WERAM Information

Tag Content
WERAM ID WERAM-Brr-0145
Ensembl Protein ID Bra029141.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra029141 Bra029141.1 Bra029141.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Tudor 0.0048 18.1 8 135
Organism Brassica rapa
Domain Profile
  Me_Reader Tudor
      Tudor.txt  2 skvGlrVvakwssdG...yfYsgkiVvkghrvesgeeyysikyedqr 45
                   +kvG+ V+++  ++G   ++++ ki+     +  +++ ys ky d++
  Bra029141.1-P  8 FKVGEIVEVRSFEEGyrgAWFRCKIL--NIYTKEEKLFYSLKYLDYD 52
                   699999*99988899999*******6..5566678889999999997 PP
      Tudor.txt   2 skvGlrVvakwssdGyfYsgkiVvkghrvesgee 35 
                    + vG+ V+  w  dG+f+ ++++ +++  +   e
  Bra029141.1-P 104 WQVGDLVD--WDRDGCFWCATVLTVKRNEPFQIE 135
                    56677665..999*********988876665555 PP
Protein Sequence
(Fasta)		MAQASLPFKV GEIVEVRSFE EGYRGAWFRC KILNIYTKEE KLFYSLKYLD YDGEEIHHTQ 60
VYQQFEDGEE WLMVRPSYPP CYQEREVRKI EADQAPLVVV HGSWQVGDLV DWDRDGCFWC 120
ATVLTVKRNE PFQIELFPPP LGEGETYKAL RKDVRPTLDW SPEDGWTLPS TDGRKSQSVR 180
LVKREKGVDH VPGKEKTERA KKQKTERHTQ HRTERDAQQK TEGDMQPEKG NGEIRQNIDE 240
SDSIEAAVYD LEELIVRIEW IKNMLSPDVG EGSTWKYQDY RPSSK 285
Nucleotide Sequence
(Fasta)		ATGGCTCAAG CAAGCTTACC TTTCAAAGTT GGGGAAATTG TTGAAGTAAG ATCTTTTGAA 60
GAGGGATATC GTGGAGCTTG GTTTCGATGC AAGATATTAA ACATATACAC GAAGGAGGAG 120
AAATTGTTCT ACAGCTTGAA GTATCTTGAT TACGATGGGG AAGAGATACA TCACACACAA 180
GTCTATCAAC AGTTTGAAGA TGGGGAGGAG TGGCTGATGG TTCGACCATC ATATCCACCA 240
TGTTATCAGG AGCGGGAAGT CCGTAAAATC GAGGCTGACC AAGCACCTCT TGTTGTCGTT 300
CATGGCTCTT GGCAAGTAGG AGACTTGGTT GATTGGGATA GAGATGGATG TTTCTGGTGT 360
GCAACGGTCT TAACAGTGAA GAGAAACGAA CCATTCCAGA TTGAGTTGTT TCCACCACCA 420
CTCGGTGAAG GAGAAACTTA TAAAGCTTTG CGTAAGGACG TGCGTCCAAC ATTGGATTGG 480
TCACCTGAAG ATGGCTGGAC ACTGCCTTCT ACGGATGGAC GAAAAAGTCA AAGTGTTAGG 540
CTCGTGAAAC GTGAGAAAGG AGTAGATCAT GTACCTGGAA AAGAAAAAAC AGAGAGAGCC 600
AAGAAGCAGA AGACAGAGAG ACACACGCAG CACAGGACTG AGAGAGACGC GCAGCAGAAG 660
ACAGAGGGAG ACATGCAGCC AGAGAAAGGC AATGGAGAGA TTCGACAAAA TATCGATGAG 720
TCGGATTCAA TTGAAGCTGC AGTTTATGAC TTGGAAGAGC TTATCGTTCG AATTGAGTGG 780
ATAAAAAATA TGCTAAGTCC AGATGTTGGA GAAGGTTCAA CGTGGAAATA TCAAGATTAC 840
CGCCCATCTT CTAAGTGA 859
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0055 EOY05946 Theobroma cacao 46 6e-40 161
WERAM-Bro-0031 Bo2g048060.1 Brassica oleracea 44 2e-39 160
WERAM-Zem-0118 GRMZM2G343445_P03 Zea mays 39 3e-36 149
WERAM-Brd-0050 BRADI2G36700.1 Brachypodium distachyon 37 3e-31 132
WERAM-Tra-0116 Traes_3B_946313BB9.1 Triticum aestivum 36 3e-27 119
WERAM-Hov-0066 MLOC_57618.1 Hordeum vulgare 34 5e-27 118
WERAM-Orl-0012 KN538696.1_FGP117 Oryza longistaminata 38 3e-26 115
WERAM-Php-0098 PP1S43_153V6.1 Physcomitrella patens 34 1e-24 110
WERAM-Tru-0002 TRIUR3_01744-P1 Triticum urartu 32 4e-23 105
WERAM-Prp-0107 EMJ22727 Prunus persica 31 6e-08 55.5
Created Date 25-Jun-2016