVVITMC 840 DLCKRYTAMV DKYIPNISAC LKDSEPFIRR QTLLLLTDLL QEDFVKWKGP LFFRFVSTLV 900 DPDLA 905Protein Fasta Sequence
>ENSSSCP00000027742.1|Me_Reader_other|Sus scrofa GSVANQVFHPVMFDKCVQILKKSWPQESSLSQKRKKEQPKNSQANPRGNKKRGRPLRKESLEMDEIIEEQEDEESIFFSAWDLCQIRNAIFDLLKNFLRLLPRFSLKEKPQCVQNCIEVFVALTNLEPVPREFHVTQARNPNQAKYIPELAYHGLYLMCSPFHGEGDKVIRCVFHQMLYLILMLEVGEGSHHAPLTITPTVINGRNLAVQFISSLVDELKEGIFPVLRILLQHICVKVVDKSEYRTYAAQSLVQLLNKLPCAEYASFIAWFYGCSRNPKTSRRVFTLDVALALLELPEREVEGTLPPEHQKFLKHKFLVQEILFARCVDKAPAVRSKALSSFAHCLEFSSTATSESVLGLLIDSPTISGIESNRDTSLKNSSELLSSPPPYSKQNRRLNNSFKISSTEMCLMTMLKSRMGDEKANVRKSALQVLVSVLKHCDVSGLKEELSILQDHCRDIALSVRKQALQSLTELLVAQPRCVQIQKAWLWGVIPAVMDSERTVQDKALECLDQLLLQNIQHHSQFHHEDDSQVLTWALLSLLSTESQELITFVGQSLHIWGEKSFFLMDFLNKVIEHSHQRLVGNVVLCKEGPNALEKLEQLTQIYGQWELKRKGVKVSPSMDFRSSPDMVAGHAHKRVLVFGQCKVTTILSSKVLHVLLSVKLMNGSLDDLSFERLCRTXXPEIGRHEKLLAQVCGDILSTCVHCLSDVLLKEDGTRRMNEDLVVKYIFTLGDVAQLCPARVDKRAFLLIQSILAASPSTDHLPASDPGGSEATASQPLPGIHSSIMPSVIRAHAVIALGKLCLQHEDLAKRSIPALVRELEVCSDMAVRNNVVITMCDLCKRYTAMVDKYIPNISACLKDSEPFIRRQTLLLLTDLLQEDFVKWKGPLFFRFVSTLVDPDLA
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Nucleotide Sequence (Fasta) | ATTCGTTACA AATAAATAGG CAGTGTGGCC AATCAAGTAT TCCACCCAGT GATGTTTGAC 60 AAATGTGTTC AGATTCTAAA GAAGAGCTGG CCTCAGGAAT CCAGCTTGAG CCAGAAAAGA 120 AAGAAAGAAC AACCGAAGAA CTCTCAGGCC AATCCAAGGG GGAATAAGAA GAGAGGAAGG 180 CCGCTCAGGA AGGAGTCTTT GGAGATGGAT GAAATTATTG AAGAACAAGA GGATGAAGAG 240 AGTATTTTTT TTTCTGCTTG GGACCTTTGT CAAATTCGAA ATGCCATCTT TGACCTTTTG 300 AAGAACTTTT TAAGGCTTCT ACCCAGGTTC TCCCTGAAAG AAAAGCCACA ATGTGTACAG 360 AATTGTATAG AGGTGTTTGT TGCATTAACT AATCTTGAAC CAGTTCCTCG CGAATTTCAC 420 GTTACACAAG CCAGAAACCC TAACCAAGCG AAGTACATAC CAGAGCTGGC CTATCATGGA 480 TTGTACTTGA TGTGCTCCCC ATTTCATGGA GAAGGAGATA AGGTCATCAG ATGTGTCTTC 540 CATCAAATGC TCTATTTGAT ATTAATGTTG GAAGTGGGTG AAGGCTCCCA TCACGCACCC 600 CTCACCATCA CTCCTACAGT CATCAATGGT AGAAACCTGG CAGTCCAGTT TATCAGTTCA 660 CTTGTGGATG AACTAAAAGA AGGTATATTC CCAGTCCTTC GTATCTTACT CCAGCACATC 720 TGTGTCAAGG TAGTTGATAA ATCAGAGTAT CGGACCTATG CAGCTCAGTC CCTGGTCCAG 780 CTGCTCAACA AGCTTCCTTG TGCGGAATAT GCTTCTTTCA TTGCCTGGTT TTACGGATGT 840 TCACGTAATC CCAAGACCTC ACGCCGAGTA TTCACCCTTG ATGTTGCTTT GGCCCTTCTG 900 GAGCTGCCTG AACGAGAGGT GGAAGGCACT CTGCCCCCAG AGCATCAGAA GTTCCTGAAG 960 CATAAGTTCT TGGTGCAAGA GATCCTGTTC GCCCGGTGTG TGGACAAGGC ACCGGCTGTC 1020 CGCAGCAAGG CTCTGTCCAG TTTTGCACAT TGCCTGGAGT TCTCTTCCAC AGCTACATCA 1080 GAGAGCGTCC TGGGGCTTCT GATTGATAGT CCTACTATTT CAGGAATAGA GAGCAACCGT 1140 GACACCTCAC TGAAAAATTC ATCAGAATTG CTTTCTTCTC CCCCCCCTTA TAGTAAGCAA 1200 AATAGAAGAT TAAATAATTC GTTCAAAATT TCTTCAACAG AGATGTGTCT CATGACAATG 1260 CTGAAGAGCA GGATGGGGGA TGAGAAGGCC AATGTCAGGA AGTCTGCACT CCAGGTCTTA 1320 GTGAGCGTTC TGAAACACTG TGATGTCTCT GGTTTGAAAG AAGAGCTGTC CATCCTGCAG 1380 GACCACTGTC GGGACATCGC CTTATCTGTC CGGAAACAGG CCTTGCAGTC TCTCACTGAG 1440 CTTCTTGTGG CCCAGCCTAG GTGTGTCCAG ATACAGAAGG CCTGGCTGTG GGGGGTCATC 1500 CCGGCTGTGA TGGACTCTGA GCGTACTGTG CAGGACAAGG CCCTGGAGTG TCTGGACCAG 1560 CTTCTGCTGC AGAACATCCA GCATCACAGT CAGTTCCATC ATGAGGACGA CAGCCAGGTG 1620 CTCACCTGGG CGCTACTGTC ACTGCTGAGC ACAGAGAGCC AGGAGTTGAT AACATTTGTT 1680 GGGCAGTCAC TGCACATTTG GGGGGAAAAA AGTTTTTTTC TTATGGACTT TCTGAACAAA 1740 GTGATAGAAC ACAGCCATCA GCGCCTTGTG GGAAATGTTG TTCTCTGCAA AGAAGGTCCA 1800 AATGCTCTGG AGAAATTAGA GCAACTTACT CAAATCTATG GGCAATGGGA GCTGAAAAGG 1860 AAAGGCGTGA AAGTTTCTCC CTCAATGGAT TTCAGAAGCA GCCCAGACAT GGTTGCTGGA 1920 CATGCGCATA AACGAGTTTT GGTTTTTGGC CAGTGTAAAG TTACCACCAT ATTATCTTCC 1980 AAGGTACTTC ATGTGCTACT CAGTGTTAAG CTTATGAATG GTTCACTGGA TGATTTAAGC 2040 TTTGAACGGC TATGTAGGAC CGNAGNTCCA GAGATAGGAC GCCATGAGAA ATTACTGGCA 2100 CAGGTGTGTG GGGACATCCT TTCCACCTGC GTGCACTGCC TCTCCGACGT ACTTCTGAAG 2160 GAGGATGGGA CCAGGAGGAT GAATGAAGAC CTGGTGGTGA AGTACATTTT CACCTTAGGA 2220 GACGTAGCCC AGCTCTGTCC AGCTAGAGTG GACAAGAGAG CCTTCCTGCT GATCCAGTCC 2280 ATCCTGGCTG CTTCTCCCAG CACGGACCAC TTGCCAGCCT CAGATCCAGG CGGCAGTGAG 2340 GCCACAGCCT CCCAACCCCT CCCAGGGATC CACAGCTCCA TCATGCCCTC CGTGATCAGA 2400 GCACATGCCG TCATTGCCTT GGGAAAGCTG TGCTTACAGC ATGAGGATCT CGCCAAGAGG 2460 AGCATCCCAG CCCTGGTGCG TGAGCTGGAG GTGTGCAGCG ACATGGCCGT CCGCAACAAC 2520 GTCGTCATCA CCATGTGTGA TCTCTGCAAG CGGTACACGG CCATGGTGGA CAAGTACATC 2580 CCCAACATCT CTGCGTGTCT GAAGGACTCA GAGCCGTTCA TCCGCAGGCA GACGCTGCTC 2640 TTGCTCACTG ACCTGCTGCA GGAGGACTTC GTGAAGTGGA AGGGCCCCCT GTTCTTCCGG 2700 TTTGTCAGCA CACTGGTAGA CCCAGACTTG GCT
2734Nucleotide Fasta Sequence
>ENSSSCP00000027742.1|Me_Reader_other|Sus scrofa ATTCGTTACAAATAAATAGGCAGTGTGGCCAATCAAGTATTCCACCCAGTGATGTTTGACAAATGTGTTCAGATTCTAAAGAAGAGCTGGCCTCAGGAATCCAGCTTGAGCCAGAAAAGAAAGAAAGAACAACCGAAGAACTCTCAGGCCAATCCAAGGGGGAATAAGAAGAGAGGAAGGCCGCTCAGGAAGGAGTCTTTGGAGATGGATGAAATTATTGAAGAACAAGAGGATGAAGAGAGTATTTTTTTTTCTGCTTGGGACCTTTGTCAAATTCGAAATGCCATCTTTGACCTTTTGAAGAACTTTTTAAGGCTTCTACCCAGGTTCTCCCTGAAAGAAAAGCCACAATGTGTACAGAATTGTATAGAGGTGTTTGTTGCATTAACTAATCTTGAACCAGTTCCTCGCGAATTTCACGTTACACAAGCCAGAAACCCTAACCAAGCGAAGTACATACCAGAGCTGGCCTATCATGGATTGTACTTGATGTGCTCCCCATTTCATGGAGAAGGAGATAAGGTCATCAGATGTGTCTTCCATCAAATGCTCTATTTGATATTAATGTTGGAAGTGGGTGAAGGCTCCCATCACGCACCCCTCACCATCACTCCTACAGTCATCAATGGTAGAAACCTGGCAGTCCAGTTTATCAGTTCACTTGTGGATGAACTAAAAGAAGGTATATTCCCAGTCCTTCGTATCTTACTCCAGCACATCTGTGTCAAGGTAGTTGATAAATCAGAGTATCGGACCTATGCAGCTCAGTCCCTGGTCCAGCTGCTCAACAAGCTTCCTTGTGCGGAATATGCTTCTTTCATTGCCTGGTTTTACGGATGTTCACGTAATCCCAAGACCTCACGCCGAGTATTCACCCTTGATGTTGCTTTGGCCCTTCTGGAGCTGCCTGAACGAGAGGTGGAAGGCACTCTGCCCCCAGAGCATCAGAAGTTCCTGAAGCATAAGTTCTTGGTGCAAGAGATCCTGTTCGCCCGGTGTGTGGACAAGGCACCGGCTGTCCGCAGCAAGGCTCTGTCCAGTTTTGCACATTGCCTGGAGTTCTCTTCCACAGCTACATCAGAGAGCGTCCTGGGGCTTCTGATTGATAGTCCTACTATTTCAGGAATAGAGAGCAACCGTGACACCTCACTGAAAAATTCATCAGAATTGCTTTCTTCTCCCCCCCCTTATAGTAAGCAAAATAGAAGATTAAATAATTCGTTCAAAATTTCTTCAACAGAGATGTGTCTCATGACAATGCTGAAGAGCAGGATGGGGGATGAGAAGGCCAATGTCAGGAAGTCTGCACTCCAGGTCTTAGTGAGCGTTCTGAAACACTGTGATGTCTCTGGTTTGAAAGAAGAGCTGTCCATCCTGCAGGACCACTGTCGGGACATCGCCTTATCTGTCCGGAAACAGGCCTTGCAGTCTCTCACTGAGCTTCTTGTGGCCCAGCCTAGGTGTGTCCAGATACAGAAGGCCTGGCTGTGGGGGGTCATCCCGGCTGTGATGGACTCTGAGCGTACTGTGCAGGACAAGGCCCTGGAGTGTCTGGACCAGCTTCTGCTGCAGAACATCCAGCATCACAGTCAGTTCCATCATGAGGACGACAGCCAGGTGCTCACCTGGGCGCTACTGTCACTGCTGAGCACAGAGAGCCAGGAGTTGATAACATTTGTTGGGCAGTCACTGCACATTTGGGGGGAAAAAAGTTTTTTTCTTATGGACTTTCTGAACAAAGTGATAGAACACAGCCATCAGCGCCTTGTGGGAAATGTTGTTCTCTGCAAAGAAGGTCCAAATGCTCTGGAGAAATTAGAGCAACTTACTCAAATCTATGGGCAATGGGAGCTGAAAAGGAAAGGCGTGAAAGTTTCTCCCTCAATGGATTTCAGAAGCAGCCCAGACATGGTTGCTGGACATGCGCATAAACGAGTTTTGGTTTTTGGCCAGTGTAAAGTTACCACCATATTATCTTCCAAGGTACTTCATGTGCTACTCAGTGTTAAGCTTATGAATGGTTCACTGGATGATTTAAGCTTTGAACGGCTATGTAGGACCGNAGNTCCAGAGATAGGACGCCATGAGAAATTACTGGCACAGGTGTGTGGGGACATCCTTTCCACCTGCGTGCACTGCCTCTCCGACGTACTTCTGAAGGAGGATGGGACCAGGAGGATGAATGAAGACCTGGTGGTGAAGTACATTTTCACCTTAGGAGACGTAGCCCAGCTCTGTCCAGCTAGAGTGGACAAGAGAGCCTTCCTGCTGATCCAGTCCATCCTGGCTGCTTCTCCCAGCACGGACCACTTGCCAGCCTCAGATCCAGGCGGCAGTGAGGCCACAGCCTCCCAACCCCTCCCAGGGATCCACAGCTCCATCATGCCCTCCGTGATCAGAGCACATGCCGTCATTGCCTTGGGAAAGCTGTGCTTACAGCATGAGGATCTCGCCAAGAGGAGCATCCCAGCCCTGGTGCGTGAGCTGGAGGTGTGCAGCGACATGGCCGTCCGCAACAACGTCGTCATCACCATGTGTGATCTCTGCAAGCGGTACACGGCCATGGTGGACAAGTACATCCCCAACATCTCTGCGTGTCTGAAGGACTCAGAGCCGTTCATCCGCAGGCAGACGCTGCTCTTGCTCACTGACCTGCTGCAGGAGGACTTCGTGAAGTGGAAGGGCCCCCTGTTCTTCCGGTTTGTCAGCACACTGGTAGACCCAGACTTGGCT
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Sequence Source |
Ensembl |
Orthology |
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Created Date |
25-Jun-2016 |