WERAM Information

Tag Content
WERAM ID WERAM-Sus-0052
Ensembl Protein ID ENSSSCP00000008209.2
Gene Name LRWD1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSSSCG00000007687.2 ENSSSCT00000008428.2 ENSSSCP00000008209.2
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader WD40 6.90e-121 403.9 289 648
Organism Sus scrofa
Domain Profile
  Me_Reader WD40
              WD40.txt   1 dhekelsavkfepaseega....slvaatvgseavtvydcqtqgeikllqkykghdeefysvawt.......adsnkrhslLasAgdrg 78 
                           d+e++l+a++fepa++eg+    s+++at+g+eav+v+dcqt+   ++l+kyk ++eef+svawt       a+++kr+s+La+Ag+rg
  ENSSSCP00000008209.2 289 DLETQLWACAFEPAWDEGHagatSQTVATCGGEAVCVIDCQTG---IVLHKYKSPGEEFFSVAWTaltvvtqAGHKKRWSVLAAAGLRG 374
                           789*************98544478*******************...******************************************* PP
              WD40.txt  79 lirlldveagqcikvlvgHknaiaelkFsPkdenlllsaSfdkrvrlWdiktdklkkifeahsdevldvdyd.lrgslivSc....... 159
                           l+rll+v+ag+c++v+++Hk+aia+l+FsP +e++l++aS+dkr+ lWdi++++ +++f+a+++++ld++++ lr+++++Sc       
  ENSSSCP00000008209.2 375 LVRLLHVRAGFCCGVIRAHKKAIATLCFSPTHETHLFTASYDKRIVLWDIGVPNHDYEFQASQLLTLDTTSIaLRLCPVASCpdaylla 463
                           ***************************************************************************************** PP
              WD40.txt 160 gmdgslkiWdvr....skrrvcevklvddenpeksnrrVdcvrfsngdlils.gsldntivlWdir.....kikqsevavvvLkrfeys 238
                           g++g++++Wdvr    +krrvce ++ + e++e+s+rrVd+++f+n+d+++s gs+++ti+lW+++     +++qs+vavvvL+r+++s
  ENSSSCP00000008209.2 464 GCEGGCCCWDVRldqpQKRRVCEAEFTFPEGSEASGRRVDGLAFVNEDVVASkGSGLGTICLWSWSqtwlgRGSQSTVAVVVLARLQWS 552
                           ******************************************************************9********************** PP
              WD40.txt 239 kteiyyislsfsvdnkkilvsgdedgkvyvwdls........veaalkakelllk......lgkvtakimqtsvspnesiiiltaltdd 313
                            te++y+sls ++d ++++++gde+g+v+++d+         ++ a +a++++lk      lg+ ++ +m++ v++n  +++ltaltd+
  ENSSSCP00000008209.2 553 PTELAYFSLSTCPD-EGLVLCGDEEGHVWIYDVRhilaqrppLPVAPQAPTQILKwpqpqaLGQTVTRTMVNMVVANRTFTYLTALTDS 640
                           **************.************************************************************************** PP
              WD40.txt 314 nivkiWdr 321
                           niv+iW r
  ENSSSCP00000008209.2 641 NIVAIWRR 648
                           ******98 PP
Protein Sequence
(Fasta)		MGPLSVRLLI QRGRPKSDRL GKIRSLDLSG LKLLSEHLDP KLLSRLKQLQ ELDLSNNQLE 60
TLPANLGLSH LRILRCANNQ LGDVTALCQF PQLEELSLEG NPFLTVSDNL KVSFLLPKLR 120
KVNGKDASST CSQVENLNRE LTSRVTAHWE KFMAALSPEE ETEKAQADFV RSAVRDVRYG 180
PESLSDFTQW RVRMISEELV ASGGTHVHEA DIPERPPKTR ATREPRARPV ALKRPSDIPL 240
SLSPSKRELT SPLAQAEGSP VGSDGSQLPP QLEPLHFLQC HSKNNSPRDL ETQLWACAFE 300
PAWDEGHAGA TSQTVATCGG EAVCVIDCQT GIVLHKYKSP GEEFFSVAWT ALTVVTQAGH 360
KKRWSVLAAA GLRGLVRLLH VRAGFCCGVI RAHKKAIATL CFSPTHETHL FTASYDKRIV 420
LWDIGVPNHD YEFQASQLLT LDTTSIALRL CPVASCPDAY LLAGCEGGCC CWDVRLDQPQ 480
KRRVCEAEFT FPEGSEASGR RVDGLAFVNE DVVASKGSGL GTICLWSWSQ TWLGRGSQST 540
VAVVVLARLQ WSPTELAYFS LSTCPDEGLV LCGDEEGHVW IYDVRHILAQ RPPLPVAPQA 600
PTQILKWPQP QALGQTVTRT MVNMVVANRT FTYLTALTDS NIVAIWRRA 649
Nucleotide Sequence
(Fasta)		TCCGGTCGTC GCCGGCGACG GATTCGCGCG GCGCCACCTC CTGGACTCGG CAAACCGCTG 60
GCGCCAGCAC CGGAGTCCCG TGCCGCCGTT CGGGCCACCG CGAGCCGCGC CTCCCCGCCA 120
TGGGCCCCCT TTCGGTGCGT CTGCTCATCC AGCGGGGGAG ACCCAAGAGC GACCGGCTGG 180
GGAAGATCCG GAGCCTAGAC CTGTCAGGGC TGAAACTGCT CTCAGAGCAT CTGGACCCCA 240
AGCTCCTGAG CCGCCTGAAG CAGCTGCAAG AGCTGGACCT CTCCAACAAC CAGCTGGAGA 300
CACTGCCCGC CAACCTGGGC CTGTCCCACC TGCGCATCCT CCGCTGCGCC AACAACCAGC 360
TGGGCGACGT CACTGCCCTG TGCCAGTTCC CACAGCTCGA GGAGCTCAGC CTGGAGGGCA 420
ATCCTTTCCT GACAGTCAGT GACAACCTGA AAGTCTCCTT CCTCCTGCCC AAGCTCCGCA 480
AGGTCAATGG CAAGGATGCT TCCTCCACTT GCTCTCAGGT GGAGAACCTG AACCGGGAGC 540
TGACCAGCAG GGTCACAGCT CACTGGGAGA AGTTTATGGC CGCGCTGAGC CCAGAGGAGG 600
AGACGGAGAA GGCTCAGGCG GACTTTGTGA GGTCTGCCGT CAGGGACGTC CGCTACGGGC 660
CCGAGTCCCT CAGTGACTTC ACGCAGTGGC GGGTGCGGAT GATCTCTGAG GAGCTGGTGG 720
CTTCTGGTGG GACCCACGTA CATGAGGCAG ACATCCCAGA GAGGCCCCCC AAAACCAGAG 780
CTACCCGGGA GCCCAGGGCC AGGCCAGTGG CCTTGAAACG GCCAAGTGAC ATCCCACTCA 840
GCCTCTCTCC CAGCAAGCGG GAGCTCACCT CTCCACTGGC CCAGGCAGAG GGCAGCCCGG 900
TGGGCTCTGA TGGCAGCCAG CTGCCCCCAC AGCTGGAGCC CCTGCACTTC CTGCAGTGCC 960
ACAGCAAGAA CAACAGCCCC CGGGACCTGG AGACCCAGCT CTGGGCTTGC GCCTTCGAGC 1020
CGGCCTGGGA CGAGGGGCAC GCAGGGGCCA CATCCCAGAC GGTGGCCACG TGTGGCGGGG 1080
AGGCTGTGTG TGTGATCGAC TGCCAGACGG GCATTGTGCT GCACAAGTAC AAGTCGCCCG 1140
GCGAGGAGTT CTTCTCGGTG GCCTGGACGG CCTTGACGGT GGTCACACAG GCAGGCCACA 1200
AGAAGCGCTG GAGCGTGCTG GCAGCTGCAG GCCTGCGGGG CCTGGTCCGG CTGCTGCACG 1260
TGCGTGCCGG CTTCTGCTGC GGGGTCATCC GCGCCCACAA GAAGGCCATT GCCACCCTCT 1320
GCTTCAGCCC CACCCACGAG ACCCACCTGT TCACGGCCTC CTATGACAAG CGGATCGTCC 1380
TCTGGGACAT CGGGGTGCCC AACCACGATT ATGAATTCCA GGCCAGCCAG CTGCTCACAC 1440
TCGACACCAC CTCCATCGCC CTGCGCCTCT GCCCCGTTGC CTCCTGCCCG GATGCCTACC 1500
TGCTGGCCGG CTGCGAGGGC GGCTGCTGCT GCTGGGACGT GCGGCTGGAC CAGCCCCAGA 1560
AGAGGAGGGT GTGTGAGGCG GAGTTCACCT TCCCCGAGGG CTCCGAGGCG TCTGGACGCA 1620
GAGTGGACGG GCTGGCCTTC GTGAACGAGG ACGTCGTGGC CTCCAAGGGG AGCGGCCTGG 1680
GCACCATCTG CCTGTGGAGC TGGAGCCAGA CATGGCTGGG CCGGGGCAGC CAGTCCACGG 1740
TGGCTGTGGT GGTCCTGGCT CGGCTGCAGT GGTCACCCAC CGAGTTGGCC TACTTCTCGC 1800
TCAGCACCTG TCCTGATGAG GGGCTCGTGC TCTGTGGGGA CGAGGAGGGC CATGTGTGGA 1860
TCTACGACGT CAGGCACATC CTGGCACAGC GGCCCCCGCT GCCCGTGGCC CCGCAGGCCC 1920
CCACGCAGAT CCTGAAGTGG CCGCAGCCGC AGGCCCTGGG CCAGACGGTG ACCAGGACCA 1980
TGGTGAACAT GGTGGTGGCC AACCGCACCT TCACCTACCT CACGGCGCTG ACCGACTCCA 2040
ACATCGTGGC CATCTGGAGG CGGGCG 2067
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Myl-0116 ENSMLUP00000009526.2 Myotis lucifugus 88 0.0 1142
WERAM-Tut-0164 ENSTTRP00000014076.1 Tursiops truncatus 91 0.0 1138
WERAM-Eqc-0135 ENSECAP00000015157.1 Equus caballus 88 0.0 1126
WERAM-Caf-0147 ENSCAFP00000020197.3 Canis familiaris 90 0.0 1123
WERAM-Loa-0076 ENSLAFP00000005701.3 Loxodonta africana 87 0.0 1121
WERAM-Poa-0159 ENSPPYP00000019572.2 Pongo abelii 87 0.0 1114
WERAM-Mup-0181 ENSMPUP00000015856.1 Mustela putorius furo 88 0.0 1112
WERAM-Dan-0064 ENSDNOP00000006444.3 Dasypus novemcinctus 89 0.0 1112
WERAM-Chs-0214 ENSCSAP00000014105.1 Chlorocebus sabaeus 87 0.0 1108
WERAM-Hos-0172 ENSP00000292616.5 Homo sapiens 87 0.0 1107
WERAM-Pat-0162 ENSPTRP00000033454.4 Pan troglodytes 87 0.0 1105
WERAM-Gog-0202 ENSGGOP00000025398.1 Gorilla gorilla 87 0.0 1105
WERAM-Mam-0100 ENSMMUP00000015768.2 Macaca mulatta 88 0.0 1095
WERAM-Ptv-0187 ENSPVAP00000016762.1 Pteropus vampyrus 85 0.0 1092
WERAM-Caj-0168 ENSCJAP00000029831.2 Callithrix jacchus 88 0.0 1088
WERAM-Ict-0065 ENSSTOP00000005680.2 Ictidomys tridecemlineatus 84 0.0 1077
WERAM-Paa-0219 ENSPANP00000008728.1 Papio anubis 87 0.0 1070
WERAM-Ova-0155 ENSOARP00000015317.1 Ovis aries 84 0.0 1070
WERAM-Nol-0084 ENSNLEP00000010177.1 Nomascus leucogenys 85 0.0 1068
WERAM-Otg-0089 ENSOGAP00000007382.2 Otolemur garnettii 81 0.0 1066
WERAM-Bot-0135 ENSBTAP00000019617.5 Bos taurus 83 0.0 1058
WERAM-Orc-0122 ENSOCUP00000010328.2 Oryctolagus cuniculus 82 0.0 1047
WERAM-Cap-0010 ENSCPOP00000001265.2 Cavia porcellus 81 0.0 1028
WERAM-Fec-0004 ENSFCAP00000000347.2 Felis catus 84 0.0 1017
WERAM-Mum-0102 ENSMUSP00000006301.4 Mus musculus 78 0.0 1011
WERAM-Ran-0013 ENSRNOP00000001940.7 Rattus norvegicus 79 0.0 1009
WERAM-Mim-0101 ENSMICP00000009393.1 Microcebus murinus 80 0.0 986
WERAM-Prc-0034 ENSPCAP00000003012.1 Procavia capensis 75 0.0 924
WERAM-Ocp-0111 ENSOPRP00000010943.1 Ochotona princeps 76 0.0 920
WERAM-Dio-0060 ENSDORP00000005556.1 Dipodomys ordii 80 0.0 831
WERAM-Aim-0173 ENSAMEP00000016321.1 Ailuropoda melanoleuca 84 0.0 681
WERAM-Ere-0107 ENSEEUP00000011616.1 Erinaceus europaeus 77 8e-177 617
WERAM-Tub-0035 ENSTBEP00000004172.1 Tupaia belangeri 86 3e-132 469
Created Date 25-Jun-2016