WERAM Information

Tag Content
WERAM ID WERAM-Brr-0130
Ensembl Protein ID Bra026155.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra026155 Bra026155.1 Bra026155.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Me_Reader_other 1.00e-112 401
Organism Brassica rapa
Domain Profile
  Me_Reader Me_Reader_other
Query: 1   MDAPEDSSHYFTDFTLAEIVDMETLFKELGDQSLLKDFCQTVASSFSCSVNRKGKSSITW 60
           M A +DSSHYFT+FTL+EIVDME L+KELGDQSL KDFCQTVAS+FSCSVNR GKSSITW
Sbjct: 1   MAASDDSSHYFTEFTLSEIVDMENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITW 60
Query: 61  KQVQGWFQGSLEKQNQPKFKTAPSSPLLIVDLSNPGGVRDAGSPETVT---------YGK 111
           KQVQ WFQ  L+ Q+QPK KT PS PL I DLSNP       S  T            GK
Sbjct: 61  KQVQIWFQEKLKHQSQPKSKTLPSPPLQIHDLSNPSSYASNASNATFVGNSTFVQTRKGK 120
Query: 112 ASDVSDLAFEAKSARDDAWYDVASFMTYRYLRTGELEVRVRFSGFDNQHDEWVNVQTSVR 171
           ASD++DLAFEAKSARD AWYDV+SF+TYR LRTGELEVRVRFSGFDN+HDEWVNV+TSVR
Sbjct: 121 ASDLADLAFEAKSARDYAWYDVSSFLTYRVLRTGELEVRVRFSGFDNRHDEWVNVKTSVR 180
Query: 172 ERSIPVEPSECGRVKVGDLLLCFQDREDEALYCDAHVVNIKRGVHDHRSCNCVFVVRYEF 231
           ERSIPVEPSECGRV VGDLLLCFQ+RED+ALYCD HV+NIKRG+HDH  CNCVF+VRYE 
Sbjct: 181 ERSIPVEPSECGRVNVGDLLLCFQEREDQALYCDGHVLNIKRGIHDHARCNCVFLVRYEL 240
Query: 232 DGTEETLGLESICRRPD 248
           D TEE+LGLE ICRRP+
Sbjct: 241 DNTEESLGLERICRRPE 257
Protein Sequence
(Fasta)		MDAPEDSSHY FTDFTLAEIV DMETLFKELG DQSLLKDFCQ TVASSFSCSV NRKGKSSITW 60
KQVQGWFQGS LEKQNQPKFK TAPSSPLLIV DLSNPGGVRD AGSPETVTYG KASDVSDLAF 120
EAKSARDDAW YDVASFMTYR YLRTGELEVR VRFSGFDNQH DEWVNVQTSV RERSIPVEPS 180
ECGRVKVGDL LLCFQDREDE ALYCDAHVVN IKRGVHDHRS CNCVFVVRYE FDGTEETLGL 240
ESICRRPDSE E 251
Nucleotide Sequence
(Fasta)		ATGGATGCTC CCGAAGATTC CTCCCACTAT TTCACCGATT TCACATTGGC CGAGATTGTA 60
GACATGGAGA CTCTGTTCAA GGAGCTCGGT GATCAGTCTC TCCTCAAAGA CTTTTGTCAA 120
ACTGTTGCCT CCTCTTTTAG TTGCTCAGTG AACCGGAAGG GAAAATCATC AATAACATGG 180
AAACAAGTAC AGGGTTGGTT TCAGGGGAGT TTAGAGAAGC AGAACCAACC AAAATTCAAG 240
ACTGCGCCAT CTTCCCCTTT GCTGATTGTT GACTTATCAA ATCCCGGTGG TGTCAGAGAT 300
GCTGGAAGTC CTGAAACTGT TACCTATGGT AAGGCCTCTG ATGTATCTGA TCTCGCTTTT 360
GAGGCTAAAT CTGCAAGGGA TGACGCGTGG TATGACGTGG CATCGTTCAT GACTTATAGA 420
TATCTTCGCA CTGGTGAACT GGAAGTGCGT GTCCGGTTTT CTGGGTTCGA CAACCAACAC 480
GATGAGTGGG TGAACGTGCA AACGTCAGTG CGTGAGCGGT CTATTCCTGT AGAACCATCA 540
GAGTGTGGGA GAGTGAAGGT TGGAGATCTG CTTCTGTGTT TTCAGGATAG GGAGGATGAA 600
GCACTGTACT GTGATGCTCA TGTTGTGAAT ATCAAGAGAG GGGTTCATGA TCACAGGAGT 660
TGTAACTGCG TGTTTGTTGT TCGCTACGAG TTTGACGGTA CAGAGGAAAC GCTGGGACTT 720
GAAAGTATTT GCCGTCGTCC TGATTCTGAA GAGTGA 757
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0092 Bo5g020650.1 Brassica oleracea 97 4e-145 510
WERAM-Art-0011 AT1G15215.2 Arabidopsis thaliana 75 4e-112 401
WERAM-Arl-0017 fgenesh1_pg.C_scaffold_1001378 Arabidopsis lyrata 69 4e-107 384
WERAM-Thc-0076 EOY26911 Theobroma cacao 54 2e-73 272
WERAM-Pot-0006 POPTR_0001s19000.1 Populus trichocarpa 53 6e-69 257
WERAM-Viv-0062 VIT_09s0002g03660.t01 Vitis vinifera 50 3e-67 252
WERAM-Met-0171 KEH18213 Medicago truncatula 45 9e-58 220
WERAM-Glm-0091 GLYMA08G21560.5 Glycine max 44 1e-57 220
WERAM-Sot-0007 PGSC0003DMT400006487 Solanum tuberosum 41 5e-55 211
WERAM-Sol-0058 Solyc03g120940.2.1 Solanum lycopersicum 42 4e-54 208
WERAM-Orni-0098 ONIVA09G05900.1 Oryza nivara 40 2e-49 192
WERAM-Ori-0106 BGIOSGA029938-PA Oryza indica 40 2e-49 192
WERAM-Org-0096 ORGLA09G0048600.1 Oryza glaberrima 40 4e-49 192
WERAM-Prp-0090 EMJ17222 Prunus persica 63 4e-49 191
WERAM-Orr-0103 ORUFI09G07320.1 Oryza rufipogon 40 4e-49 191
WERAM-Orbr-0105 OB09G14330.1 Oryza brachyantha 42 4e-49 191
WERAM-Orgl-0096 OGLUM09G07230.2 Oryza glumaepatula 40 8e-49 191
WERAM-Orm-0090 OMERI09G05210.2 Oryza meridionalis 40 1e-47 186
WERAM-Orb-0100 OBART09G06730.1 Oryza barthii 39 2e-44 176
Created Date 25-Jun-2016