WERAM Information


Tag Content
WERAM ID WERAM-Leo-0082
Ensembl Protein ID ENSLOCP00000011105.1
Gene Name hdac4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLOCG00000009104.1 ENSLOCT00000011121.1 ENSLOCP00000011105.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 1.10e-149 498.2 52 963
HDAC Class-I 2.60e-32 112.8 95 927
Organism Lepisosteus oculatus
Domain Profile
  HDAC Class-II

           class-2.txt 39 eagllekleelkarkatkeelqlvHseehvelletaeklekeeles 84
+++ +++ + +++ + ++e+l H++++ e++++++ + + ++
ENSLOCP00000011105.1 52 QKQQIQRQLLIAEFQRQHEQLSRQHEAQLQEHVKHQQDMLALKHQQ 97
4444444444444444444444444444444444333222221111 PP
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84
+glvyd+ m khq++++n+++hpE+++Riq+i+srlqe+gl++k+e++++rkat+eelq+vHse+hv l++t+ +++l+s
ENSLOCP00000011105.1 629 TGLVYDSLMQKHQCMCGNTNTHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHVLLYGTN--PLRQKLDSsvtpmf 715
79***********************************************************************..55677887889*** PP
class-2.txt 85 .......ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkil 166
++vdsd+i++e++s++aarlavG+v+elv+kv++gelkngfavvRPPGHHaeest+mGFC+fn+va+aakllq +l+v+kil
ENSLOCP00000011105.1 716 vrlpcggIGVDSDTIWNEVHSSSAARLAVGSVIELVFKVASGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQLRLNVSKIL 804
***************************************************************************************** PP
class-2.txt 167 ivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvlpiakeF 252
ivDwDvHhGnGtq++fy dp+vly+SlHRyd+g+ffp gsga++evg ++g+gfnvN+a++ggl m daeylaafr+vv+pia+eF
ENSLOCP00000011105.1 805 IVDWDVHHGNGTQQAFYGDPNVLYVSLHRYDDGNFFP--GSGAPEEVGIDAGVGFNVNMAFTGGLeppMEDAEYLAAFRTVVMPIANEF 891
*************************************..************************************************** PP
class-2.txt 253 kPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
+Pd+vlvs+GfDa+eg +plgg++vtakc+++ltkql++laggrvvl+lEGG++l+ai++a+ea+v+aLlg
ENSLOCP00000011105.1 892 APDVVLVSSGFDAVEGhpSPLGGYKVTAKCFGYLTKQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLG 963
****************999***************************************************96 PP

  HDAC Class-I

           class-1.txt  35 lnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeels 80 
+ +l ++ + k+ + +e+ k+++e+ +++lk+ e +++ ++
ENSLOCP00000011105.1 95 HQQELLEHQR-KMEKHRHEQEMEKHQREQKLQLLKNKERGQESAVA 139
2222222222.22344556788888888888888888777666433 PP
class-1.txt 17 gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyiefl..kkvepenaeelskelkkf...nvgedc.Pvfdglf 99
+++hp r++ + + + + gl k e ++ +ka+ eel+++hse+++ + + +++ +++++ + + ++g d+ + ++++
ENSLOCP00000011105.1 647 TNTHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHVLLYgtNPLRQKLDSSVTPMFVRLpcgGIGVDSdTIWNEVH 735
56788999999999999999*************************99986541133444445555544444422255556524677776 PP
class-1.txt 100 ey..cqlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivla..ilellkkhkrvlyididlhhGDgveeafytt 182
+ ++l G+ +e + k+ ++e + a+ G hha s Gfcy n + +a +l+l+ + +++l +d d+hhG+g ++afy
ENSLOCP00000011105.1 736 SSsaARLAVGSVIELVFKVASGELKngFAVVRPPG-HHAEESTPMGFCYFNSVAIAakLLQLRLNVSKILIVDWDVHHGNGTQQAFYGD 823
54115677899999999999988762255555555.****************999733688999************************* PP
class-1.txt 183 drvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdg....idDesyekifksviskvieafePeavvlqcGaDslagD..rl 264
v+ vs+h+y++ +ffPg+G ++vg + g + vn+ ++ g ++D +y + f++v+ ++ + f P++v++ G D++ g +l
ENSLOCP00000011105.1 824 PNVLYVSLHRYDDgNFFPGSGAPEEVGIDAGVGFNVNMAFTGGleppMEDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHpsPL 912
***********9746***********************98777333368*********************************9863369 PP
class-1.txt 265 gefnlsikghaecvk 279
g ++++ k ++ k
ENSLOCP00000011105.1 913 GGYKVTAKCFGYLTK 927
999999998887655 PP

Protein Sequence
(Fasta)
PSAVDVSAAL PLQVSPTAIP MDLRVDHQFS LASADPSLRE QQLQQELIAL KQKQQIQRQL 60
LIAEFQRQHE QLSRQHEAQL QEHVKHQQDM LALKHQQELL EHQRKMEKHR HEQEMEKHQR 120
EQKLQLLKNK ERGQESAVAS TEVKMRLQEF VLNKKKALAQ RNLNHCMPND PRFWYGKTQH 180
SSLDQSSPPQ TGISATYNHP VLGMYDPKDD FPLRKTASEP NLKLRSRLKQ KVTERRSSPL 240
LRRKDGPVTT AKKRPLDVAE SACNSAPGSG PSSPNNSSNN ITTENGIAGS VSSSPAEPSL 300
AHRLVNREGS VNQLSLYTSP SLPNITLGLP ATGPSSVATG QQEGDRLAVP ALQQGLPITT 360
PFIPSAHLPS YLSASPLDRD GGTTHNPLIQ HMVLLEQSAA QNPLVTGLGA LPLHAQSLVG 420
ASAAGGERVS PTIHKLRQHR PLGRTQSAPL PQNAQALQQL VIQQQHQQFL EKHKQQFQQQ 480
QLHINKMITK PSEPSRQHES HPEETEEELR EHQALPDQAC GASEVKDGLP HGVRVKQEPL 540
ENEEEEQQQE ELEHRKRQAE QELLFRQQAL LLEQQRIHQL RNYQASLEAA GLSVNFGGHR 600
PLSRAQSSPA SATFPITVQE PPTKPRFTTG LVYDSLMQKH QCMCGNTNTH PEHAGRIQSI 660
WSRLQETGLR GKCECIRGRK ATLEELQTVH SEAHVLLYGT NPLRQKLDSS VTPMFVRLPC 720
GGIGVDSDTI WNEVHSSSAA RLAVGSVIEL VFKVASGELK NGFAVVRPPG HHAEESTPMG 780
FCYFNSVAIA AKLLQLRLNV SKILIVDWDV HHGNGTQQAF YGDPNVLYVS LHRYDDGNFF 840
PGSGAPEEVG IDAGVGFNVN MAFTGGLEPP MEDAEYLAAF RTVVMPIANE FAPDVVLVSS 900
GFDAVEGHPS PLGGYKVTAK CFGYLTKQLM GLAGGRVVLA LEGGHDLTAI CDASEACVSA 960
LLGNEPDPFP QDVLQQRPNP NAVRSMEKVL EIHSKYWRSV QRFASTVGYS VIEAQKCETE 1020
EAETVTAMAS LSVATKQMEK RPEDEPMEEE PPL 1053
Nucleotide Sequence
(Fasta)
CCTTCTGCAG TTGATGTGAG CGCAGCACTG CCTCTGCAAG TTTCCCCAAC TGCAATTCCC 60
ATGGACCTGC GGGTGGATCA CCAGTTCTCC CTTGCCTCTG CTGACCCGAG CCTGCGGGAG 120
CAGCAGCTGC AGCAGGAGCT CATTGCGCTC AAGCAGAAGC AGCAGATCCA GAGGCAGCTC 180
CTCATCGCCG AGTTCCAGCG ACAGCACGAG CAGCTCTCTC GCCAGCATGA GGCCCAGCTC 240
CAAGAGCATG TCAAGCATCA GCAGGATATG CTAGCCCTGA AGCATCAGCA GGAGTTGCTG 300
GAGCACCAGC GCAAAATGGA GAAACACCGC CATGAGCAGG AGATGGAAAA ACACCAGAGG 360
GAGCAGAAAC TGCAGCTTCT CAAAAACAAG GAACGTGGCC AAGAAAGTGC AGTGGCTAGT 420
ACAGAAGTGA AGATGAGACT CCAGGAGTTT GTGCTTAACA AGAAGAAGGC TTTGGCACAG 480
AGAAACCTCA ACCACTGCAT GCCAAATGAC CCCCGCTTCT GGTATGGGAA AACACAGCAC 540
AGCTCTTTGG ACCAGAGTTC TCCGCCTCAG ACCGGGATTT CAGCCACTTA CAATCACCCG 600
GTTTTGGGAA TGTATGATCC CAAAGATGAC TTCCCACTTC GAAAAACAGC ATCTGAACCA 660
AACCTGAAGC TGCGATCCCG ACTAAAGCAG AAAGTAACCG AAAGGAGGAG CAGTCCTCTG 720
TTACGAAGAA AAGATGGCCC CGTCACCACT GCAAAAAAGC GTCCCCTGGA TGTTGCAGAA 780
TCTGCATGCA ACAGTGCTCC TGGTTCTGGA CCAAGCTCTC CTAATAACAG CTCCAACAAC 840
ATCACTACAG AGAATGGGAT TGCGGGATCT GTGTCCAGCA GCCCAGCTGA GCCATCCTTA 900
GCTCACAGAC TTGTGAATCG GGAAGGATCA GTGAATCAGC TGTCTCTGTA CACATCACCT 960
TCTCTACCCA ATATCACATT AGGATTGCCA GCCACTGGGC CATCTAGTGT GGCCACTGGC 1020
CAGCAGGAAG GCGACAGATT GGCCGTTCCA GCTCTCCAGC AGGGCTTGCC TATAACCACT 1080
CCCTTCATCC CCAGTGCGCA TTTGCCATCA TACCTGAGCG CTTCTCCACT AGACAGGGAT 1140
GGGGGCACCA CACACAACCC CCTTATACAG CACATGGTTT TGTTGGAGCA GTCTGCAGCA 1200
CAGAACCCCT TGGTTACTGG CCTGGGCGCC TTGCCCCTCC ACGCTCAGTC ACTTGTCGGG 1260
GCCTCAGCTG CTGGGGGCGA GAGGGTGTCA CCCACCATCC ACAAGCTGAG GCAGCACCGC 1320
CCTCTAGGCC GCACACAGTC TGCCCCCCTG CCCCAGAACG CCCAGGCCCT GCAGCAGCTC 1380
GTAATCCAGC AGCAGCATCA GCAGTTCCTG GAGAAACACA AACAACAGTT CCAGCAGCAG 1440
CAACTCCATA TCAACAAGAT GATCACAAAG CCGAGTGAGC CAAGTAGGCA GCACGAGAGC 1500
CACCCTGAGG AGACAGAGGA GGAGCTGAGG GAGCACCAGG CCCTGCCTGA CCAGGCGTGT 1560
GGGGCCAGCG AGGTGAAGGA TGGCTTGCCA CATGGAGTAC GGGTCAAGCA AGAGCCTCTG 1620
GAGAATGAGG AGGAGGAGCA GCAGCAGGAG GAGCTGGAGC ATCGCAAGAG GCAGGCCGAG 1680
CAGGAGCTCC TCTTCAGGCA GCAAGCCCTC TTACTAGAGC AGCAGAGGAT CCACCAGCTG 1740
AGGAACTACC AGGCCTCACT GGAAGCTGCC GGGCTGTCTG TGAACTTCGG AGGCCATCGC 1800
CCCCTGTCCA GAGCACAATC ATCCCCCGCT TCTGCCACCT TCCCTATCAC CGTCCAGGAA 1860
CCCCCCACCA AACCACGCTT CACCACTGGC CTGGTGTATG ACAGCCTGAT GCAGAAGCAC 1920
CAGTGCATGT GTGGCAATAC CAACACACAC CCGGAGCACG CCGGCCGCAT CCAGAGCATC 1980
TGGTCCCGTC TGCAGGAGAC CGGCCTGCGC GGGAAGTGTG AGTGTATCCG TGGAAGGAAA 2040
GCCACTCTGG AAGAGCTGCA GACAGTCCAC TCAGAAGCCC ACGTCCTGCT CTATGGAACA 2100
AACCCACTCA GGCAGAAATT GGACAGTTCT GTGACACCCA TGTTTGTGAG GCTGCCCTGC 2160
GGTGGTATCG GAGTGGACAG TGACACAATC TGGAATGAAG TTCACTCCTC CAGTGCCGCC 2220
CGGTTAGCTG TAGGCTCTGT CATCGAGCTC GTCTTCAAAG TTGCCTCTGG AGAGTTGAAG 2280
AATGGCTTTG CAGTTGTCCG ACCCCCTGGC CACCATGCAG AGGAGAGCAC TCCAATGGGA 2340
TTTTGCTACT TCAACTCCGT GGCCATTGCT GCAAAACTTC TGCAACTCAG ACTCAATGTT 2400
AGCAAGATCT TAATAGTAGA TTGGGATGTT CACCATGGCA ATGGAACACA ACAAGCTTTC 2460
TATGGTGACC CCAATGTTCT TTACGTGTCT CTCCACCGCT ACGATGATGG CAACTTCTTT 2520
CCAGGCAGTG GAGCACCTGA AGAGGTTGGC ATTGATGCAG GAGTGGGATT TAATGTCAAC 2580
ATGGCTTTCA CTGGGGGACT GGAGCCTCCT ATGGAGGATG CTGAGTACCT AGCAGCTTTC 2640
AGGACTGTGG TAATGCCCAT TGCAAATGAG TTTGCTCCTG ATGTCGTTCT GGTTTCTTCA 2700
GGATTCGATG CTGTGGAGGG ACACCCATCC CCGCTTGGAG GATACAAAGT GACAGCTAAG 2760
TGTTTTGGCT ACCTGACGAA GCAGCTGATG GGATTGGCTG GGGGCCGTGT AGTGCTAGCT 2820
TTGGAAGGGG GTCATGACCT CACCGCCATT TGCGATGCAT CCGAAGCATG TGTTTCTGCT 2880
TTACTGGGAA ACGAGCCTGA TCCCTTTCCA CAAGATGTCC TTCAGCAGAG GCCTAATCCT 2940
AATGCGGTGC GATCCATGGA AAAGGTCCTG GAAATTCACA GTAAATACTG GCGATCCGTG 3000
CAGCGCTTTG CGTCTACGGT CGGCTACTCT GTGATCGAAG CTCAGAAGTG TGAAACCGAG 3060
GAAGCGGAGA CTGTCACAGC CATGGCCTCT TTATCAGTCG CAACCAAACA GATGGAGAAA 3120
AGGCCAGAGG ACGAACCGAT GGAGGAAGAG CCACCATTGT AG 3163
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Dar-0198 ENSDARP00000131327.1 Danio rerio 85 0.0 1553
WERAM-Gaga-0049 ENSGALP00000033098.3 Gallus gallus 83 0.0 1496
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 83 0.0 1490
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 82 0.0 1486
WERAM-Lac-0062 ENSLACP00000008432.1 Latimeria chalumnae 82 0.0 1478
WERAM-Pes-0174 ENSPSIP00000020522.1 Pelodiscus sinensis 82 0.0 1470
WERAM-Myl-0159 ENSMLUP00000013297.2 Myotis lucifugus 81 0.0 1467
WERAM-Mup-0001 ENSMPUP00000000123.1 Mustela putorius furo 80 0.0 1462
WERAM-Sus-0169 ENSSSCP00000025173.1 Sus scrofa 81 0.0 1460
WERAM-Pat-0104 ENSPTRP00000022412.3 Pan troglodytes 80 0.0 1460
WERAM-Bot-0159 ENSBTAP00000023621.5 Bos taurus 80 0.0 1456
WERAM-Hos-0025 ENSP00000264606.3 Homo sapiens 80 0.0 1456
WERAM-Chs-0068 ENSCSAP00000002314.1 Chlorocebus sabaeus 80 0.0 1452
WERAM-Mum-0077 ENSMUSP00000008995.8 Mus musculus 82 0.0 1451
WERAM-Ran-0135 ENSRNOP00000027622.5 Rattus norvegicus 82 0.0 1449
WERAM-Cap-0143 ENSCPOP00000011770.2 Cavia porcellus 80 0.0 1449
WERAM-Aim-0131 ENSAMEP00000011965.1 Ailuropoda melanoleuca 79 0.0 1444
WERAM-Anc-0099 ENSACAP00000009498.3 Anolis carolinensis 77 0.0 1442
WERAM-Caf-0133 ENSCAFP00000018541.3 Canis familiaris 80 0.0 1436
WERAM-Ict-0095 ENSSTOP00000009983.2 Ictidomys tridecemlineatus 81 0.0 1434
WERAM-Anp-0035 ENSAPLP00000004005.1 Anas platyrhynchos 80 0.0 1426
WERAM-Fec-0140 ENSFCAP00000013207.3 Felis catus 80 0.0 1417
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 83 0.0 1409
WERAM-Dan-0037 ENSDNOP00000003826.3 Dasypus novemcinctus 79 0.0 1391
WERAM-Gog-0157 ENSGGOP00000013985.2 Gorilla gorilla 76 0.0 1372
WERAM-Mam-0041 ENSMMUP00000007984.2 Macaca mulatta 77 0.0 1366
WERAM-Loa-0107 ENSLAFP00000009167.2 Loxodonta africana 76 0.0 1363
WERAM-Poa-0116 ENSPPYP00000014905.2 Pongo abelii 78 0.0 1362
WERAM-Xet-0035 ENSXETP00000010592.2 Xenopus tropicalis 76 0.0 1327
WERAM-Xim-0022 ENSXMAP00000002092.1 Xiphophorus maculatus 73 0.0 1322
WERAM-Otg-0061 ENSOGAP00000004404.2 Otolemur garnettii 76 0.0 1318
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 83 0.0 1311
WERAM-Pof-0029 ENSPFOP00000001978.1 Poecilia formosa 72 0.0 1285
WERAM-Asm-0146 ENSAMXP00000013789.1 Astyanax mexicanus 73 0.0 1274
WERAM-Tar-0171 ENSTRUP00000035900.1 Takifugu rubripes 75 0.0 1253
WERAM-Ten-0099 ENSTNIP00000000138.1 Tetraodon nigroviridis 73 0.0 1250
WERAM-Orn-0012 ENSONIP00000001222.1 Oreochromis niloticus 74 0.0 1224
WERAM-Dio-0038 ENSDORP00000004330.1 Dipodomys ordii 70 0.0 1196
WERAM-Gaa-0148 ENSGACP00000019223.1 Gasterosteus aculeatus 68 0.0 1157
WERAM-Paa-0012 ENSPANP00000003104.1 Papio anubis 82 0.0 934
WERAM-Caj-0101 ENSCJAP00000017313.2 Callithrix jacchus 81 0.0 927
WERAM-Nol-0183 ENSNLEP00000020216.1 Nomascus leucogenys 55 0.0 896
WERAM-Eqc-0153 ENSECAP00000016533.1 Equus caballus 55 0.0 885
WERAM-Mod-0016 ENSMODP00000001749.3 Monodelphis domestica 55 0.0 880
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 54 0.0 877
WERAM-Sah-0044 ENSSHAP00000005074.1 Sarcophilus harrisii 61 0.0 849
WERAM-Ova-0200 ENSOARP00000020106.1 Ovis aries 80 0.0 849
WERAM-Tut-0038 ENSTTRP00000002947.1 Tursiops truncatus 74 0.0 807
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 51 0.0 787
WERAM-Orla-0199 ENSORLP00000022663.1 Oryzias latipes 82 0.0 786
WERAM-Ptv-0078 ENSPVAP00000007254.1 Pteropus vampyrus 63 0.0 786
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 79 0.0 759
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 71 0.0 702
WERAM-Mae-0089 ENSMEUP00000008883.1 Macropus eugenii 83 0.0 649
WERAM-Orc-0081 ENSOCUP00000007421.3 Oryctolagus cuniculus 70 0.0 648
WERAM-Ocp-0087 ENSOPRP00000007869.2 Ochotona princeps 70 0.0 645
WERAM-Prc-0092 ENSPCAP00000008303.1 Procavia capensis 70 0.0 644
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 69 5e-175 612
WERAM-Mim-0022 ENSMICP00000002393.1 Microcebus murinus 68 2e-174 610
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 54 2e-153 541
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 59 3e-149 527
WERAM-Ect-0082 ENSETEP00000009275.1 Echinops telfairi 62 5e-141 499
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 50 7e-124 442
WERAM-Tub-0137 ENSTBEP00000014805.1 Tupaia belangeri 73 4e-123 440
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 50 3e-122 437
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 60 3e-122 437
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 55 5e-84 310
WERAM-Sem-0010 EFJ19764 Selaginella moellendorffii 46 7e-80 296
Created Date 25-Jun-2016