WERAM Information

Tag Content
WERAM ID WERAM-Brr-0194
Ensembl Protein ID Bra038624.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra038624 Bra038624.1 Bra038624.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 4.80e-14 53.2 1 42
Organism Brassica rapa
Domain Profile
  Ac_Reader Bromodomain
      BROMO.txt 30 mdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71
                   mdL ti++rl+eg+Yssp+ef++Dvrl f+N++ayn++++++
  Bra038624.1-P  1 MDLGTIRSRLREGEYSSPLEFAADVRLTFSNSMAYNPPGNQY 42
                   9************************************99876 PP
Protein Sequence
(Fasta)		MDLGTIRSRL REGEYSSPLE FAADVRLTFS NSMAYNPPGN QYHKMARDLS TYFESRWKII 60
ERKILVVEPP VMSLTSSASL EFEVPCNVAL PRKKTAEVNE GKLRVEPGKL VMTDGEEFPQ 120
NIVDLLREQS GNVDQSGEVE IEIEIDTLSD ETLFMVRKFL DEYLRDKKKS QEKSEPCEME 180
IVHDSGFSNS PLQPSKCHLL IDEDVDIVGG NDPLVSRHPP FKIEKDIACR NSSSSSSSES 240
GS 242
Nucleotide Sequence
(Fasta)		ATGGATCTTG GGACGATACG AAGCAGGCTG CGTGAAGGTG AATACTCTAG TCCTTTGGAG 60
TTCGCAGCAG ACGTGCGTCT TACATTCTCA AATTCCATGG CTTACAACCC GCCAGGAAAT 120
CAATACCATA AAATGGCTCG AGATCTCAGC ACTTATTTTG AGTCGAGATG GAAAATTATA 180
GAGAGAAAAA TACTTGTGGT GGAACCACCG GTCATGTCCC TAACCAGCTC TGCTTCTCTG 240
GAGTTTGAAG TCCCGTGTAA TGTAGCACTA CCAAGAAAGA AGACAGCTGA AGTGAATGAG 300
GGGAAGCTGA GGGTGGAGCC TGGGAAGTTG GTTATGACAG ATGGGGAAGA GTTTCCACAG 360
AACATTGTTG ATCTCCTGAG AGAGCAAAGT GGCAATGTTG ACCAATCTGG AGAAGTTGAG 420
ATTGAGATAG AAATAGATAC GCTTTCTGAT GAAACCTTGT TCATGGTTCG GAAATTCCTG 480
GATGAGTATC TAAGGGATAA AAAGAAATCA CAGGAAAAGA GTGAACCTTG TGAGATGGAG 540
ATAGTTCATG ACTCTGGATT TAGTAATTCC CCTCTGCAGC CTAGTAAATG TCATTTGCTG 600
ATTGACGAGG ATGTTGACAT AGTTGGTGGG AATGACCCCC TTGTTTCTAG GCATCCCCCT 660
TTTAAGATAG AAAAAGATAT TGCATGTAGA AACAGTTCGA GTAGCTCCAG TAGTGAATCA 720
GGCTCTTAA
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0055 Bo3g103590.1 Brassica oleracea 87 4e-120 427
WERAM-Art-0149 AT5G63320.1 Arabidopsis thaliana 73 8e-98 353
WERAM-Arl-0114 fgenesh2_kg.8__ 2334__ AT5G63330.2 Arabidopsis lyrata 74 2e-92 335
WERAM-Pot-0133 POPTR_0012s09600.1 Populus trichocarpa 51 2e-64 242
WERAM-Sol-0051 Solyc03g111090.2.1 Solanum lycopersicum 53 3e-62 235
WERAM-Viv-0104 VIT_17s0000g01830.t01 Vitis vinifera 51 2e-60 229
WERAM-Sot-0041 PGSC0003DMT400039290 Solanum tuberosum 51 1e-59 226
WERAM-Glm-0063 GLYMA06G18070.2 Glycine max 48 3e-59 225
WERAM-Prp-0035 EMJ12094 Prunus persica 49 5e-58 221
WERAM-Thc-0035 EOY22411 Theobroma cacao 51 5e-55 211
WERAM-Met-0065 KEH34972 Medicago truncatula 47 1e-54 210
WERAM-Amt-0007 ERN06807 Amborella trichopoda 46 7e-53 204
WERAM-Mua-0116 GSMUA_Achr8P08920_001 Musa acuminata 42 9e-46 180
WERAM-Lep-0030 LPERR02G18800.1 Leersia perrieri 41 1e-38 156
WERAM-Sob-0073 Sb04g025160.1 Sorghum bicolor 42 3e-38 155
WERAM-Sei-0065 Si016501m Setaria italica 40 3e-38 155
WERAM-Zem-0009 GRMZM2G006707_P01 Zea mays 40 3e-38 155
WERAM-Tra-0339 TRAES3BF028200070CFD_t1 Triticum aestivum 38 6e-38 154
WERAM-Aet-0016 EMT08210 Aegilops tauschii 38 1e-37 153
WERAM-Hov-0096 MLOC_70538.1 Hordeum vulgare 37 3e-37 152
WERAM-Tru-0018 TRIUR3_07786-P1 Triticum urartu 37 4e-37 151
WERAM-Orbr-0029 OB02G30530.1 Oryza brachyantha 40 9e-37 150
WERAM-Orp-0024 OPUNC02G21060.1 Oryza punctata 40 2e-36 149
WERAM-Orm-0027 OMERI02G22640.1 Oryza meridionalis 38 3e-36 149
WERAM-Orni-0024 ONIVA02G26010.1 Oryza nivara 38 3e-36 149
WERAM-Ori-0018 BGIOSGA006099-PA Oryza indica 38 3e-36 149
WERAM-Ors-0023 OS02T0601800-01 Oryza sativa 38 3e-36 149
WERAM-Org-0025 ORGLA02G0198800.1 Oryza glaberrima 38 3e-36 149
WERAM-Orb-0025 OBART02G23090.1 Oryza barthii 38 3e-36 149
WERAM-Orl-0061 KN539183.1_FGP004 Oryza longistaminata 38 3e-36 149
WERAM-Orr-0024 ORUFI02G24500.1 Oryza rufipogon 40 4e-36 148
WERAM-Orgl-0026 OGLUM02G23450.1 Oryza glumaepatula 38 8e-36 147
WERAM-Brd-0087 BRADI3G47960.1 Brachypodium distachyon 38 1e-34 144
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 32 1e-22 103
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 30 8e-18 87.8
WERAM-Chr-0016 EDP01011 Chlamydomonas reinhardtii 30 1e-13 73.9
WERAM-Tar-0033 ENSTRUP00000007860.1 Takifugu rubripes 56 3e-13 72.8
Created Date 25-Jun-2016