WERAM Information

Tag Content
WERAM ID WERAM-Ran-0013
Ensembl Protein ID ENSRNOP00000001940.7
Gene Name Lrwd1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000001429.7 ENSRNOT00000001940.7 ENSRNOP00000001940.7
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader WD40 1.20e-110 370.5 288 646
Organism Rattus norvegicus
Domain Profile
  Me_Reader WD40
              WD40.txt   1 dhekelsavkfepaseega....slvaatvgseavtvydcqtqgeikllqkykghdeefysvawt.......adsnkrhslLasAgdrg 78 
                           d+e++l+a++fepa eeg+    s+++at+g+eav+v+dcqt+    +l+kyk ++eef+svawt       a+++kr+ +La+Ag+rg
  ENSRNOP00000001940.7 288 DLETQLWACAFEPAREEGHsgatSQTVATCGGEAVCVIDCQTG---LVLHKYKVPGEEFFSVAWTaltvatqAGHKKRWNMLAAAGLRG 373
                           789*************986444689******************...9****************************************** PP
              WD40.txt  79 lirlldveagqcikvlvgHknaiaelkFsPkdenlllsaSfdkrvrlWdiktdklkkifeahsdevldvdyd.lrgslivSc....... 159
                           ++rll+v+ag+c+ v+++Hk+aia+l+FsP +e++l++aS+dkr++lWdi++++ ++ f+a+++++l+  +  lr+++++ c       
  ENSRNOP00000001940.7 374 MVRLLHVRAGFCCSVIRAHKKAIATLCFSPTHETHLFTASYDKRIILWDIGVPNHDYKFQASQLLTLNCSSVpLRLCPVATCpdsflla 462
                           ***************************************************************************************** PP
              WD40.txt 160 gmdgslkiWdvr....skrrvcevklvddenpeksnrrVdcvrfsngdlils.gsldntivlWdir.....kikqsevavvvLkrfeys 238
                           g++g++ +Wdvr    +k+rvcev++v++  +e s++rVd+++f+n+d+++s gs+++ti lW+++     +++qs   vv+L+++++s
  ENSRNOP00000001940.7 463 GCEGGCGCWDVRldqpQKQRVCEVNFVFSGDSEVSGQRVDGLAFVNEDVVASkGSGQGTIYLWSWSqtwasRGSQSVLPVVILAQLQWS 551
                           *****************************************************************999999****************** PP
              WD40.txt 239 kteiyyislsfsvdnkkilvsgdedgkvyvwdls........veaalkakelllk......lgkvtakimqtsvspnesiiiltaltdd 313
                            t ++y+sls ++d k+++++gde+g v+++d++        +e  l++++++lk      lg+ ++k+m+++v++n+ +++ltaltd+
  ENSRNOP00000001940.7 552 PTSLAYFSLSTCPD-KNLVLCGDEEGSVWIYDVEhllkqpppLETTLQPPTQILKwpqpvaLGQPVTKTMVNTVVANAAFTYLTALTDS 639
                           **************.************************************************************************** PP
              WD40.txt 314 nivkiWd 320
                           niv iW+
  ENSRNOP00000001940.7 640 NIVSIWK 646
                           ******8 PP
Protein Sequence
(Fasta)		MAPLTPQLLL QRGRPKTDRL GKIQSLNLSG LELLSEHLDP NLLGRLKKLK ELDLSNNLLE 60
TLPANLGLSH LRILRCTNNQ LGDVTTLHQF PELEELSLEG NPFLTVSDNL KVSFLLPKLR 120
KVNGKDTAST CSQVESLDRE LTNRVTALWQ KFIATVNPEE EANKVQADFM RSAVRDVRYG 180
PESLFEFTQW RVRMIAEELV ASGGAQAHEA NASVEHPQAA VGSKLRARKV TKRPDDDEIS 240
LPPTKRVRAS PPAQTEDSPM DAAGGQAALH LEPLHFLQCH SRNNSPKDLE TQLWACAFEP 300
AREEGHSGAT SQTVATCGGE AVCVIDCQTG LVLHKYKVPG EEFFSVAWTA LTVATQAGHK 360
KRWNMLAAAG LRGMVRLLHV RAGFCCSVIR AHKKAIATLC FSPTHETHLF TASYDKRIIL 420
WDIGVPNHDY KFQASQLLTL NCSSVPLRLC PVATCPDSFL LAGCEGGCGC WDVRLDQPQK 480
QRVCEVNFVF SGDSEVSGQR VDGLAFVNED VVASKGSGQG TIYLWSWSQT WASRGSQSVL 540
PVVILAQLQW SPTSLAYFSL STCPDKNLVL CGDEEGSVWI YDVEHLLKQP PPLETTLQPP 600
TQILKWPQPV ALGQPVTKTM VNTVVANAAF TYLTALTDSN IVSIWKTC 648
Nucleotide Sequence
(Fasta)		CAGGGGTTAG GGAGTACGGC TGGCGTTCTG CTTCCTTCCG GTCCCCTGGA CTCTCAAAGG 60
GTTTGTTGTG CGCCACCTCC TGGGCTCCCC AGCATCCGGC CTTAGTGACC AGACTTCGTG 120
GAGGCGTGGG TTCGGTTGAG CCCTCGACCA CCCATGGCTC CTCTCACGCC GCAGCTGCTC 180
CTGCAACGTG GGCGACCCAA GACCGACAGG CTGGGGAAGA TTCAGAGTCT GAATCTGTCA 240
GGGCTGGAGC TGCTCTCAGA ACACTTGGAT CCCAATCTCC TGGGACGCCT GAAGAAGCTG 300
AAGGAACTTG ACCTCTCTAA CAACTTGCTG GAAACATTGC CTGCTAACCT AGGCCTGTCC 360
CATCTGCGAA TCCTTCGCTG TACCAACAAC CAGCTAGGGG ACGTCACCAC CTTGCACCAG 420
TTCCCGGAAC TTGAGGAGCT CAGTCTGGAA GGCAACCCTT TCCTGACGGT CAGTGACAAC 480
CTCAAAGTCT CCTTTCTCCT GCCCAAGCTG CGTAAGGTCA ATGGCAAGGA CACGGCCTCC 540
ACCTGCTCAC AGGTAGAGAG CCTAGATCGG GAGCTGACCA ACAGGGTCAC AGCCCTCTGG 600
CAGAAGTTCA TAGCCACTGT GAACCCTGAG GAGGAAGCTA ACAAAGTGCA GGCCGACTTC 660
ATGAGGTCCG CAGTCAGGGA TGTGCGTTAC GGGCCCGAGT CTCTCTTCGA GTTCACGCAG 720
TGGCGGGTGC GGATGATCGC TGAGGAACTG GTGGCCTCAG GTGGGGCCCA GGCCCACGAA 780
GCTAATGCAT CAGTGGAACA TCCCCAGGCA GCAGTTGGCT CCAAGCTCAG GGCCAGAAAG 840
GTAACAAAAC GTCCAGATGA TGACGAAATC AGCCTTCCTC CCACCAAGCG AGTGCGGGCC 900
TCCCCACCAG CCCAGACTGA GGACAGTCCT ATGGATGCTG CTGGAGGCCA GGCCGCCCTA 960
CACCTGGAGC CCCTGCACTT CCTGCAGTGC CACAGCAGAA ACAACAGCCC TAAGGACCTG 1020
GAGACCCAGC TGTGGGCCTG TGCCTTTGAG CCGGCCCGGG AGGAGGGACA CTCGGGGGCC 1080
ACATCCCAGA CCGTGGCCAC ATGTGGCGGA GAAGCTGTTT GCGTGATAGA CTGCCAGACA 1140
GGCCTCGTGC TCCATAAATA CAAGGTTCCG GGCGAGGAGT TCTTCTCAGT GGCCTGGACA 1200
GCCCTGACGG TGGCCACCCA GGCAGGCCAC AAGAAGCGCT GGAACATGCT GGCAGCTGCA 1260
GGCCTTCGGG GCATGGTGCG GCTGCTCCAT GTGCGTGCGG GCTTCTGCTG CAGCGTCATC 1320
AGGGCCCATA AGAAGGCCAT CGCCACCCTC TGCTTCAGCC CCACCCATGA GACTCACCTC 1380
TTCACTGCCT CCTATGACAA ACGGATCATC CTCTGGGACA TTGGGGTGCC CAACCACGAC 1440
TACAAGTTCC AGGCTAGCCA GCTCCTCACG CTCAACTGCA GTTCCGTCCC TTTGCGCCTC 1500
TGTCCTGTTG CCACCTGCCC GGACAGCTTC CTGCTGGCTG GCTGTGAGGG AGGCTGCGGC 1560
TGCTGGGATG TTCGGCTAGA CCAGCCCCAG AAGCAAAGGG TGTGTGAGGT GAATTTCGTC 1620
TTCTCTGGGG ACTCCGAGGT GTCGGGACAA AGAGTGGATG GGCTGGCATT TGTGAACGAA 1680
GATGTGGTGG CCTCCAAAGG GAGTGGACAG GGCACCATCT ACCTGTGGAG CTGGAGCCAG 1740
ACATGGGCAA GCCGGGGCAG CCAGTCGGTG TTGCCTGTAG TCATCCTGGC CCAGCTGCAG 1800
TGGTCACCCA CCAGCCTGGC CTACTTCTCA CTGAGCACCT GTCCTGACAA AAACCTCGTG 1860
CTGTGTGGAG ACGAGGAAGG CAGTGTGTGG ATCTACGATG TTGAACACCT ACTGAAGCAG 1920
CCACCTCCAC TTGAAACAAC TCTGCAGCCC CCAACACAGA TCCTGAAGTG GCCTCAGCCA 1980
GTAGCATTGG GCCAACCAGT GACCAAGACC ATGGTAAACA CAGTCGTGGC CAATGCAGCC 2040
TTCACCTACC TCACTGCTCT GACGGACTCC AACATCGTGT CCATCTGGAA GACATGCTAG 2100
CCCGCCCAAG GCAGTGTGTC AGGACATGGC TTATTAGCTT GGGCCTAGTG CTAGAGGGGT 2160
TTGTACCAGT GAGTATTTTT TATTAAATTC TACTGTCGGA AGTGAGTGCA GTCACACAG 2220
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Mum-0102 ENSMUSP00000006301.4 Mus musculus 90 0.0 1142
WERAM-Sus-0173 ENSSSCP00000021661.1 Sus scrofa 79 0.0 994
WERAM-Tut-0164 ENSTTRP00000014076.1 Tursiops truncatus 78 0.0 988
WERAM-Loa-0076 ENSLAFP00000005701.3 Loxodonta africana 78 0.0 986
WERAM-Myl-0116 ENSMLUP00000009526.2 Myotis lucifugus 78 0.0 986
WERAM-Dan-0064 ENSDNOP00000006444.3 Dasypus novemcinctus 78 0.0 981
WERAM-Mup-0181 ENSMPUP00000015856.1 Mustela putorius furo 78 0.0 980
WERAM-Ict-0065 ENSSTOP00000005680.2 Ictidomys tridecemlineatus 77 0.0 979
WERAM-Mam-0100 ENSMMUP00000015768.2 Macaca mulatta 79 0.0 978
WERAM-Poa-0159 ENSPPYP00000019572.2 Pongo abelii 79 0.0 976
WERAM-Caj-0168 ENSCJAP00000029831.2 Callithrix jacchus 78 0.0 976
WERAM-Caf-0147 ENSCAFP00000020197.3 Canis familiaris 78 0.0 975
WERAM-Eqc-0135 ENSECAP00000015157.1 Equus caballus 77 0.0 972
WERAM-Hos-0172 ENSP00000292616.5 Homo sapiens 78 0.0 971
WERAM-Pat-0162 ENSPTRP00000033454.4 Pan troglodytes 78 0.0 970
WERAM-Gog-0202 ENSGGOP00000025398.1 Gorilla gorilla 78 0.0 969
WERAM-Chs-0214 ENSCSAP00000014105.1 Chlorocebus sabaeus 78 0.0 967
WERAM-Orc-0122 ENSOCUP00000010328.2 Oryctolagus cuniculus 76 0.0 959
WERAM-Paa-0219 ENSPANP00000008728.1 Papio anubis 77 0.0 957
WERAM-Cap-0010 ENSCPOP00000001265.2 Cavia porcellus 76 0.0 953
WERAM-Otg-0089 ENSOGAP00000007382.2 Otolemur garnettii 72 0.0 944
WERAM-Nol-0084 ENSNLEP00000010177.1 Nomascus leucogenys 76 0.0 936
WERAM-Ptv-0187 ENSPVAP00000016762.1 Pteropus vampyrus 75 0.0 934
WERAM-Bot-0135 ENSBTAP00000019617.5 Bos taurus 74 0.0 924
WERAM-Ova-0155 ENSOARP00000015317.1 Ovis aries 74 0.0 923
WERAM-Fec-0004 ENSFCAP00000000347.2 Felis catus 76 0.0 902
WERAM-Ocp-0111 ENSOPRP00000010943.1 Ochotona princeps 71 0.0 874
WERAM-Mim-0101 ENSMICP00000009393.1 Microcebus murinus 70 0.0 835
WERAM-Prc-0034 ENSPCAP00000003012.1 Procavia capensis 66 0.0 808
WERAM-Dio-0060 ENSDORP00000005556.1 Dipodomys ordii 76 0.0 803
WERAM-Aim-0173 ENSAMEP00000016321.1 Ailuropoda melanoleuca 78 0.0 650
WERAM-Ere-0107 ENSEEUP00000011616.1 Erinaceus europaeus 74 7e-172 601
WERAM-Tub-0035 ENSTBEP00000004172.1 Tupaia belangeri 78 2e-129 460
WERAM-Drm-0044 FBpp0079870 Drosophila melanogaster 26 7e-09 60.1
WERAM-Cii-0036 ENSCINP00000014284.3 Ciona intestinalis 32 1e-06 52.4
WERAM-Orla-0001 ENSORLP00000000076.1 Oryzias latipes 31 8e-06 49.7
Created Date 25-Jun-2016