WERAM Information

Tag Content
WERAM ID WERAM-Chg-0030
Ensembl Protein ID EAQ86364
Gene Name CHGG_07617
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
CHGG_07617 EAQ86364 EAQ86364
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC HD2 1.6 32
Organism Chaetomium globosum
Domain Profile
  HDAC HD2
Query: 543 PHCDFTTVGPHPNYKMAKHERTKKHRENTGQAPGPQ----FPCAWCTTSFTGGDNLREHV 598
           PH    T  PHP+ +  K+       E + Q   P+    F C  CT +FT    L+ H 
Sbjct: 229 PHVHVAT--PHPSKQAGKNSGGGSTGETSKQQQTPKSAGAFGCKSCTRTFTSEMGLQSHT 286
Query: 599 KKKHAGVA 606
           K KH+  A
Sbjct: 287 KAKHSAAA 294
  Database: Arabidopsis_thaliana.TAIR10.31.pep.all.fa
    Posted date:  Jun 9, 2016 10:44 AM
  Number of letters in database: 14,482,851
  Number of sequences in database:  35,386
  
Lambda     K      H
   0.314    0.130    0.412 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 35386
Number of Hits to DB: 17,051,600
Number of extensions: 737142
Number of successful extensions: 2154
Number of sequences better than 10.0: 64
Number of HSP's gapped: 2160
Number of HSP's successfully gapped: 72
Length of query: 674
Length of database: 14,482,851
Length adjustment: 107
Effective length of query: 567
Effective length of database: 10,696,549
Effective search space: 6064943283
Effective search space used: 6064943283
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)
Protein Sequence
(Fasta)		MAPSYRSPAS APPFDCNDFP MYAGLEGEPL TPPPPYAAQD LPLTAPYLNH NHQECVHTTR 60
LCEERYAHLE ALVANLERCQ CRCGQSTWSR LTKSFFGSLR TQAASLKSRT RSQKSTRSEP 120
KASRISPYKR HSSGRTRHPT TPPNDEPTEL DSSAFTPELS GTSFLSQETQ VGVRSTSFSD 180
PQGLGYAHAR HELADSSPPS EPHLAFGRSQ TQPPSFGRPV ALASAPNFHM MAQYSGQAPT 240
PPRTNPSLAT STVSHQGSGS FATPQTSMSS AASALGPDGM SAINTGFPSF STETTSSPQE 300
YEPGNMSWNA SQPTPQHPGN YTAELPAEIP DSGLGTPERG QPRAYDPVAE MEDLVPGSFM 360
SPVISLPPSQ PMPPREMPGD PRMEPAVSGW EYSPTMTTAS HLPMIPNPSY DQCYRPRAPA 420
SHFGPQPFMP QGRGIFDLYS ADTGNIHNFL TPNRYSYGQV APTPEQFDTH PTRSPQTHNA 480
PVPQPPSTPI RPHTYPLYQH QVQHSQHSQH PQHPQDHPQN HPQDHPQTQQ QHPLDSEPPL 540
HCPHCDFTTV GPHPNYKMAK HERTKKHREN TGQAPGPQFP CAWCTTSFTG GDNLREHVKK 600
KHAGVADGGG GGGGGGEGGM GGGESGEGGW RRRGGGGGGG GGGRGKRGGG RRRKTPGGGV 660
GAGADGDGGR GAGL 674
Nucleotide Sequence
(Fasta)		ATGGCCCCTT CCTATCGTTC CCCTGCTTCT GCTCCCCCAT TCGATTGCAA TGACTTTCCG 60
ATGTACGCCG GCCTTGAAGG GGAGCCGCTT ACTCCACCGC CACCATACGC GGCCCAGGAC 120
TTGCCGCTCA CGGCTCCATA TCTGAACCAC AACCATCAAG AGTGTGTCCA CACCACGCGT 180
TTGTGTGAGG AGCGCTATGC CCACCTCGAG GCTTTGGTGG CCAACCTAGA GCGCTGCCAA 240
TGCCGATGTG GACAAAGCAC CTGGAGCAGG CTGACAAAGT CCTTCTTTGG CAGTCTCAGG 300
ACACAAGCGG CATCCCTCAA GTCACGAACC AGGTCTCAGA AGTCGACCCG GTCAGAGCCC 360
AAGGCATCAC GCATATCGCC TTACAAACGT CATTCTTCCG GACGCACAAG ACATCCGACA 420
ACGCCCCCCA ACGACGAGCC CACTGAACTC GACAGTTCTG CCTTCACCCC TGAGCTGAGC 480
GGGACGTCGT TTCTGAGCCA AGAGACACAA GTTGGTGTTC GCTCGACTTC TTTTTCGGAT 540
CCCCAAGGGC TCGGGTATGC CCACGCTCGG CACGAGCTCG CCGATTCTAG CCCCCCAAGC 600
GAGCCGCATC TGGCATTCGG TCGAAGTCAA ACTCAACCTC CCAGCTTTGG TCGGCCTGTT 660
GCTCTGGCCA GTGCACCGAA TTTCCACATG ATGGCGCAAT ATTCGGGTCA AGCCCCGACA 720
CCCCCCCGGA CCAACCCAAG CCTGGCCACA TCTACGGTGT CTCATCAGGG CAGCGGCTCC 780
TTCGCCACGC CTCAAACCTC CATGTCGAGC GCCGCCTCTG CTTTGGGCCC AGACGGAATG 840
AGTGCTATTA ACACTGGCTT TCCGTCATTT TCAACAGAAA CCACATCTTC GCCCCAGGAG 900
TACGAGCCAG GCAATATGTC GTGGAACGCC TCCCAACCCA CACCGCAGCA CCCAGGTAAC 960
TACACAGCGG AACTCCCGGC AGAGATTCCT GATTCTGGGT TGGGAACGCC AGAGCGGGGC 1020
CAGCCACGAG CGTACGATCC GGTCGCGGAA ATGGAGGACC TTGTGCCCGG GTCATTCATG 1080
AGCCCTGTGA TATCCCTCCC ACCCTCACAG CCCATGCCAC CACGAGAGAT GCCCGGGGAC 1140
CCCCGCATGG AGCCGGCTGT CAGCGGTTGG GAATATTCGC CAACGATGAC TACGGCAAGC 1200
CATCTTCCCA TGATTCCGAA CCCTTCATAC GACCAATGCT ACCGCCCTCG GGCTCCCGCC 1260
TCCCACTTTG GGCCACAACC GTTCATGCCC CAGGGCCGGG GAATTTTCGA CTTGTACAGC 1320
GCCGACACAG GGAACATCCA CAACTTTCTT ACGCCTAATC GTTATTCGTA CGGTCAAGTG 1380
GCACCAACCC CCGAGCAATT TGACACCCAC CCAACACGCT CCCCCCAAAC CCACAACGCC 1440
CCAGTACCAC AACCGCCGTC GACCCCCATA CGCCCTCACA CCTACCCCCT CTATCAGCAC 1500
CAGGTTCAAC ACTCTCAACA CTCTCAACAC CCCCAACACC CTCAGGACCA CCCCCAAAAC 1560
CACCCCCAGG ACCACCCCCA AACCCAACAA CAACACCCCC TCGATTCCGA ACCCCCTCTC 1620
CACTGCCCCC ACTGCGACTT CACCACCGTC GGGCCCCACC CAAACTACAA GATGGCCAAG 1680
CACGAGCGCA CCAAAAAACA CCGCGAGAAC ACGGGCCAGG CGCCGGGGCC CCAGTTCCCG 1740
TGTGCGTGGT GTACCACGTC GTTTACCGGG GGGGATAACC TGCGGGAGCA TGTCAAGAAG 1800
AAGCATGCGG GGGTGGCGGA CGGCGGGGGT GGTGGTGGTG GTGGTGGTGA GGGTGGGATG 1860
GGGGGTGGAG AAAGTGGTGA GGGTGGATGG CGGCGGCGGG GTGGTGGTGG TGGTGGTGGT 1920
GGTGGTGGGA GGGGGAAGAG GGGCGGCGGG AGGAGGCGGA AGACGCCGGG TGGGGGTGTG 1980
GGTGCGGGTG CGGATGGGGA TGGGGGGCGG GGGGCTGGGC TTTGA 2026
Sequence Source Ensembl
Orthology
Created Date 25-Jun-2016