WERAM Information

Tag Content
WERAM ID WERAM-Brr-0143
Ensembl Protein ID Bra028776.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra028776 Bra028776.1 Bra028776.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT SUV39 2.10e-43 148.9 463 604
Organism Brassica rapa
Domain Profile
  HMT SUV39
      SUV39.txt   1 vrLqvfktenkGwGvrclddiakgsFvciyaGeiltddeaekegleegdeyladldskesv..enlkegyesdvplssdssntrqekdkeeseyii 94 
                    v+L+vfkt ++GwG+r++d i++gsF+ciyaGe  +++++      e+d+y++d+++++++  +n++ g  ++v    ds ++ +e+ +    ++i
  Bra028776.1-P 463 VKLEVFKTVDRGWGLRSWDPIRAGSFICIYAGEAKEKEKTM-----ENDDYAFDTTRVYTAfkWNYERGLADEV----DS-EEVSEEPEMPLPLVI 548
                    69*******************************98877765.....5699***999998865566666666666....33.55666667899**** PP
      SUV39.txt  95 dakkegnvgrflnHscspNlfvqnvfvdthdlrfprvafFaskrikagtELtwdYg 150
                    + k  gnv+rf+nHscspN+f+q+v ++ + + f +vafFa  +i+++tELt+dYg
  Bra028776.1-P 549 SGKDVGNVARFMNHSCSPNVFWQPVSYEDNGQLFLHVAFFAVSHIPPMTELTYDYG 604
                    *******************************************************6 PP
Protein Sequence
(Fasta)		MEESFRSYTD KTSVYDIKPL RTLKPVFPSG NHQSPPPFVC SPPFGPFPPG FSPFYPFTSS 60
QPHTHNNSNP SSVTPLRSFR SDAEGSTPKR KTPKKLVRPD NVNFESGITS PERENGNRNL 120
VTSVLTRYEA LRRRFSQLED AREAVSGINK RADLKAGSTC MSRGVRTNTK KRPGIVPGVE 180
IGDIFFFRFE MCLVGLHSPS MAGIDYLLLK GDTEEEDTIT IATSIVSSGY YDNEEGDPDV 240
LVYTGQGGGN ADKEKQTSDQ KLERGNLALE KSLVRNSPVR VIRGLKEASP SVKIYLYDGL 300
YEVKESWVEK GKLGHNTFKY KLVRAPGQPP AFATWIGIQK WKGGLTSREG LILADLSSGV 360
ESIGVSLVNE VDDENGPGYF TYSTKVTYSE SFKLTQPSIG CCDCSSSCKP GSLNFRCVRR 420
NGGDYPYCGN GVLVSRKGMV YECSSSCPCL VCKLKVTQMG VKVKLEVFKT VDRGWGLRSW 480
DPIRAGSFIC IYAGEAKEKE KTMENDDYAF DTTRVYTAFK WNYERGLADE VDSEEVSEEP 540
EMPLPLVISG KDVGNVARFM NHSCSPNVFW QPVSYEDNGQ LFLHVAFFAV SHIPPMTELT 600
YDYGVTRPSG AQNGDTLYGM KKCFCGSEYC RGSFG 635
Nucleotide Sequence
(Fasta)		ATGGAAGAGA GTTTCAGAAG CTACACTGAT AAGACGAGTG TGTACGATAT CAAACCATTA 60
CGCACACTAA AACCCGTTTT CCCCAGCGGG AATCATCAAT CTCCACCACC TTTCGTCTGC 120
TCACCTCCTT TCGGTCCTTT CCCTCCTGGC TTCTCCCCTT TCTATCCCTT CACCTCCTCT 180
CAACCACACA CTCATAACAA CTCAAACCCT TCCTCTGTCA CTCCTCTAAG ATCATTCAGG 240
TCTGACGCGG AGGGTTCAAC TCCGAAGAGA AAGACCCCGA AAAAGCTTGT TCGTCCTGAT 300
AATGTAAACT TCGAGAGCGG CATCACCTCT CCCGAAAGAG AGAACGGTAA CAGAAACTTG 360
GTCACGAGCG TTCTCACGCG CTACGAGGCC TTGAGAAGAA GATTCTCACA GCTGGAGGAC 420
GCGAGAGAAG CTGTAAGCGG GATCAACAAA CGCGCCGATT TAAAAGCGGG ATCCACTTGC 480
ATGAGCCGTG GCGTACGCAC AAACACCAAG AAACGACCTG GTATAGTCCC CGGCGTTGAG 540
ATCGGTGACA TATTCTTCTT CAGGTTCGAG ATGTGTTTGG TCGGGCTGCA TTCTCCATCG 600
ATGGCTGGCA TTGACTATCT TCTCCTCAAG GGAGATACAG AAGAAGAAGA TACCATCACT 660
ATCGCAACTA GCATCGTCTC GTCTGGTTAC TACGATAACG AAGAAGGTGA TCCGGATGTT 720
TTGGTTTACA CCGGTCAGGG CGGTGGTAAC GCTGATAAAG AGAAGCAAAC CTCGGATCAA 780
AAGCTGGAAA GAGGTAATTT AGCGTTGGAG AAGAGCTTGG TTAGGAACAG TCCGGTTCGG 840
GTCATAAGAG GGTTGAAAGA GGCGTCTCCT AGTGTTAAAA TCTATCTTTA CGATGGGCTC 900
TACGAGGTGA AAGAGTCGTG GGTGGAGAAA GGGAAGTTGG GACATAATAC TTTTAAGTAT 960
AAGCTAGTGA GAGCTCCTGG TCAGCCTCCA GCTTTCGCCA CGTGGATAGG GATACAAAAG 1020
TGGAAAGGTG GGTTGACTTC GAGGGAAGGG CTTATACTCG CTGATCTCTC TTCGGGAGTT 1080
GAAAGCATTG GTGTGTCGCT TGTGAATGAA GTTGATGACG AGAACGGTCC TGGTTATTTC 1140
ACTTACTCCA CAAAGGTGAC TTACTCGGAG TCTTTTAAGC TGACGCAGCC TTCTATTGGA 1200
TGTTGTGACT GTAGCAGCTC GTGCAAGCCG GGGAGCTTGA ACTTTCGCTG CGTGAGGAGA 1260
AACGGAGGTG ATTATCCTTA CTGTGGGAAT GGAGTTTTGG TTAGCCGCAA GGGTATGGTG 1320
TATGAATGCA GCTCGTCTTG TCCGTGCTTG GTTTGCAAAC TCAAGGTGAC TCAAATGGGA 1380
GTCAAAGTGA AACTTGAAGT GTTCAAGACG GTGGATAGAG GATGGGGGTT GAGGTCGTGG 1440
GATCCTATCC GTGCTGGTTC GTTTATATGT ATATACGCAG GTGAGGCTAA AGAGAAGGAG 1500
AAGACTATGG AGAATGATGA TTACGCTTTT GATACGACTC GTGTGTATAC CGCTTTTAAA 1560
TGGAACTATG AGCGTGGTTT AGCGGATGAG GTTGATTCGG AAGAGGTGTC TGAAGAACCT 1620
GAAATGCCGT TGCCTCTTGT AATCAGTGGT AAGGATGTTG GGAACGTTGC ACGGTTTATG 1680
AACCATAGTT GCTCACCTAA TGTTTTCTGG CAGCCGGTTA GTTATGAAGA TAATGGTCAG 1740
CTCTTCTTGC ATGTTGCTTT CTTTGCCGTT TCTCACATTC CTCCCATGAC TGAGTTGACT 1800
TATGACTATG GAGTTACTCG ACCAAGTGGA GCTCAAAATG GTGATACATT GTATGGCATG 1860
AAGAAGTGCT TTTGTGGATC AGAGTATTGC CGTGGTTCAT TTGGTTGA 1909
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0023 Bo2g006760.1 Brassica oleracea 93 0.0 1092
WERAM-Arl-0099 fgenesh2_kg.6__ 415__ AT5G04940.2 Arabidopsis lyrata 72 0.0 906
WERAM-Art-0116 AT5G04940.2 Arabidopsis thaliana 70 0.0 901
WERAM-Thc-0121 EOY19472 Theobroma cacao 55 0.0 664
WERAM-Pot-0004 POPTR_0001s07390.1 Populus trichocarpa 55 0.0 662
WERAM-Prp-0038 EMJ21426 Prunus persica 59 0.0 631
WERAM-Met-0060 KEH32911 Medicago truncatula 52 2e-177 620
WERAM-Viv-0081 VIT_13s0047g00120.t01 Vitis vinifera 60 6e-177 618
WERAM-Glm-0034 GLYMA04G15120.1 Glycine max 51 7e-176 614
WERAM-Sei-0106 Si028938m Setaria italica 52 1e-147 520
WERAM-Sob-0019 Sb02g006620.1 Sorghum bicolor 52 7e-147 518
WERAM-Orp-0070 OPUNC07G07250.1 Oryza punctata 49 1e-146 517
WERAM-Orl-0082 KN539783.1_FGP008 Oryza longistaminata 50 2e-146 516
WERAM-Org-0110 ORGLA11G0160500.1 Oryza glaberrima 50 2e-146 516
WERAM-Orb-0118 OBART11G19080.1 Oryza barthii 50 2e-146 516
WERAM-Ors-0105 OS11T0602200-01 Oryza sativa 50 2e-146 516
WERAM-Orr-0118 ORUFI11G20440.1 Oryza rufipogon 50 2e-146 516
WERAM-Zem-0004 AC233961.1_FGP001 Zea mays 52 3e-146 516
WERAM-Orni-0117 ONIVA11G18710.1 Oryza nivara 50 3e-145 513
WERAM-Tra-0156 Traes_4DL_7DA2A133B.1 Triticum aestivum 50 5e-145 512
WERAM-Orbr-0036 OB0348G10010.1 Oryza brachyantha 50 1e-144 510
WERAM-Brd-0028 BRADI1G53840.1 Brachypodium distachyon 51 2e-144 510
WERAM-Hov-0083 MLOC_63544.1 Hordeum vulgare 50 2e-144 509
WERAM-Orgl-0113 OGLUM11G18450.2 Oryza glumaepatula 49 8e-144 508
WERAM-Aet-0087 EMT20679 Aegilops tauschii 51 5e-141 499
WERAM-Sot-0021 PGSC0003DMT400018511 Solanum tuberosum 51 3e-140 496
WERAM-Sol-0126 Solyc10g077070.1.1 Solanum lycopersicum 51 4e-140 495
WERAM-Ori-0115 BGIOSGA033726-PA Oryza indica 53 5e-138 489
WERAM-Orm-0054 OMERI05G19070.1 Oryza meridionalis 48 6e-135 478
WERAM-Lep-0057 LPERR05G16930.1 Leersia perrieri 49 2e-134 476
WERAM-Tru-0079 TRIUR3_29078-P1 Triticum urartu 45 1e-133 474
WERAM-Amt-0085 ERM98215 Amborella trichopoda 44 1e-116 418
WERAM-Sem-0004 EFJ22703 Selaginella moellendorffii 38 4e-81 300
WERAM-Php-0129 PP1S9_150V6.1 Physcomitrella patens 38 3e-80 297
Created Date 25-Jun-2016