WERAM Information

Tag Content
WERAM ID WERAM-Brr-0142
Ensembl Protein ID Bra028643.1-P
Gene Name SRT2
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra028643 Bra028643.1 Bra028643.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC SIR2 5.60e-73 246.5 68 349
Organism Brassica rapa
Domain Profile
  HDAC SIR2
       SIR2.txt   2 klakllkkskkivvltGAGiStsaGIPDFRsseGlysklkkeelpspeaifdldffrkdpkv..fyalakelyp.lgsakPtktHyflaelekkgk 94 
                    kl++l+++sk++++ltGAGiSt++GIPD+Rs++G ys+        +++i++++f+r+++++  ++a++++ ++ + +a+P ++H++la+le++g+
  Bra028643.1-P  68 KLYQLFEQSKRLTILTGAGISTECGIPDYRSPNGAYSS-------GFKPITHQEFTRSSRSRrrYWARSYAGWRrFAAAQPGPAHTALASLERAGR 156
                    7899*********************************9.......5899********9998889******************************** PP
       SIR2.txt  95 llrlytQNiDgLerkaglkedklvelHGslatasCtkCkkefpreeikeklkak.......................................... 148
                    +  ++tQN+D+L+++ag++    +elHG+++t++C++C+ +fpr+ ++++lka                                           
  Bra028643.1-P 157 IDCIITQNVDRLHHRAGSD---PLELHGTVYTVMCLDCGFSFPRDLFQDQLKALnpkwaealesidhgepgsektfgmkqrpdgdieidekfweeg 249
                    ******************6...9******************************9****************************************** PP
       SIR2.txt 149 ekvpkCekCkgvlkpdivffgenlpeefleeveedlkeadlllvlGtSlkvepvaslvkkavkkkvpvllvnleevkadkladlkllgdcdevvee 244
                    +++p+CekC+gvlkpd++ffg+n+p+e++++++e++k++d++lvlG+Sl+ +++++lv++a+++++++++vn++ ++ad+++ lk++++++e++ +
  Bra028643.1-P 250 FNIPVCEKCQGVLKPDVIFFGDNIPKERATQAMEAAKQSDAFLVLGSSLMTMSAFRLVRAAHEAGAMTAIVNIGVTRADDIVPLKISARVGEILPR 345
                    9**********************************************************************************************9 PP
       SIR2.txt 245 llkl 248
                    +l+ 
  Bra028643.1-P 346 VLDV 349
                    9875 PP
Protein Sequence
(Fasta)		MFTMCQPLRS KANLVMLFKG YRRFVRTTCR VSIPGGSLGN ELKAPPRFLR DKKIVPDADP 60
PHKEDIHKLY QLFEQSKRLT ILTGAGISTE CGIPDYRSPN GAYSSGFKPI THQEFTRSSR 120
SRRRYWARSY AGWRRFAAAQ PGPAHTALAS LERAGRIDCI ITQNVDRLHH RAGSDPLELH 180
GTVYTVMCLD CGFSFPRDLF QDQLKALNPK WAEALESIDH GEPGSEKTFG MKQRPDGDIE 240
IDEKFWEEGF NIPVCEKCQG VLKPDVIFFG DNIPKERATQ AMEAAKQSDA FLVLGSSLMT 300
MSAFRLVRAA HEAGAMTAIV NIGVTRADDI VPLKISARVG EILPRVLDVG SLGVPAV 357
Nucleotide Sequence
(Fasta)		ATGTTCACCA TGTGTCAACC ACTTCGGTCT AAGGCAAACT TAGTGATGCT GTTTAAAGGA 60
TATAGACGGT TTGTGAGAAC AACATGCCGA GTTTCAATCC CTGGAGGTTC TTTGGGAAAC 120
GAATTAAAAG CACCTCCAAG GTTTCTTAGG GATAAAAAAA TAGTTCCTGA TGCTGATCCT 180
CCTCATAAAG AAGATATCCA CAAGCTCTAT CAACTTTTTG AGCAAAGTAA AAGACTCACC 240
ATCTTGACTG GAGCTGGGAT TAGCACTGAA TGTGGCATCC CTGATTACAG GAGTCCCAAT 300
GGAGCATATA GTTCTGGTTT CAAACCAATT ACCCACCAGG AATTCACTAG ATCAAGCAGA 360
TCTCGTAGGC GGTATTGGGC AAGGAGTTAT GCTGGATGGA GACGGTTCGC TGCAGCACAG 420
CCAGGTCCAG CTCATACTGC TTTAGCATCA CTAGAGAGAG CTGGACGAAT TGATTGTATC 480
ATAACGCAAA ACGTTGACAG GTTGCATCAT CGTGCTGGGA GTGATCCGCT TGAGTTACAC 540
GGTACAGTGT ATACTGTTAT GTGCTTAGAT TGTGGCTTCT CTTTTCCTCG AGACTTGTTT 600
CAGGATCAGC TTAAAGCTCT CAATCCTAAG TGGGCTGAAG CGTTAGAAAG TATTGATCAT 660
GGAGAACCAG GATCAGAGAA GACCTTTGGC ATGAAACAAA GGCCTGATGG TGATATTGAG 720
ATTGACGAGA AGTTTTGGGA AGAAGGTTTT AATATACCAG TATGTGAGAA GTGCCAAGGA 780
GTATTAAAAC CTGATGTAAT TTTCTTTGGA GACAATATCC CAAAGGAGAG AGCTACTCAA 840
GCAATGGAAG CTGCGAAACA GAGCGACGCA TTTCTAGTGT TGGGTTCGTC TTTGATGACA 900
ATGTCTGCTT TTCGTCTTGT CAGAGCGGCT CATGAAGCTG GTGCAATGAC TGCAATTGTG 960
AATATAGGTG TTACCAGAGC TGATGATATT GTTCCTTTGA AAATCAGTGC AAGGGTTGGT 1020
GAGATATTAC CCAGAGTTCT TGATGTGGGA TCACTCGGTG TCCCAGCTGT ATAG 1075
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0024 Bo2g009270.1 Brassica oleracea 98 0.0 677
WERAM-Art-0118 AT5G09230.7 Arabidopsis thaliana 90 6e-180 627
WERAM-Arl-0027 fgenesh1_pg.C_scaffold_6000741 Arabidopsis lyrata 91 3e-178 621
WERAM-Thc-0008 EOX92647 Theobroma cacao 75 4e-146 514
WERAM-Prp-0069 EMJ12669 Prunus persica 75 2e-144 509
WERAM-Pot-0061 POPTR_0005s06930.1 Populus trichocarpa 74 3e-140 495
WERAM-Glm-0041 GLYMA04G38730.1 Glycine max 73 2e-138 489
WERAM-Met-0074 AES72910 Medicago truncatula 72 3e-138 488
WERAM-Viv-0046 VIT_07s0031g02510.t01 Vitis vinifera 73 2e-137 486
WERAM-Sot-0097 PGSC0003DMT400082473 Solanum tuberosum 72 8e-129 457
WERAM-Sol-0062 Solyc04g009430.2.1 Solanum lycopersicum 72 2e-128 456
WERAM-Amt-0023 ERN08785 Amborella trichopoda 70 2e-121 432
WERAM-Sei-0033 Si009965m Setaria italica 69 7e-120 427
WERAM-Orl-0007 KN538685.1_FGP039 Oryza longistaminata 64 2e-119 426
WERAM-Sob-0114 Sb08g004900.1 Sorghum bicolor 68 8e-119 424
WERAM-Orp-0109 OPUNC12G04720.1 Oryza punctata 69 1e-118 423
WERAM-Ors-0107 OS12T0179800-01 Oryza sativa 69 2e-118 422
WERAM-Orm-0102 OMERI12G03010.1 Oryza meridionalis 69 4e-118 421
WERAM-Ori-0126 BGIOSGA036526-PA Oryza indica 69 1e-117 420
WERAM-Orr-0119 ORUFI12G05460.1 Oryza rufipogon 69 1e-117 420
WERAM-Brd-0118 BRADI4G41127.1 Brachypodium distachyon 68 2e-117 419
WERAM-Mua-0095 GSMUA_Achr6P25880_001 Musa acuminata 70 3e-117 419
WERAM-Orbr-0122 OB12G14620.1 Oryza brachyantha 68 5e-117 418
WERAM-Tra-0230 Traes_5DL_84C49FB59.2 Triticum aestivum 67 2e-116 416
WERAM-Lep-0113 LPERR12G04350.1 Leersia perrieri 68 4e-116 415
WERAM-Aet-0050 EMT19694 Aegilops tauschii 62 1e-114 409
WERAM-Zem-0150 GRMZM5G807054_P01 Zea mays 65 4e-113 405
WERAM-Orni-0118 ONIVA12G04440.1 Oryza nivara 71 2e-105 379
WERAM-Orgl-0114 OGLUM12G05580.1 Oryza glumaepatula 71 2e-105 379
WERAM-Php-0025 PP1S15_90V6.1 Physcomitrella patens 61 2e-101 366
WERAM-Sem-0074 EFJ28669 Selaginella moellendorffii 55 6e-85 311
WERAM-Chr-0008 EDP00705 Chlamydomonas reinhardtii 49 2e-58 223
WERAM-Lac-0179 ENSLACP00000020887.1 Latimeria chalumnae 45 3e-58 223
WERAM-Orc-0113 ENSOCUP00000009744.3 Oryctolagus cuniculus 43 1e-56 217
WERAM-Ict-0083 ENSSTOP00000008774.2 Ictidomys tridecemlineatus 42 1e-56 217
WERAM-Caj-0096 ENSCJAP00000015889.2 Callithrix jacchus 45 2e-56 217
WERAM-Otg-0098 ENSOGAP00000008496.1 Otolemur garnettii 44 2e-56 217
WERAM-Caf-0113 ENSCAFP00000015057.3 Canis familiaris 45 2e-56 216
WERAM-Bot-0183 ENSBTAP00000028210.3 Bos taurus 44 2e-56 216
WERAM-Ova-0127 ENSOARP00000012850.1 Ovis aries 44 3e-56 216
WERAM-Paa-0081 ENSPANP00000005490.1 Papio anubis 43 4e-56 216
WERAM-Chs-0026 ENSCSAP00000015768.1 Chlorocebus sabaeus 43 4e-56 215
WERAM-Tas-0026 ENSTSYP00000002962.1 Tarsius syrichta 42 1e-55 214
WERAM-Mup-0031 ENSMPUP00000003126.1 Mustela putorius furo 44 2e-55 213
WERAM-Mum-0098 ENSMUSP00000107697.1 Mus musculus 42 2e-55 213
WERAM-Poa-0046 ENSPPYP00000005727.2 Pongo abelii 44 2e-55 213
WERAM-Fec-0171 ENSFCAP00000020847.1 Felis catus 44 3e-55 213
WERAM-Gog-0207 ENSGGOP00000025620.1 Gorilla gorilla 44 3e-55 213
WERAM-Ran-0010 ENSRNOP00000001523.4 Rattus norvegicus 42 3e-55 212
WERAM-Aim-0062 ENSAMEP00000005483.1 Ailuropoda melanoleuca 44 4e-55 212
WERAM-Chh-0046 ENSCHOP00000005172.1 Choloepus hoffmanni 45 4e-55 212
WERAM-Pat-0044 ENSPTRP00000009383.4 Pan troglodytes 44 5e-55 212
WERAM-Pes-0110 ENSPSIP00000013404.1 Pelodiscus sinensis 43 7e-55 211
WERAM-Sus-0071 ENSSSCP00000010568.2 Sus scrofa 43 7e-55 211
WERAM-Hos-0046 ENSP00000202967.4 Homo sapiens 44 8e-55 211
WERAM-Ocp-0148 ENSOPRP00000015399.1 Ochotona princeps 40 9e-55 211
WERAM-Cap-0138 ENSCPOP00000011117.2 Cavia porcellus 42 9e-55 211
WERAM-Xet-0032 ENSXETP00000009271.1 Xenopus tropicalis 42 4e-54 209
WERAM-Eqc-0095 ENSECAP00000011260.1 Equus caballus 42 9e-54 207
WERAM-Meg-0094 ENSMGAP00000009092.2 Meleagris gallopavo 43 2e-53 207
WERAM-Fia-0095 ENSFALP00000007922.1 Ficedula albicollis 42 4e-53 205
WERAM-Loa-0028 ENSLAFP00000001879.2 Loxodonta africana 42 5e-53 205
WERAM-Gaga-0078 ENSGALP00000011706.4 Gallus gallus 43 8e-53 204
WERAM-Tag-0120 ENSTGUP00000009802.1 Taeniopygia guttata 42 8e-53 204
WERAM-Sah-0071 ENSSHAP00000008646.1 Sarcophilus harrisii 43 1e-52 204
WERAM-Ora-0041 ENSOANP00000006568.2 Ornithorhynchus anatinus 43 2e-52 203
WERAM-Drm-0032 FBpp0070817 Drosophila melanogaster 44 3e-52 202
WERAM-Anp-0117 ENSAPLP00000013436.1 Anas platyrhynchos 43 2e-51 200
WERAM-Cii-0061 ENSCINP00000027422.2 Ciona intestinalis 40 3e-51 199
WERAM-Nol-0169 ENSNLEP00000018942.2 Nomascus leucogenys 44 6e-51 198
WERAM-Asm-0019 ENSAMXP00000002317.1 Astyanax mexicanus 39 5e-50 195
WERAM-Dar-0026 ENSDARP00000027611.6 Danio rerio 41 1e-49 194
WERAM-Soa-0051 ENSSARP00000004940.1 Sorex araneus 40 4e-49 192
WERAM-Gam-0012 ENSGMOP00000001231.1 Gadus morhua 42 5e-49 192
WERAM-Pem-0012 ENSPMAP00000001780.1 Petromyzon marinus 42 7e-49 191
WERAM-Anc-0024 ENSACAP00000002561.3 Anolis carolinensis 43 1e-48 191
WERAM-Pof-0223 ENSPFOP00000018246.2 Poecilia formosa 41 2e-48 189
WERAM-Gaa-0017 ENSGACP00000001945.1 Gasterosteus aculeatus 41 4e-48 189
WERAM-Ptv-0014 ENSPVAP00000002101.1 Pteropus vampyrus 41 6e-48 188
WERAM-Tar-0187 ENSTRUP00000038866.1 Takifugu rubripes 40 9e-48 187
WERAM-Xim-0194 ENSXMAP00000015621.1 Xiphophorus maculatus 40 1e-47 187
WERAM-Ect-0086 ENSETEP00000009903.1 Echinops telfairi 41 4e-47 186
WERAM-Orla-0208 ENSORLP00000024753.1 Oryzias latipes 40 5e-47 185
WERAM-Orn-0178 ENSONIP00000018093.1 Oreochromis niloticus 40 3e-46 183
WERAM-Tut-0072 ENSTTRP00000005343.1 Tursiops truncatus 43 4e-44 176
WERAM-Dan-0155 ENSDNOP00000033669.1 Dasypus novemcinctus 45 2e-43 173
WERAM-Cae-0023 F46G10.7a Caenorhabditis elegans 39 9e-43 171
WERAM-Tub-0044 ENSTBEP00000005291.1 Tupaia belangeri 39 5e-42 169
WERAM-Ten-0147 ENSTNIP00000015282.1 Tetraodon nigroviridis 31 1e-21 101
WERAM-Mod-0008 ENSMODP00000000983.1 Monodelphis domestica 27 1e-21 101
WERAM-Mam-0185 ENSMMUP00000026241.2 Macaca mulatta 27 2e-21 100
WERAM-Myl-0098 ENSMLUP00000007946.2 Myotis lucifugus 28 2e-21 100
WERAM-Org-0043 ORGLA04G0042700.1 Oryza glaberrima 28 2e-20 97.4
WERAM-Ere-0059 ENSEEUP00000005136.1 Erinaceus europaeus 26 6e-18 89.0
WERAM-Mae-0123 ENSMEUP00000012391.1 Macropus eugenii 25 6e-18 89.0
WERAM-Fuo-0021 FOXG_06023P0 Fusarium oxysporum 29 1e-17 88.2
WERAM-Scs-0014 EDN99996 Sclerotinia sclerotiorum 28 1e-17 88.2
WERAM-Asg-0028 AAS54472 Ashbya gossypii 26 6e-17 85.9
WERAM-Kll-0027 CAG98291 Kluyveromyces lactis 29 7e-17 85.5
WERAM-Miv-0014 MVLG_02300T0 Microbotryum violaceum 28 3e-16 83.6
WERAM-Dio-0050 ENSDORP00000004937.1 Dipodomys ordii 26 3e-16 83.6
WERAM-Cis-0081 ENSCSAVP00000017799.1 Ciona savignyi 26 3e-16 83.6
WERAM-Asfu-0001 CADAFUAP00000229 Aspergillus fumigatus 27 4e-16 83.2
WERAM-Scj-0035 EEB09012 Schizosaccharomyces japonicus 26 1e-15 81.6
WERAM-Coi-0012 EAS36287 Coccidioides immitis 26 1e-15 81.3
WERAM-Asn-0020 CADANIAP00005090 Aspergillus nidulans 27 2e-15 80.9
WERAM-Mao-0040 MGG_17827T0 Magnaporthe oryzae 29 2e-15 80.5
WERAM-Cag-0026 CAG62123 Candida glabrata 27 3e-15 80.1
WERAM-Trv-0037 EHK18208 Trichoderma virens 26 7e-15 79.0
WERAM-Trr-0018 EGR46788 Trichoderma reesei 26 7e-15 79.0
WERAM-Nec-0006 EFNCRP00000000764 Neurospora crassa 27 9e-15 78.6
WERAM-Chg-0039 EAQ84978 Chaetomium globosum 27 9e-15 78.6
WERAM-Ast-0032 CADATEAP00008928 Aspergillus terreus 25 2e-14 77.8
WERAM-Leo-0013 ENSLOCP00000002849.1 Lepisosteus oculatus 27 2e-14 77.0
WERAM-Aso-0010 CADAORAP00001539 Aspergillus oryzae 26 3e-14 77.0
WERAM-Asf-0008 CADAFLAP00002195 Aspergillus flavus 26 3e-14 77.0
Created Date 25-Jun-2016